| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,303,020 | G→C | 5.1% | G82A (GGT→GCT) | pvdQ → | acyl‑homoserine lactone acylase PvdQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,303,020 | 0 | G | C | 5.1% | 1060.1 / 33.1 | 312 | G82A (GGT→GCT) | pvdQ | acyl‑homoserine lactone acylase PvdQ |
| Reads supporting (aligned to +/- strand): ref base G (155/141); new base C (5/11); total (160/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
GCCGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGG > NC_002947/3302872‑3303169 | cGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtga < 2:1258595/150‑1 (MQ=255) gCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAgcgc > 1:6870988/1‑150 (MQ=255) gCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAgcgc > 2:6068660/1‑150 (MQ=255) ccAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCt < 2:6527090/150‑1 (MQ=255) aGTGCCCAGATCCGCTATCCCCGTTAGGGCGTACCGCATATCGTGGCCTAGGATGAGCGTGGCCTGGGGTATGGCGTCGGCTATGCCTACGCCCAGGACTACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCa < 2:256534/150‑1 (MQ=255) aGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCa < 1:665863/150‑1 (MQ=255) gTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCAc > 1:141125/1‑150 (MQ=255) cccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCACggt < 2:5319844/150‑3 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 1:4459151/1‑150 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 2:4865999/1‑150 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 1:5890945/1‑150 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 1:1599432/1‑150 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 1:15024/1‑150 (MQ=255) tCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCg < 1:4773634/150‑1 (MQ=255) cGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGgc < 2:1062576/150‑1 (MQ=255) cGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGgc < 2:2272229/150‑1 (MQ=255) gCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGgcg > 2:2433163/1‑150 (MQ=255) ataCCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggt > 2:4743732/1‑125 (MQ=255) aCCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAg > 2:6847655/1‑150 (MQ=255) aCCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAg < 1:6188663/150‑1 (MQ=255) cccGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAgg < 2:3632099/150‑1 (MQ=255) ccGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAggg > 1:4935753/1‑150 (MQ=255) cGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGc < 2:3734116/150‑1 (MQ=255) cGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGc > 2:3892269/1‑150 (MQ=255) gTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGTTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGcc < 2:1676442/150‑1 (MQ=255) ttACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCa < 1:3710010/150‑1 (MQ=255) cGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGAc > 1:1878672/1‑150 (MQ=255) cGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCt > 1:5961785/1‑150 (MQ=255) gTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTg < 2:5551587/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 1:5346136/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 1:6466909/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 1:4395801/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 2:5261367/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 1:3916193/150‑1 (MQ=255) cGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagc > 2:2314302/1‑150 (MQ=255) gCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagca > 1:6527329/1‑150 (MQ=255) cATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagcag > 2:5946248/1‑150 (MQ=255) atatCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagcagc < 1:5562418/150‑1 (MQ=255) atatCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagcagc < 1:2649382/150‑1 (MQ=255) atatCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGAGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGagcagc < 1:876541/150‑1 (MQ=255) atCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGt < 2:1811250/150‑1 (MQ=255) atCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGt < 1:4582071/150‑1 (MQ=255) tCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACTCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTg < 1:5088415/150‑1 (MQ=255) tCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTg < 1:3280794/150‑1 (MQ=255) tCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTg > 1:6232723/1‑150 (MQ=255) gTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGAc > 2:5732858/1‑150 (MQ=255) aTGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCa < 2:2231042/150‑1 (MQ=255) aGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCg < 2:4439203/150‑1 (MQ=255) gTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGAcc < 2:1595326/150‑1 (MQ=255) gCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGGGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGt > 2:5435534/1‑150 (MQ=255) cTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGttc > 1:77017/1‑150 (MQ=255) cTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGttc < 2:4940434/150‑1 (MQ=255) tGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGttct > 2:6356611/1‑150 (MQ=255) cTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAc < 2:195923/150‑1 (MQ=255) cTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAc < 2:4041252/150‑1 (MQ=255) cTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAc < 2:77017/150‑1 (MQ=255) tATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAcc < 2:6125969/150‑1 (MQ=255) ggCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTgg < 2:3371228/150‑1 (MQ=255) tCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCa > 2:1799893/1‑150 (MQ=255) ggCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAAt < 2:46072/150‑1 (MQ=255) gCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCa < 2:2083451/150‑1 (MQ=255) cTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAgc > 2:873878/1‑150 (MQ=255) cTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAgc > 2:2130218/1‑150 (MQ=255) tACGCCCAGGACAACCAATGCCTGATCGCCAATGAAGTGCTGAACGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCTTGACAACCTGGCCAGCGACCTGTTCTTCAACTGGCTCAATAGCCCAgcg > 1:2260122/1‑150 (MQ=255) aCGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAgcgg > 2:4267892/1‑150 (MQ=255) aCGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAgcgg < 1:468567/150‑1 (MQ=255) cGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAgcggc < 1:2415725/150‑1 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt > 1:3020464/1‑150 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt > 2:6838504/1‑150 (MQ=255) cAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCCGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTc > 2:3415066/1‑150 (MQ=255) cAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGGTCTTCACCTGGCTCAATAGCCCAGCGGCGGTc > 2:4630223/1‑150 (MQ=255) aCAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATg < 1:521966/150‑1 (MQ=255) aaCCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCACAATAGCCCAGCGGCGGTCGATGcc > 1:4565487/1‑150 (MQ=255) ccTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTCTTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCtt > 2:6181363/1‑150 (MQ=255) cTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACACTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTc > 1:6741584/1‑150 (MQ=255) aTGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCt < 1:4820530/150‑1 (MQ=255) ccTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCa < 1:965516/150‑1 (MQ=255) cTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAg < 2:4510098/150‑1 (MQ=255) cTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAg > 1:6240158/1‑150 (MQ=255) tGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAgg < 1:499743/150‑1 (MQ=255) tGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAgg > 1:1981192/1‑150 (MQ=255) tGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAgg > 1:4058379/1‑150 (MQ=255) tGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAgg > 1:3873162/1‑150 (MQ=255) gCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCaa > 1:3363105/1‑150 (MQ=255) cAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAAcc > 1:3667689/1‑150 (MQ=255) cAATGAAGGGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAAcc > 1:2838266/1‑150 (MQ=255) aaTGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAAccc > 2:5034722/1‑150 (MQ=255) tGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCcgc < 1:1930407/150‑1 (MQ=255) aaGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGt > 1:104526/1‑150 (MQ=255) aGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCGATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTc < 2:2864736/150‑1 (MQ=255) tGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCgg < 1:2225096/150‑1 (MQ=255) aCCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAg < 1:313163/150‑1 (MQ=255) aCCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAg > 1:1339600/1‑150 (MQ=255) aCCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAg < 2:141120/150‑1 (MQ=255) gcGTGAGCGCTCACCGCTCACGGTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAgg > 2:6088581/2‑150 (MQ=255) cGTGAGCGCTCACCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAATCCGCGTCGGTGCAGGc > 1:818806/1‑150 (MQ=255) gtgagcggtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCa < 2:6854302/150‑1 (MQ=255) tgagcggtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAggaag < 2:3018488/150‑4 (MQ=255) agcggtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTg > 1:4121363/1‑150 (MQ=255) gcggtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGc > 2:4119811/1‑150 (MQ=255) | GCCGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGG > NC_002947/3302872‑3303169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |