Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,345,0750CT46.0% 86.6 / 215.1 163intergenic (+67/‑264)ribAB‑II/PP_38143,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (43/44);  new base T (38/36);  total (83/80)
Fisher's exact test for biased strand distribution p-value = 8.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 170 total aligned reads displayed.

GCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGG  >  NC_002947/4344930‑4345224
                                                                                                                                                 |                                                                                                                                                      
gcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTTCCCGCGAATGCGAGGGTGTcacca                                                                                                                                                    >  2:489058/1‑150 (MQ=255)
 cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                                   <  2:7551712/150‑1 (MQ=255)
     aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                               <  1:6471164/150‑1 (MQ=255)
             gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                       <  1:2833623/150‑1 (MQ=25)
             gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                       <  2:2650363/150‑1 (MQ=255)
              ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                      <  2:6401660/150‑1 (MQ=25)
              ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                      <  1:4360259/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCACTTGATTTAGCGGGGCCCTGGAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:4581074/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:2415316/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  1:2629660/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:1334252/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:5813752/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  1:5971138/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:5177744/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:1373262/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  1:3228378/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:7891975/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTCTCACCCTCGCATTCGCg‑g                                                                                                                                    <  1:5398467/150‑1 (MQ=25)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:3064948/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:4706959/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:5016584/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:6202735/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:3114436/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:5290756/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:1079128/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:2522149/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  2:6926708/150‑1 (MQ=255)
               gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:6444771/150‑1 (MQ=25)
                cTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑gg                                                                                                                                   <  1:3249397/150‑1 (MQ=255)
                 tGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGt                                                                                                                                  <  2:2271276/150‑1 (MQ=25)
                 gggCGGGCCACGCGCTGGAGGTGGTGCAGCGCATCCCGCGCGACCCGGGGAGGGATGGCTGAGAACACACAAGCAAGTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAGTCGCG‑GGt                                                                                                                                  <  2:5680268/149‑1 (MQ=38)
                     gggCTATGAGCTGGAGGTGGTGCAGAGCCTCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAAc                                                                                                                              <  1:5049164/150‑1 (MQ=255)
                     gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAAc                                                                                                                              <  1:4135989/150‑1 (MQ=255)
                     gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAAc                                                                                                                              <  1:2213201/150‑1 (MQ=255)
                     gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAAc                                                                                                                              <  1:7468347/150‑1 (MQ=255)
                       gCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                        >  1:3671730/1‑123 (MQ=255)
                       gCTATGAGCTGGAGGTGGTGCAGAGCATCCCGGTCGACCCGGGGATGGATGGCTGAGAACACACAGGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAAccc                                                                                                                            <  2:70324/150‑1 (MQ=21)
                            gAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTTCCCGCGACTTCGAGGGTGACACCACCGACGCCTTCGCG‑GGTGAACCCGCGcc                                                                                                                       >  2:7809730/1‑150 (MQ=255)
                                              agCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  2:3707805/119‑1 (MQ=255)
                                                             ccGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGGTTAACCGCCAAAGCGGGGGTGGCAACACCCACCCACTCGCC‑GGGAAACCCCCACCGACACGGCCCCGGGGGGTTTTTGCACGGCGGAg                                                                                      >  2:1819819/1‑150 (MQ=255)
                                                                   atggatggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                                   >  1:4756731/1‑84 (MQ=255)
                                                                   atggatggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                                   <  2:4756731/84‑1 (MQ=255)
                                                                        tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  2:1852622/93‑1 (MQ=14)
                                                                        tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    >  1:1852622/1‑93 (MQ=14)
                                                                        tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCg‑g                                                                                                                                    <  1:1550277/93‑1 (MQ=14)
                                                                                   acacaAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTTAACGCGAAATAGGGGGTGTCAACAACCCCCCATTACCGCGGAAAAAACAAACC‑AAACGGGCCATGGTTCTTTTTAAAGGGGGGAGTGAAGGCCGGTCGcccccaaac                                                                >  2:188729/1‑145 (MQ=255)
                                                                                       aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    <  1:8132858/78‑1 (MQ=255)
                                                                                       aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCg‑g                                                                                                                                    >  2:8132858/1‑78 (MQ=255)
                                                                                                                     gCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCGTGCCAAAATCTTGGAATACCCTAATATGata                              >  1:6256810/1‑150 (MQ=21)
                                                                                                                         gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                          >  1:265161/1‑150 (MQ=25)
                                                                                                                         gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAg                                                                                                                  <  2:7271067/62‑1 (MQ=255)
                                                                                                                         gTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCg                                                                                         <  1:1874568/87‑1 (MQ=255)
                                                                                                                          tttACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCg                         >  2:3001272/1‑150 (MQ=25)
                                                                                                                            tACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                       >  2:3050068/1‑150 (MQ=25)
                                                                                                                            tACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                       >  1:1698247/1‑150 (MQ=255)
                                                                                                                             aCCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAg                      >  1:1571804/1‑150 (MQ=25)
                                                                                                                              cccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGa                     >  1:2272530/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACCGGGCCCGTGGTGCTTGTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGACTACCATCATATGATCTCCCGTAGAc                    >  2:2536816/1‑150 (MQ=21)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGGGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:5259979/1‑150 (MQ=25)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTg                                                           >  1:1280664/1‑111 (MQ=18)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTg                                                           <  2:1280664/111‑1 (MQ=18)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                                >  2:3380735/1‑122 (MQ=21)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                                <  1:3380735/122‑1 (MQ=21)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:301651/1‑150 (MQ=25)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:505599/1‑150 (MQ=25)
                                                                                                                               ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:8069637/1‑150 (MQ=25)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAgg                                                                                                                 <  2:2704235/57‑1 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAgg                                                                                                                 >  1:2704235/1‑57 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:4619442/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:3823579/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:7046357/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:3421600/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:7046288/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:855931/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:4792242/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  1:663909/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc                    >  2:148508/1‑150 (MQ=255)
                                                                                                                               ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTGTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTGGCCCAAATCTTGGAAGACCATAATCTGATCTCCCGTAGAc                    >  2:2770388/1‑150 (MQ=38)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCTCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  1:6577194/1‑150 (MQ=25)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                                <  1:6786339/121‑1 (MQ=21)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                                >  2:6786339/1‑121 (MQ=21)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  1:2348010/1‑150 (MQ=25)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  2:1654060/1‑150 (MQ=25)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  2:5520458/1‑150 (MQ=25)
                                                                                                                                cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  2:1684977/1‑150 (MQ=25)
                                                                                                                                cgcgAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc                   >  2:2688404/1‑150 (MQ=255)
                                                                                                                                 gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTCCAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAatat                                  >  1:5194694/1‑134 (MQ=25)
                                                                                                                                 gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  2:1320384/1‑150 (MQ=25)
                                                                                                                                 gcgAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACCGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt                  >  1:1118291/1‑150 (MQ=255)
                                                                                                                                   gAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTg                >  1:371642/1‑150 (MQ=255)
                                                                                                                                      tGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATAcc                                         >  2:3833723/1‑122 (MQ=255)
                                                                                                                                      tGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATAcc                                         <  1:3833723/122‑1 (MQ=255)
                                                                                                                                      tGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt             >  1:2946814/1‑150 (MQ=255)
                                                                                                                                      tGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt             >  2:1059924/1‑150 (MQ=255)
                                                                                                                                          aGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGc         <  2:2272530/150‑1 (MQ=255)
                                                                                                                                            ggTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATcc                           <  1:362895/130‑1 (MQ=255)
                                                                                                                                            ggTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATcc                           >  2:362895/1‑130 (MQ=255)
                                                                                                                                             gTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAgg      >  1:6302896/1‑150 (MQ=255)
                                                                                                                                             gTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAgg      >  2:4224585/1‑150 (MQ=255)
                                                                                                                                                 caccacCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCgg  >  2:4351693/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                      
GCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCG‑GGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAGGCCGG  >  NC_002947/4344930‑4345224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑