| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,671,739 | A→T | 5.7% | intergenic (+21/‑45) | acnA‑II → / → prpF | aconitate hydratase/aconitate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,671,739 | 0 | A | T | 5.7% | 831.7 / 25.7 | 246 | intergenic (+21/‑45) | acnA‑II/prpF | aconitate hydratase/aconitate isomerase |
| Reads supporting (aligned to +/- strand): ref base A (106/126); new base T (11/3); total (117/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
Only 100 of 250 total aligned reads displayed.
CGTGCCAATGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAA > NC_002947/2671590‑2671886 | cGTGCCAATGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCaaa < 2:4646716/150‑1 (MQ=255) gTGCCAATGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCcaaa > 1:1739039/1‑149 (MQ=255) tGCCAATGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGc < 1:5238761/150‑1 (MQ=255) gCCAATGGCGAGTGCCTGGAAGTACCGGTGACCAGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCg > 2:723779/1‑150 (MQ=255) aaTGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGcc > 1:3356752/1‑150 (MQ=255) aTGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGccc < 1:6865638/150‑1 (MQ=255) tGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCTTTGCGGcccc < 1:6080253/150‑1 (MQ=255) gAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAggg < 1:4063146/150‑1 (MQ=255) gCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTAtt < 2:4919538/150‑1 (MQ=255) cTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCAAAGCGGCCCCACGGTATTTc > 2:5181369/1‑150 (MQ=255) aaGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCg < 1:4964699/150‑1 (MQ=255) tACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTAACCGGAc > 2:1784955/1‑150 (MQ=255) cGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTATTTAACCCGCCTAt > 1:6377905/1‑150 (MQ=255) gTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGGCGCAAACCGGCCCCAGGGGATTTGACCGGACAATCa > 1:1284537/1‑150 (MQ=255) tGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAg < 2:334884/150‑1 (MQ=255) tGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAg < 2:6759712/150‑1 (MQ=255) aCCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTAAACGGACTATCAGGa > 2:2511596/1‑150 (MQ=255) cTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATg > 2:6248671/1‑150 (MQ=255) cTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATg < 2:84083/150‑1 (MQ=255) cTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAACCGCCCCCCGGTATTTCAACCGGCTAAAAGGATg > 1:811997/1‑150 (MQ=255) tGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTAACCCGACAATAAGGATGc > 2:6036643/1‑150 (MQ=255) gCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGcc < 1:1751401/150‑1 (MQ=255) gCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGcc < 1:5429778/150‑1 (MQ=255) ccGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGccc < 2:3049597/150‑1 (MQ=255) ccGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGGATTTAACCCGACGATCAGGAAGccc > 2:2303177/1‑150 (MQ=255) tCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAg > 2:3320818/1‑150 (MQ=255) tGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGGCGCAAACCGGCCCCCCGGGATTTGACCCGACTATAAGGGTGGCCCAgca > 1:1129260/1‑148 (MQ=255) tGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGaa < 1:4591320/150‑1 (MQ=255) ggACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCCGGGTATTTCACCGGGCTATCAGGATGCCCAAGaac > 2:4049551/1‑149 (MQ=255) gACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCTTTGCGGcc < 1:6242043/111‑1 (MQ=255) acacCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAt < 1:4412207/150‑1 (MQ=255) acCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGt > 2:4041515/1‑150 (MQ=255) acCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTAACCCGACGATCAGGGTGCCCCAGAAAAAGt > 2:2877879/1‑150 (MQ=255) acCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCACAGCGGCCCCAGGGTATTTCACCCGACTATCAGGATGCCCCAGAAAAAGt > 1:2015612/1‑150 (MQ=255) acCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCAAAGAGGCCCCAGGGTATTTAAACGGACTATAAGGATGCCCAAGaaaaatt > 1:2645603/1‑147 (MQ=255) cgccgAGGAAGTGTCGATCTACGTAGCGGGCGGGGTGCTGCAGCGCTTTGACGAGGACTTCCTCGAAGCGACCGCCTGAGCATGATTCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCATGAATATGTca < 2:5124982/150‑1 (MQ=255) cgccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca < 2:2801174/150‑1 (MQ=255) cgccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTca < 2:2646805/150‑1 (MQ=255) cgccgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTATTTCAACCCACAAAAAGGAAGCCCAAGaaaaattaa > 1:2138602/1‑145 (MQ=255) cgAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACAt < 1:4778734/150‑1 (MQ=255) ggAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTAACCGGACTATCAGGATGCCCAAGAAAATGTCACAAGTa > 2:1289658/1‑150 (MQ=255) gAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTAc < 2:2095312/150‑1 (MQ=255) gAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTAc < 1:4330390/150‑1 (MQ=255) gAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATTTCACAAGTAc > 1:3887370/1‑150 (MQ=255) gAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCAAACCGCCCCCAAGGTAAATAAAACGAAAAACATGATGCCCAAAAAAATGTGACATGGAc > 1:2685587/1‑150 (MQ=255) gtgtCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTAcccc < 1:36256/150‑1 (MQ=255) gtCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCCAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACAAGTAACCCAg > 2:3508621/1‑150 (MQ=255) tCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGa < 1:2887626/150‑1 (MQ=255) cGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGAt < 2:3357240/150‑1 (MQ=255) cGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGAt < 1:1934915/150‑1 (MQ=255) gATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATc < 2:3438696/150‑1 (MQ=255) gATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATc > 2:3984879/1‑150 (MQ=255) aTCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCa < 2:6294619/150‑1 (MQ=255) aGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATcccc < 2:132824/150‑1 (MQ=255) aGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATcccc < 2:6636687/150‑1 (MQ=255) gcgggcggGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCg < 2:3080160/150‑1 (MQ=255) cgggcgggGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGc < 2:5556246/150‑1 (MQ=255) ggcgggGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCa < 1:2696930/150‑1 (MQ=255) gcgggGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCAc < 2:4600920/150‑1 (MQ=255) ggggTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCt < 2:5818496/150‑1 (MQ=255) gggTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTa < 1:25102/150‑1 (MQ=255) tgctgcAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACAt < 2:4444498/150‑1 (MQ=255) ctgcAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATcc < 2:4494496/150‑1 (MQ=255) cAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCCAAGCGGCCCCCCGGTATTTAACCGGACTATCAGGATGCCCAACAAAAATTCACAAGTACCCCCGATAAAAAAAACCCCCACCAACaaacccc > 1:3716386/1‑144 (MQ=255) tttGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCa < 2:4679891/150‑1 (MQ=255) tttGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGGATTTGACCGGACAATAAGGATGCCCAAGAAAAAGTGACCAGTTCCCCCCATCAAAATACCCGCCACCCCCCACCGCggcggcc > 1:5852682/1‑149 (MQ=255) cccAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAg > 2:5600110/1‑150 (MQ=255) ccAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAACCGGCCCCAGGGTATTTAACCGGACTAACAGGATGCCCAAGAAAATGTCACAAGTACCCCACAACAAAAACCCCCCCACCAACAACCCCGGCGGCACCacc > 1:3401741/1‑148 (MQ=255) gACGTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAg < 2:6858325/150‑1 (MQ=255) cTTCCTCTAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGTTATTTCACCGGACTATCAGGATGCACAAGAAAATGTCACATGTACACCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGc < 2:3875134/150‑1 (MQ=255) cTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGc < 1:5658014/150‑1 (MQ=255) ttCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGGCGCAAAGCGGCCCCACGGTATTTCAACCGACGATAACGATGGCCCAGAAAAAGTGACAATTACACCACATAAAAATAACCCCCACCAACAAACCCGGCGGCACCACCAAAAGCg > 1:3166700/1‑150 (MQ=255) ttCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAATCGGCCCCACGGTATTTCACCGGACTATCACGATGCCCAAGAAAAAGTCACAAGTAACCCACAACAAAATACCCGCCACCAACAGACGCGGCGGCCCCAGCCAAcgcg > 2:5979112/1‑150 (MQ=255) ttCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCACGGTTTTTGAACCGACAATAAGGGTGCCCCAGAAAAATTCACAAGTAACCCCGATCCAAATACCCCCCCCCAACAAACCCCGCGGCCCCCCCAAAGGCg > 1:6629371/1‑150 (MQ=255) ttCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCCCCAACCCGCCCCACGGGATTTCACCCGACAAACACGAGGCCCAAGAAAAAGTCACAAGGACCCCCCAGCAAAAACCCCCCCCCCAACAACCCCGGCGGCCCCACCCACGGCg > 2:1138168/1‑150 (MQ=255) ccTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCgtg < 2:1896866/150‑1 (MQ=255) cTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCgtgt < 2:963007/150‑1 (MQ=255) tCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATTTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGtt > 2:6106318/1‑150 (MQ=255) gAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCCGGGTATTTCACCCGACTATAAGGATGCCCCATAAAATGTCACATGTACCCCAGATCAAAAACCCCGCCACCTAAATCCGCGGCGGCACCAGCCAAGGCGTGttat > 2:5468981/1‑148 (MQ=255) tGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGAACAAAATCCCCGCCACCAACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCCCCTGCAAg > 2:1097642/1‑150 (MQ=255) aTGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGc < 1:1094231/120‑1 (MQ=255) tGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATTCCCAAGAAAAATTCACATGTACCCCAGAACAAAATACCCCCCACCTACATACGCGGCGGCACCAGCAAAGGCGTGTTATTACGCCGGCAAGACCTGc > 2:2742589/1‑150 (MQ=255) aaTCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGccc < 1:879728/150‑1 (MQ=255) tCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGTCTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATACCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGa > 2:623657/1‑150 (MQ=255) tggggCCGCTTTGCGGCCCCCGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc > 2:1049297/2‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc > 2:2672190/2‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc > 2:4245395/2‑150 (MQ=255) tggggCCGCTTTGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc > 2:3206588/2‑150 (MQ=255) gggggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc < 2:4280472/150‑1 (MQ=255) gggggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGc < 2:1641624/150‑1 (MQ=255) ggggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCa > 1:5162642/1‑150 (MQ=255) ggggCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCa > 1:2205465/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAAt > 2:2077935/1‑54 (MQ=255) gCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgc < 1:969024/150‑1 (MQ=255) gCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgc > 2:2928933/1‑150 (MQ=255) gCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgc < 1:5646333/150‑1 (MQ=255) gCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgc > 2:6783412/1‑150 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCg < 2:1613368/81‑1 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCg > 1:1613368/1‑81 (MQ=255) cGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGgcgc > 2:5373105/1‑150 (MQ=255) | CGTGCCAATGGCGAGTGCCTGGAAGTACCGGTGACCTGCCGTCTGGACACCGCCGAGGAAGTGTCGATCTACGAAGCGGGCGGGGTGCTGCAGCGCTTTGCCCAGGACTTCCTCGAAGCGACCGCCTGAGCATGAATCGGGGGCCGCAAAGCGGCCCCAGGGTATTTCACCGGACTATCAGGATGCCCAAGAAAATGTCACATGTACCCCAGATCAAAATCCCCGCCACCTACATCCGCGGCGGCACCAGCAAAGGCGTGTTCTTCCGCCTGCAAGACCTGCCCGAGCAGGCGCAAA > NC_002947/2671590‑2671886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |