| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 251,254 | T→G | 9.5% | intergenic (‑52/‑14) | nfeD ← / → PP_0201 | membrane bound peptidase NefD/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 251,254 | 0 | T | G | 9.5% | 800.0 / 9.7 | 318 | intergenic (‑52/‑14) | nfeD/PP_0201 | membrane bound peptidase NefD/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (112/165); new base G (39/2); total (151/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.06e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 319 total aligned reads displayed.
TGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGCCCGTA > NC_002947/251106‑251403 | cAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCg < 1:6480944/150‑1 (MQ=255) cAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCg < 2:4411708/150‑1 (MQ=255) gCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCGACCCGGc > 2:1930360/1‑150 (MQ=255) cACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCCCCCCTACCCGGcc > 1:1336961/1‑150 (MQ=255) ccACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCCCCCCGACCCCGCCGaa > 1:2899886/1‑150 (MQ=255) cacaCCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCGGACCCGGCCGaaa > 2:2425600/1‑150 (MQ=255) acacCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCCCCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCCCCCCGACCCCGccgcaaa > 2:2157536/1‑145 (MQ=255) acacCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTaaaa < 1:5594855/150‑1 (MQ=255) cacCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCCCCCGGACCCCGCCGAAAAt > 2:1739118/1‑150 (MQ=255) gtggcCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTCTTACACAAGTTTAGCCCCGCCCACCCGGACCCGGCCGAAAAATgg > 2:5287933/4‑150 (MQ=255) cgcgCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTgg < 2:861554/150‑1 (MQ=255) cgcgCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTgg < 1:4981048/150‑1 (MQ=255) cgcgCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTgg < 2:6167111/150‑1 (MQ=255) cgcgCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTACCCGGCCGaaaaattg > 1:1242368/1‑146 (MQ=255) gcgcCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGga < 2:3563504/150‑1 (MQ=255) gcgcCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGga < 2:5863661/150‑1 (MQ=255) gcgcTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTggg < 1:6211013/150‑1 (MQ=255) gcgcTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTggg < 1:698729/150‑1 (MQ=255) gcgcTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTggg < 1:809984/150‑1 (MQ=255) gcgcTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTggg < 1:1012280/150‑1 (MQ=255) gcTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTggggg < 1:407761/150‑1 (MQ=255) tGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCTACCCCGCCGAAAAATGGAGATTGGGGGGc > 1:1939663/1‑150 (MQ=255) gCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACCCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGGAACCCGCCAAAAAATGGGGATTGGGGGGCg > 1:1458952/1‑150 (MQ=255) cTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCGCCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTACCCGGCCGAAAATTGGAGATTGGGGGGCGaa > 2:3638858/1‑150 (MQ=255) tGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATGTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCCGACCCCGCCGAAAAGTGGAGATGGGGGGGCgccc > 2:2353060/1‑147 (MQ=255) ccACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCg < 1:577950/150‑1 (MQ=255) cACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCgg < 1:429230/150‑1 (MQ=255) ccTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAg < 2:1578621/150‑1 (MQ=255) ccTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAg < 2:208263/150‑1 (MQ=255) ccTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAg < 2:771417/150‑1 (MQ=255) cTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAgg < 1:2254832/150‑1 (MQ=255) cTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCGAAAATTGGAGATTGGGGGGCGAAACCGGAgg > 2:123207/1‑150 (MQ=255) tGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGt < 2:1408309/150‑1 (MQ=255) tGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGt < 2:6858228/150‑1 (MQ=255) gCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGc < 2:6075026/150‑1 (MQ=255) cGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCGAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGca > 1:6821903/1‑150 (MQ=255) gTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGcat < 1:5622480/150‑1 (MQ=255) ccAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTCCCCCGCCGAAAATTGGAGATTGGGGGGCGAAACCCGAGGTGCATCAAGCg > 2:5464002/1‑150 (MQ=255) cAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGt > 2:6620615/1‑150 (MQ=255) cAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGt < 2:4896334/150‑1 (MQ=255) aaGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTa < 2:5319271/150‑1 (MQ=255) aaGCAACAAAAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTa < 2:1822914/150‑1 (MQ=255) caacaaCAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATgg < 2:2381858/150‑1 (MQ=255) acaacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCa < 1:6434328/150‑1 (MQ=255) acaacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCGCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCGGACCCCGCCCAAAATAGGAGATTGGGGGGCGAAACCCGCGGGGCATAAAGCGGATTGCa > 1:3624413/1‑150 (MQ=255) aacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCaaa < 1:4498430/150‑1 (MQ=255) aacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTACCCGGCCGAAAATTGGCGATTGGGGGGCGAAACCCGCGGTGCATCATGCGTATGGCaaa > 2:5517208/1‑150 (MQ=255) aacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCCTAACCCGCCGAAAAATGGGGATTTGGGGGCGAAAACGGAGGTGCATCATGCGTATTGCcaa > 1:1397801/1‑150 (MQ=255) aacaGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCACCCTAACCCGCCTAAAAATTGAGTTTGGGGGGCGAAAACCGAGGTGCATAAAGCCTATGGCaaa > 1:6731903/1‑150 (MQ=255) cagcagCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGa < 2:471225/150‑1 (MQ=255) gcagcaACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGAcc < 1:2583271/150‑1 (MQ=255) agcaACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCt < 2:4773181/150‑1 (MQ=255) caACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCCCCCCGACCCGGCCGAAAATTGGAGCTTGGGGGGCGAAACCGGAGGTGCATCCGGCGGATGGCCCAGACCCCGc > 2:1787249/1‑150 (MQ=255) caACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGc < 1:1592236/150‑1 (MQ=255) caACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTACCCGGCCGAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCAGc > 2:4866202/1‑150 (MQ=255) aaCAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCa < 2:6274868/150‑1 (MQ=255) aaCAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCa > 2:5114361/1‑150 (MQ=255) aCAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAg < 2:248367/150‑1 (MQ=255) ccAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCa < 1:4630056/150‑1 (MQ=255) ccAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCa < 2:5365553/150‑1 (MQ=255) ccAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCTAACCCGCCAAAAAATTGAGGTTGGGGGGCGCAACCCGAGGTGCAACATTCGTATTGCAAAGACCCGGCAGGCCa > 1:5599426/1‑150 (MQ=255) ccAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCGAACCCGCCTGAAATTGGGGATTGGGGGGCGCAAACGGCGGGGCATCATGCGGATGGCAAAGACCCAGCAGGccc > 1:5889089/1‑149 (MQ=255) gCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTg < 1:4775933/150‑1 (MQ=255) gCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTg < 2:3140408/150‑1 (MQ=255) gCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTAACCGGCCGAAAATTGGGGATTTGGGGGCGAAACCGGGGGTGCAAAATTCGGATTGCAAATACCCAGCAGGCCAcccag > 2:2671904/1‑148 (MQ=255) cagcagCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGa < 1:4026054/150‑1 (MQ=255) agcGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAg < 1:3036936/150‑1 (MQ=255) gcGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAgg < 2:2551413/150‑1 (MQ=255) gcGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAgg < 1:660322/150‑1 (MQ=255) cGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGc < 2:3824682/150‑1 (MQ=255) cGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCGTACCCCGCCTAAAATTGGATATTGGGGGGCGAAACCCGAGGTGCAACAAGCGTAAGGCAAAGAACCAGCAGGCCAGCCAGGACAAGGCCAAc > 1:2768611/1‑150 (MQ=255) aCCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGa < 1:5076489/150‑1 (MQ=255) cTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCCGACCCGGCCGAAAATTGGAGATTGGGGGGCGAAAACGGAGGTGCAAAATTCGTATTGCAAAGAACCAGCAGGCCAGCCAGGACAAGGCCCACAGCGAca > 1:1565291/1‑149 (MQ=255) cTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCCCCCCGACCCCGGCGAAAAATTGAGATTTGGGGGCGAAACCCGCGGGGGATCAAGCGGATTGCCAAGAACCAGCAGGCCACCCAGGGCAACGCCCACATCGAcc > 1:3449824/1‑149 (MQ=255) cTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCTACCCGGCCTAAAATTTGAGCTTGGGGGGCCAAAACGGAGGTGCATAAAGAGTATGGCAAAGACCCGGCAGGCCCCCCAGGACCAGGCCCACAGCGAca > 2:4337663/1‑149 (MQ=255) tGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTa < 1:2685623/150‑1 (MQ=255) tGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTAACCCGCCTAAAAATTGATGTTTGGGGGCGAAAACCGACGTGCATAAAGCGTATGGCAAAAACCCAGCAGGCCACCCAGGAACAGGCCAACAGCGAATa > 2:5788724/1‑150 (MQ=255) cgtcACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGa < 2:3718739/150‑1 (MQ=255) gtcACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGAc < 1:1171195/150‑1 (MQ=255) gtcACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGAc > 2:4550447/1‑150 (MQ=255) tcACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGAca < 1:6147346/150‑1 (MQ=255) aCCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCCTACCCGGCCTAAAAATTGAGATTGGGGGGCGAAACCGGCGGTGCATCATGCGTATTGCAAAAAACCGGCAGGCCAGCCAGGAAAAGGCCAACAGCGACTACGAcaaa > 2:3457664/1‑148 (MQ=255) aCCTCATTTGCGCGTATTACACAAGTTTAGCCCCCCCCACCCCTACCCCGCCGAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATTGCCAAGACCCGGCAGGCCCGCCAGGACAAGGCCAACAGCGACGACGAcaaa > 2:1314029/1‑148 (MQ=255) ccTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGTTTGGGGGGCGAAACCGGCGGTGCATAAAGCGTATTGCAAAGACCCAGCAGGCCAGCCAGGGCAAGGCCAACTGCGGCAACCAcctca > 2:6752340/1‑150 (MQ=255) tCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCGAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATAATGCGTATGGCAAAGACCCAGCAGGCCAGCCAGGACAAGGCCAACTGCGACTACGACAACAtt > 2:665283/1‑150 (MQ=255) cATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTc < 2:1649019/150‑1 (MQ=255) acacAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCg < 2:4032213/150‑1 (MQ=255) acacAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCg < 2:1191005/150‑1 (MQ=255) aaGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCAATACCCACCCACAATCGGcca > 2:3981887/1‑150 (MQ=255) gTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGccacc < 2:6837626/150‑1 (MQ=255) aGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGcc < 2:564951/150‑1 (MQ=255) ccccGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTg < 2:6532080/150‑1 (MQ=255) ccGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGa > 2:3303682/1‑150 (MQ=255) ccGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGa > 2:5042831/1‑150 (MQ=255) ccGCCCACCCGGACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGTCTACGACATCAGTCCCCACCCACATTCGGCCACCAGCCTGGa < 1:5287933/150‑1 (MQ=255) ccACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCg < 2:3960329/150‑1 (MQ=255) aCCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGc < 2:2878538/150‑1 (MQ=255) ccGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGccc > 2:1076994/1‑150 (MQ=255) cGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGCCCg > 1:1687014/1‑150 (MQ=255) tACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGCCCGTa < 1:3741/150‑1 (MQ=255) | TGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCAACGCCAGCAGCGGGCGATCACCTGTCGTCACCTCATTTGCGCGTATTACACAAGTTTAGCCCCGCCCACCCGTACCCGGCCTAAAATTGGAGATTGGGGGGCGAAACCGGAGGTGCATCATGCGTATGGCAAAGACCCTGCAGGCCAGCCTGGACAAGGCCAACTGCGACTACGACATCATTCCCCACCCACATTCGGCCACCAGCCTGGAGTCGGCCCGTA > NC_002947/251106‑251403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |