| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,673,073 | C→A | 13.4% | intergenic (+99/‑68) | prpF → / → prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,673,073 | 0 | C | A | 13.4% | 510.6 / 39.4 | 175 | intergenic (+99/‑68) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (67/82); new base A (14/12); total (81/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2672925‑2673222 | cTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATcc < 2:4808031/150‑1 (MQ=255) tCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACAGGTA‑ATCACAGGGTTTGAAAGCGGTGATATccc > 1:2805447/1‑150 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCt < 2:3803931/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGTGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 2:6337139/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 2:1094557/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 1:1782804/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgt < 2:2010768/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgtg < 1:6320933/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgtg < 1:4443408/150‑1 (MQ=255) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGGCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:1509608/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 1:1377941/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:1710024/150‑1 (MQ=18) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:5085372/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGa < 1:901237/150‑1 (MQ=18) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGGTTGAATGCAGGGATATCCCTGTGGGAGc > 2:3400154/1‑150 (MQ=255) ttGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCg < 1:3951940/149‑1 (MQ=255) aTGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCg < 1:4922909/150‑1 (MQ=255) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:5819465/150‑1 (MQ=255) aggAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:3923968/149‑1 (MQ=255) gAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGc > 2:3794446/1‑150 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 1:5048163/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 2:1097132/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 1:5715232/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTGTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCaa < 2:1667512/150‑1 (MQ=17) gCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGc < 1:4133586/150‑1 (MQ=255) cTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGcc < 2:6417252/150‑1 (MQ=255) tCGCGTGCGGGGCTATAGCTCCTAAAGCACCAGTGGCGGTCGGCTTCAAGTGGGGCCGCTTTGCGGCCCTTCGGGGGTTTGCCCGCTCCCACTGGTA‑ATCACTGGTTTTGATTGGTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaa < 2:4596375/150‑1 (MQ=37) tCGCGTGCCTGGCGATTGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaa < 2:468351/150‑1 (MQ=255) tCGCGTGCCTGGCGATAGCTTCTACAGCACCACGGGGGCTCGGCTTCAAGCGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGTGCGGGCAAGCCCGCGaa < 2:6526399/150‑1 (MQ=38) tCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaa < 2:1110972/150‑1 (MQ=255) cgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTGGGATTAATGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATAACAGGGTTTGATTGCTGTTATTTCCCTTTGGGAGCGGGAAAGCCCGCGAAggg < 2:1403456/150‑1 (MQ=37) tGCCTGGCGTTAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGTGGGGCCGCTTTGGGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTTAT‑TACCTGTGGGAGCGGGAAAGCCCGCGAAGGGcc < 2:5901815/150‑2 (MQ=14) gCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCATGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGATCCCACAGTTA‑ATCACAGGTTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTg < 2:5592854/150‑1 (MQ=255) cTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGca > 2:5681013/1‑150 (MQ=255) cTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGca > 2:440882/1‑150 (MQ=255) tGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGGGGGAGCGGGCAAGCCCGCGAAGGGCTGcac > 2:3848467/1‑150 (MQ=255) tCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTGTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACCGGTTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCgg < 2:389690/150‑1 (MQ=255) cTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGATTGCCCGCTCCCACAGTTA‑ATCACAGGTTTTTAATGCTGTTATATCCCTGTGGGTGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGc < 2:4279853/150‑1 (MQ=255) aGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAtt < 2:4538768/150‑1 (MQ=255) caccacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGA‑ATAACAGGGTTTGAATGCTGTGATATACCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCt > 1:4496673/1‑150 (MQ=255) cccgggCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 2:1551842/146‑1 (MQ=255) acTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATAACAGGGTTTGTATGCAGTGGAATACCTGTGGGAGCGGGGAATCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAg > 1:6232416/1‑150 (MQ=37) ggCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑AACACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGa < 2:2158485/150‑1 (MQ=255) gcgcTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCACCGGTA‑ATCACAGGGTTTGATTGCTGTGATATCCCTGTGGGAGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAg < 2:3568387/150‑1 (MQ=255) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCAAACGTA‑AACACCGGGTTTGAATGCTGGGATATACCAGTGGGAGCCGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg > 2:2705940/1‑150 (MQ=38) aaGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCACAGGTA‑ATCACTGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAgc < 2:3950314/150‑1 (MQ=255) ggggCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGA‑ATCACAGGGTTTGAATGCTGTGATATCCCGGGGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCACTTCTGGAGGGAGCTGGATATGAGCGCCa > 2:154388/1‑150 (MQ=37) gggCCGCTTTGCGGCCCTTCGCGGGCTTTCCCCCGCCCACAGGGA‑ATCACAGGGTTTGTATGCTGTGTTATACCGGTGGGTGCGGGCCAGCCCGCGCAGGGCGGCACCCCCGCCCCCGCCAGTCTGAAGGGGGCGGGATATGAGGGccca > 1:4788855/1‑148 (MQ=255) gggCCGCTTGGCGGCCCTACGCGGGCTGGCCCGCTCCCCCAGGAA‑AGCCCAGGGTTTGAAGGCGGTGATATCCCTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAGTCTGAAGGGAGCTGGATATGAGCGCCaa < 2:1424457/150‑1 (MQ=37) ccGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGc > 1:3067913/1‑80 (MQ=255) ccGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGc < 2:3067913/80‑1 (MQ=255) ccGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCCCAGGGA‑ATCACAGGGGTTGGATGCGGTGTTATACCAGTGGGGGCGGGCCAGCCCGCCCAGGGGGGCACAGCAGCCCCGGCCAATGTGGAGGGGGCGGGGTATGGGCGCCCACGt > 2:614504/1‑150 (MQ=255) gCCCTGCGCGGGCTTGCCCGCTCCCACAGTAA‑AGCACAGGTTTTGATTGTTTTTATACCCCTGTGGGCGGGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAAc < 1:1053987/150‑1 (MQ=255) ttCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGTATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCGCAACGATc > 2:986916/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTATGAAGGGCGCTGGATATGAGCGCCAACGTAGACCTCAACGATc > 2:472685/1‑150 (MQ=255) tGCCCGCTCCCCCAGGTA‑ATCACCGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:5943118/150‑1 (MQ=255) ggCCCGCTCCCCCCGGTA‑ATCCCAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGTTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:6435317/149‑1 (MQ=255) gccccGCTCCCACCGTAA‑ATCACTGGTTTTTATTCGTTTTATCCCCCTGGGGGCGCGGCCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 1:2965624/148‑1 (MQ=255) gCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCACTTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc > 2:5261322/1‑150 (MQ=255) gCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc > 1:3233614/1‑150 (MQ=255) cccGCTCCCACAGGTA‑ATCACTGGTTTTTATTGCTGTGATATCCGTGTGGGAGGGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg < 1:4993082/150‑1 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa > 1:5588287/1‑98 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 2:5588287/98‑1 (MQ=255) ccGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:5655560/1‑150 (MQ=18) ccGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCCGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:3572460/1‑150 (MQ=17) tCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 2:3685987/1‑150 (MQ=255) tCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 2:1182953/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:2958574/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:4498864/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:5691255/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:3773906/1‑150 (MQ=255) acaGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAAc < 1:2669900/125‑1 (MQ=255) caGGTA‑ATCACTGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCt < 2:2535273/150‑1 (MQ=255) aGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTa < 1:3794446/150‑1 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 1:4979809/135‑1 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa > 2:4979809/1‑135 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc > 1:2483714/1‑136 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc < 2:2483714/136‑1 (MQ=255) a‑aTCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACaaa > 2:6254138/1‑150 (MQ=255) aTCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAc > 1:5280554/1‑150 (MQ=255) cactGGGTTTGATTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAccc < 2:3669953/150‑1 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 1:4698605/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGGGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:2276267/1‑150 (MQ=255) ctgggTTTGTCTGCGGTGATAGCCCTGTGGGAGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 1:5269912/148‑1 (MQ=255) ccggttttGATTGCTGTTATTGCCCGGTGGGTGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 1:5984366/145‑1 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt < 2:5771550/148‑1 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 1:5771550/1‑148 (MQ=255) gggTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCACTTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGc > 2:1741073/1‑150 (MQ=255) ttttattGCTTTTATATCCCTGTGGTAACGGGAAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa < 1:6061616/144‑1 (MQ=255) ttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGAt > 2:2825197/1‑150 (MQ=255) ttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGAt > 1:6571937/1‑150 (MQ=255) aTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACg < 2:6789944/150‑1 (MQ=255) gCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGcc > 1:4297151/1‑150 (MQ=255) cTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:2881827/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:3142393/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:4813391/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:4245801/1‑150 (MQ=255) atatCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGc > 2:1340439/1‑150 (MQ=255) atCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTa > 2:3735660/1‑150 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAcc < 1:1536915/150‑1 (MQ=255) | CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2672925‑2673222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |