| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,673,062 | T→C | 8.6% | intergenic (+88/‑79) | prpF → / → prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,673,062 | 0 | T | C | 8.6% | 520.9 / 27.0 | 178 | intergenic (+88/‑79) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (66/93); new base C (3/12); total (71/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.09e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
TGAGCCGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACG > NC_002947/2672913‑2673210 | tGAGCCGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAAt < 2:4583029/150‑1 (MQ=255) gCCGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCt < 2:2314355/150‑1 (MQ=255) ccGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtg < 2:1033741/150‑1 (MQ=255) cGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgt < 1:1304432/150‑1 (MQ=255) cGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgt < 2:1785597/150‑1 (MQ=255) cGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgt < 2:1668060/150‑1 (MQ=255) cGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgt < 1:4105748/150‑1 (MQ=255) cGTAGTGCTCGCGTGCTGATGGAGGGCGGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgt < 2:6429662/150‑1 (MQ=255) gTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCtgtg < 1:5388809/150‑1 (MQ=255) tAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGa < 1:2925446/150‑1 (MQ=255) tAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCGTGGCCGCGCCCCCCCGTG‑AAAACAGGGTTTGGATGCGGTGa > 1:4143562/1‑150 (MQ=255) tAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCGTGCCCCCACCCCCACGTA‑AAACCCGCGGTTGAATGCtgtgt > 1:5192586/1‑149 (MQ=255) aGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGat < 2:2627255/150‑1 (MQ=255) cTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATcc < 2:4808031/150‑1 (MQ=255) tCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACAGGTA‑ATCACAGGGTTTGAAAGCGGTGATATccc > 1:2805447/1‑150 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCt < 1:5752760/150‑1 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCt < 2:3803891/150‑1 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCt < 2:3803938/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 2:1094557/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 2:365617/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgtg < 1:4443408/150‑1 (MQ=255) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGGCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:1509608/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:3788971/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:1710024/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:5085372/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGa < 1:901237/150‑1 (MQ=18) tGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCATGCCCCCGCCCACAGGTA‑AACCCACGGGTTGAATGCTTTGCAATCCCGGTGGGAg > 2:1846836/1‑150 (MQ=255) ttGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCg < 1:3951940/149‑1 (MQ=255) aTGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCg < 1:4922909/150‑1 (MQ=255) aTGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCg < 1:5694320/150‑1 (MQ=18) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:5819465/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 1:5048163/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 1:1743894/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 2:1097132/150‑1 (MQ=255) gCTGGGTTCGCGTGCCTGGCGATAGCTTCTAACGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGc < 1:187420/150‑1 (MQ=255) cTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGcc < 2:6417252/150‑1 (MQ=255) cTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGGGATATACCGGTGGGAGCGGGCAAGcc > 2:1536915/1‑150 (MQ=255) tCGCGTGCGGGGCTATAGCTCCTAAAGCACCAGTGGCGGTCGGCTTCAAGTGGGGCCGCTTTGCGGCCCTTCGGGGGTTTGCCCGCTCCCACTGGTA‑ATCACTGGTTTTGATTGGTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaa < 2:4596375/150‑1 (MQ=37) tCGCGTGCCTGGCGATTGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaa < 2:468351/150‑1 (MQ=255) tCGCGTGCCTGGCGATAGCTTCTACAGCACCACGGGGGCTCGGCTTCAAGCGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGTGCGGGCAAGCCCGCGaa < 2:6526399/150‑1 (MQ=38) cgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTGGGATTAATGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATAACAGGGTTTGATTGCTGTTATTTCCCTTTGGGAGCGGGAAAGCCCGCGAAggg < 2:1403456/150‑1 (MQ=37) gCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCATGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGATCCCACAGTTA‑ATCACAGGTTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTg < 2:5592854/150‑1 (MQ=255) cTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGca > 2:440882/1‑150 (MQ=255) cTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGca > 2:5681013/1‑150 (MQ=255) gATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCCCACGGA‑AAAACCGGGGTTTTATTCGGTGATATACCGGGGGGCGCGGGCCACCCCCCGCAGGGCGGCCcagca > 1:4194442/1‑150 (MQ=255) tCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTGTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACCGGTTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCgg < 2:389690/150‑1 (MQ=255) cTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGATTGCCCGCTCCCACAGTTA‑ATCACAGGTTTTTAATGCTGTTATATCCCTGTGGGTGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGc < 2:4279853/150‑1 (MQ=255) aGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAtt < 2:4538768/150‑1 (MQ=255) caccacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGGGTGCCCGCTCCCCCAGGTC‑ATCAAAGGGGTTGAATTGGGGTTTATACCGGGGGGCGGGGGGCAGCCCGCCAAGGGCGGCACAGCCGCCCCCGCCAGTCt > 1:2713847/1‑150 (MQ=255) caccacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGTTATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAATCt > 1:4496689/1‑150 (MQ=255) cacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCCCACGGA‑ATCCCACGGTTTTAAAGCGGTGATAAACCGGGGGGAGCCGGCAAGCCCCCGAAGGGCGGCACCGCCGCCCCCGCAAGTCGGaa > 2:630003/1‑150 (MQ=255) cacTGGCGCTCGGATTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGATTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 2:1551699/150‑1 (MQ=255) acTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCACAGGGA‑ATCACAGGGTTTGAATGCTGTGATATCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCCGCACTTCTGGAg > 2:2417346/1‑150 (MQ=37) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCAAACGTA‑AACACCGGGTTTGAATGCTGGGATATACCAGTGGGAGCCGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg > 2:2705940/1‑150 (MQ=38) ttCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATg > 2:541535/1‑150 (MQ=255) aaGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCACAGGTA‑ATCACTGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAgc < 2:3950314/150‑1 (MQ=255) ccGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGc > 1:3067913/1‑80 (MQ=255) tttGCGGCCCTCCGCGGGCTTGCCCGCTCCCCCCGTTA‑ATCACCGGTTTTTAATGCTTTTATACCCGTGGGGGAGCGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAc < 1:6018814/150‑1 (MQ=255) ggCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCaa < 2:5712957/150‑1 (MQ=255) ggCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCaa < 2:2247230/150‑1 (MQ=255) gCCCTGCGCGGGCTTGCCCGCTCCCACAGTAA‑AGCACAGGTTTTGATTGTTTTTATACCCCTGTGGGCGGGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAAc < 1:1053987/150‑1 (MQ=255) cTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGCATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGAt > 2:2786025/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGTATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCGCAACGATc > 2:986916/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTATGAAGGGCGCTGGATATGAGCGCCAACGTAGACCTCAACGATc > 2:472685/1‑150 (MQ=255) ttGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGAtt > 2:401593/1‑150 (MQ=255) tGCCCGCTCCCCCAGGTA‑ATCACCGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:5943118/150‑1 (MQ=255) ggCCCGCTCCCCCCGGTA‑ATCCCAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGTTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:6435317/149‑1 (MQ=255) ggCCCGCTCCCCCAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:1597050/149‑1 (MQ=255) gCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc > 1:3233614/1‑150 (MQ=255) cccGCTCCCACAGGTA‑ATCACTGGTTTTTATTGCTGTGATATCCGTGTGGGAGGGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg < 1:4993082/150‑1 (MQ=255) cccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg > 2:3694176/1‑150 (MQ=255) cccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg > 1:4605980/1‑150 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa > 1:5588287/1‑98 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 2:2056663/1‑150 (MQ=255) ccGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCCGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:3572460/1‑150 (MQ=17) gCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGAcc > 2:6145723/1‑150 (MQ=255) tCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 2:3685987/1‑150 (MQ=255) tCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 2:1182953/1‑150 (MQ=255) gcccACCGGTA‑ATCACTGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg < 2:5250274/149‑1 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:5691255/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:3868098/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:6281966/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:3773906/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:6109973/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:2958574/1‑150 (MQ=255) cccaGGTA‑ATCACAGGTTTTGATTGCTGTGCTAGCCCTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTg < 2:2872129/148‑1 (MQ=255) acaGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGc > 2:3140567/1‑150 (MQ=255) agttA‑ACCACTGGGTTTGAATGCTTTCATATCCCTGTGGGAGCGGGCACCCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTa < 1:3784701/147‑1 (MQ=255) ggTA‑ATCACTGGTTTTGAATGCTGTTATATCCCTGTGGGAGCGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTAc < 2:3418373/150‑1 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 1:4979809/135‑1 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa > 2:4979809/1‑135 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc > 1:2483714/1‑136 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc < 2:2483714/136‑1 (MQ=255) aTCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAc > 1:5280554/1‑150 (MQ=255) cactGGGTTTGAAGGCTGTGATCTCCGTGTGGGTGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAccc < 2:5790264/150‑1 (MQ=255) ccggttttGATTGCTGTTATTGCCCGGTGGGTGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 1:5984366/145‑1 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:4713426/1‑150 (MQ=255) tttGATTGCTGTTATATCCCTGTGGTAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa < 2:2980082/150‑1 (MQ=255) ttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGAt > 1:6571937/1‑150 (MQ=255) aTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACg < 2:6789944/150‑1 (MQ=255) | TGAGCCGTAGTGCTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACG > NC_002947/2672913‑2673210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |