| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,185,783 | (G)7→8 | intergenic (‑51/‑120) | PP_1033 ← / → cumA | sulfatase domain‑containing protein/multicopper oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,185,776 | 1 | . | G | 96.9% | 1050.4 / 21.8 | 294 | intergenic (‑44/‑127) | PP_1033/cumA | sulfatase domain‑containing protein/multicopper oxidase |
| Reads supporting (aligned to +/- strand): ref base . (4/5); new base G (141/143); total (145/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 312 total aligned reads displayed.
CATGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑G‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAGG > NC_002947/1185628‑1185918 | caTGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGa > 1:7615840/1‑149 (MQ=255) gtCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGTCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑g‑ggg‑gg > 2:6656753/1‑149 (MQ=255) ccTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑g‑ggg‑gg‑ggcgg > 2:4042519/1‑145 (MQ=255) tgcGCATTCACCGAGCCGGCGTCGGGTCGGAAGCGATCGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGAt < 2:7960029/147‑1 (MQ=255) tCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACt < 1:5465019/149‑1 (MQ=255) cacaGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTg < 1:6636524/149‑1 (MQ=255) cacaGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTg > 2:3718555/1‑149 (MQ=255) caGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGc > 2:7901452/1‑149 (MQ=255) agCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGAt > 1:2835305/1‑149 (MQ=255) gCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATCGCCAGTGGCAATc < 1:3441406/149‑1 (MQ=255) gCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGGTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATc > 1:74297/1‑149 (MQ=255) cGGCGTCTTGTCTGAAGCGATAGGCGGGCAATAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGATTTCGGCAAGTCAGCCCCGGGGCGTTGTTTGGGGACCGA‑G‑GGGTGG‑GCGGATTGCCACTGGCGATcgc < 2:6000702/149‑1 (MQ=255) ggCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATcgcg > 1:2414092/1‑149 (MQ=255) gTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGcc > 1:72559/1‑149 (MQ=255) tCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAAc > 2:193365/1‑149 (MQ=255) gAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCgg < 1:1366349/149‑1 (MQ=255) aaGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGc > 1:2241745/1‑149 (MQ=255) aaGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGGTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGc > 1:699773/1‑149 (MQ=255) aaGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGGTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCCCGTCAGCCCCGGGGCGTTGGTAGGGTACCGA‑G‑GGG‑GGCGCGGATTGCCACTGGCGAGCGCGGCCGCGAACCGGc > 2:6105917/1‑149 (MQ=255) aGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTCCCGAGG‑GGG‑GG‑GCGGATTGCCCCTGGCGAGCGCGGCCGCGAACCGGcc > 1:7515333/1‑149 (MQ=255) gCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCg < 2:5780559/149‑1 (MQ=255) gATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTg > 1:132446/1‑149 (MQ=255) aTAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGGTTAGCGGCCgcga < 1:3821329/149‑4 (MQ=255) aTAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGGTTAGCGGCCgcga < 1:3991722/149‑4 (MQ=255) aTAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGGTTAGCGGCCgcga < 2:2334578/149‑4 (MQ=255) aTAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGc < 1:6312870/149‑1 (MQ=255) aGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGa < 2:2028396/149‑1 (MQ=255) ggCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGAc < 2:4138719/149‑1 (MQ=255) gCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTCGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACa < 2:4597656/149‑1 (MQ=255) gCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACa < 1:7906852/149‑1 (MQ=255) gggCAAAAGGCCAGCACCTGCGCACCCCGTTTTTTGACTTAAGCAGCCCACCCTTTATTCGGCAAGTCTGCCCCGGGGCGTTTGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAg < 2:1224452/149‑1 (MQ=255) gggCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAg > 1:1915221/1‑149 (MQ=255) cAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACt > 1:1024580/1‑149 (MQ=255) aaaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACtt > 2:6482361/1‑149 (MQ=255) aaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc > 1:6048141/1‑149 (MQ=255) aaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc > 1:6506545/1‑149 (MQ=255) aaaGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTc > 1:3082316/1‑149 (MQ=255) cAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTaa < 2:7308816/149‑1 (MQ=255) cAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTaa < 2:1684244/149‑1 (MQ=255) gCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAata > 2:3237751/1‑149 (MQ=255) cACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAatat < 2:5030987/149‑1 (MQ=255) aCCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAatagt < 2:2421133/149‑3 (MQ=255) ccTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATAttt < 1:4719189/149‑1 (MQ=255) ccTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATAttt < 2:7173293/149‑1 (MQ=255) ccTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATAttt < 2:636550/149‑1 (MQ=255) tGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCg > 2:2541252/1‑149 (MQ=255) tGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCg > 2:1541941/1‑149 (MQ=255) cgcACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCa > 1:1044487/1‑149 (MQ=255) cgcACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGAATGCCACTGGCGATCTCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCa > 1:1633355/1‑149 (MQ=255) ccGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCa > 1:4523761/1‑149 (MQ=255) gTTTTTAGCCTTAAGCAGCCCACCCTGACGTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg < 2:4948679/149‑1 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg > 2:589623/1‑149 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg < 2:1280495/149‑1 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg > 2:830792/1‑149 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg > 1:4453473/1‑149 (MQ=255) gTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAgg < 1:7646458/149‑1 (MQ=255) tttttAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGgt > 1:1692547/1‑149 (MQ=255) aGACTTAAGCAGCCCACCCTGAAGTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATc > 2:2208879/1‑149 (MQ=255) gACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCg < 2:7362117/149‑1 (MQ=255) tAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCAGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTAtt > 2:4169986/1‑149 (MQ=255) agcagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCg > 2:46175/1‑149 (MQ=255) cagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGcc < 2:1156500/149‑1 (MQ=255) cagcCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGcc < 1:3238386/149‑1 (MQ=255) agcCCACCCTGAATTCGGCATGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGccc < 2:8048383/149‑1 (MQ=255) aCCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCAt < 2:5219006/149‑1 (MQ=255) cTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGc > 1:5650898/1‑149 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGcc > 1:5744617/1‑149 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGcc < 2:3082316/149‑1 (MQ=255) tGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTGGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGcc < 1:1208763/149‑1 (MQ=255) aTTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGc < 2:4470926/149‑1 (MQ=255) ttCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGcc > 2:3902410/1‑149 (MQ=255) ttCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGcc < 1:1428993/149‑1 (MQ=255) ttCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGcc < 1:6807036/149‑1 (MQ=255) tCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGccc > 1:2571019/1‑149 (MQ=255) gCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctg < 2:4380833/149‑1 (MQ=255) gCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctg > 1:7729487/1‑149 (MQ=255) cAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgc > 1:3673548/1‑149 (MQ=255) aGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgctg < 1:5389633/149‑1 (MQ=255) aGTCAGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCctgctg < 1:4580417/149‑1 (MQ=255) aGCCCCGGGGCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAg < 2:7730991/149‑1 (MQ=255) gacccGGGGCGATGCAAGGGTACCCA‑GTGGG‑GG‑GAGGATTTCAAAAGGCGATCGCGGCCGCTAACCGGCTGTGCGACAAGACTTCACAAAATATTTCGCAAATGCAGCTGTATCGTATTCGCCCTTCATCTCCAGCCCCTGAAGGCAGa > 2:158638/3‑149 (MQ=255) gCCCCGGGGAGTTGGTTGGGTACCGA‑GCGGG‑GG‑GCGGATTGCCACTGGCGATCGAGGCCGCTAACCGGCCGTGCGACAAGAATTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGa > 2:4755281/1‑149 (MQ=255) ccccGGGGCGTGGGTTGGGTACCGAGG‑GGG‑GG‑GCGGAGTGCCACGGGCGATCGCGGCCGCTACCCGGCCGTGCGACAAGACTTCACTTAATATGTCGCAACTGCAGGTGTATCGTAGTCGCCCTTCATCGCCAGCCCCTGCTGGCAGAc < 1:5159962/149‑1 (MQ=255) ggggCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGAt < 1:948792/149‑1 (MQ=255) gCGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTgc < 2:2777118/149‑1 (MQ=255) cGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTgcg < 1:6912816/149‑1 (MQ=255) cGTTGGTTGGGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTgcg > 2:4787841/1‑149 (MQ=255) tgggtgggGCACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCa < 1:1131672/147‑1 (MQ=255) gttggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTACCCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaa < 2:5393076/149‑1 (MQ=255) gttggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCCAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCGGGCAGACTGATTGCGCCGac > 1:5103127/1‑148 (MQ=255) gttggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaa > 1:4785172/1‑149 (MQ=255) ttggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGaaa < 1:7331703/149‑1 (MQ=255) tggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAAc > 1:3301485/1‑149 (MQ=255) tggGTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAAc > 1:7799459/1‑149 (MQ=255) gggTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACg < 1:2671601/149‑1 (MQ=255) gggTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACg < 1:4216586/149‑1 (MQ=255) ggTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGa < 1:2035543/149‑1 (MQ=255) gTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAg > 1:2862017/1‑149 (MQ=255) gTACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAg > 1:936878/1‑149 (MQ=255) tACCGAGG‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAgg > 2:2654993/1‑149 (MQ=255) | CATGGTGTCTACCTTCGCATTCACAGAGCCGGCGTCTTGTCTGAAGCGATAGGCGGGCAAAAGGCCAGCACCTGCGCACCCCGTTTTTAGACTTAAGCAGCCCACCCTGAATTCGGCAAGTCAGCCCCGGGGCGTTGGTTGGGTACCGA‑G‑GGG‑GG‑GCGGATTGCCACTGGCGATCGCGGCCGCTAACCGGCCGTGCGACAAGACTTCACTTAATATTTCGCAAATGCAGGTGTATCGTATTCGCCCTTCATCGCCAGCCCCTGCTGGCAGACTGATTGCGCAGAAACGAGG > NC_002947/1185628‑1185918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |