Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 3,311,259 C→G G188R (GGC→CGC)  PP_2907 ← two‑component system response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,311,2590CG100.0% 1184.8 / NA 321G188R (GGC→CGC) PP_2907two‑component system response regulator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (162/159);  total (162/159)

Only 100 of 321 total aligned reads displayed.

GGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTG  >  NC_002947/3311114‑3311404
                                                                                                                                                 |                                                                                                                                                 
ggcggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCgg                                                                                                                                                >  1:7839038/1‑149 (MQ=255)
 gcggcTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGa                                                                                                                                               <  2:1057776/149‑1 (MQ=255)
     cTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGa                                                                                                                                           <  1:4604638/149‑1 (MQ=255)
      tGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGaa                                                                                                                                          <  1:6578536/149‑1 (MQ=255)
       ggTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAg                                                                                                                                         <  1:4734961/149‑1 (MQ=255)
        gTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGt                                                                                                                                        <  1:509563/149‑1 (MQ=255)
         tAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTg                                                                                                                                       >  1:3966183/1‑149 (MQ=255)
            aagaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATa                                                                                                                                    <  1:7314906/149‑1 (MQ=255)
             agaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAg                                                                                                                                   >  2:1239875/1‑149 (MQ=255)
              gaaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGc                                                                                                                                  <  1:2705720/149‑1 (MQ=255)
               aaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGcc                                                                                                                                 <  2:1770358/149‑1 (MQ=255)
               aaCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGcc                                                                                                                                 <  1:2576834/149‑1 (MQ=255)
                aCTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGccc                                                                                                                                <  2:3958780/149‑1 (MQ=255)
                   ccAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAg                                                                                                                             <  2:3828965/149‑1 (MQ=255)
                    cAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGa                                                                                                                            >  2:3634933/1‑149 (MQ=255)
                        cTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTc                                                                                                                        <  1:3018319/149‑1 (MQ=255)
                         tttAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTcc                                                                                                                       <  2:629805/149‑1 (MQ=255)
                              aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaa                                                                                                                  <  2:5292529/149‑1 (MQ=255)
                              aCGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaa                                                                                                                  <  2:7150395/149‑1 (MQ=255)
                               cGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                 >  2:5023827/1‑149 (MQ=255)
                               cGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGaaa                                                                                                                 >  2:1654921/1‑149 (MQ=255)
                                 ggTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAat                                                                                                               <  1:5363906/149‑1 (MQ=255)
                                       gCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcatcat                                                                                                         >  2:6936991/1‑149 (MQ=255)
                                        cAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAatcatcatc                                                                                                        >  1:4823895/1‑149 (MQ=255)
                                          aTGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcg                                                                                                      >  2:4928038/1‑149 (MQ=255)
                                           tGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCcgc                                                                                                     <  2:7069813/149‑1 (MQ=255)
                                             gCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGt                                                                                                   <  1:6688690/149‑1 (MQ=255)
                                              cATCGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGAGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTg                                                                                                  <  2:5908246/149‑1 (MQ=255)
                                                tAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCCTCCGCGTGAt                                                                                                >  2:6100414/1‑149 (MQ=255)
                                                    cGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCTGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAcc                                                                                            <  1:3985186/149‑1 (MQ=255)
                                                    cGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCAcc                                                                                            >  1:1567780/1‑149 (MQ=255)
                                                      gAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTg                                                                                          >  2:3196060/1‑149 (MQ=255)
                                                       aGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTgg                                                                                         <  2:2980242/149‑1 (MQ=255)
                                                         ccccGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGcc                                                                                       >  1:5900578/1‑149 (MQ=255)
                                                           ccgtaccgtaCGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGc                                                                                     <  1:1046395/149‑1 (MQ=255)
                                                              gaccgtacGGATCAGCGGCGCCTGGCCGGGTGAGTCGATCTTCTTGCGCCGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGNTCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCtgt                                                                                  <  2:1146810/148‑1 (MQ=255)
                                                                   tacGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGgcgc                                                                             >  1:3363264/1‑149 (MQ=255)
                                                                    acGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCa                                                                            >  1:3087088/1‑149 (MQ=255)
                                                                       gATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCa                                                                         <  2:428536/149‑1 (MQ=255)
                                                                        aTCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAg                                                                        >  2:222885/1‑149 (MQ=255)
                                                                        aTCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAg                                                                        >  1:3773288/1‑149 (MQ=255)
                                                                            gcggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTAc                                                                    >  1:5448559/1‑149 (MQ=255)
                                                                             cggcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACt                                                                   <  2:4320710/149‑1 (MQ=255)
                                                                               gcgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTcc                                                                 <  2:7315435/149‑1 (MQ=255)
                                                                                cgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCca                                                                >  1:6438428/1‑149 (MQ=255)
                                                                                cgACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCca                                                                <  1:2115580/149‑1 (MQ=255)
                                                                                  aCTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagc                                                              <  2:3247011/149‑1 (MQ=255)
                                                                                   cTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagca                                                             >  1:878650/1‑149 (MQ=255)
                                                                                    tGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGAGGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCcagcag                                                            <  2:4245326/149‑1 (MQ=255)
                                                                                     ggCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCagcagc                                                           <  2:6823222/149‑1 (MQ=255)
                                                                                      gCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCt                                                          <  2:6188413/149‑1 (MQ=255)
                                                                                       ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                         >  2:3555755/1‑149 (MQ=255)
                                                                                       ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                         >  2:1222398/1‑149 (MQ=255)
                                                                                       ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                         >  2:6427058/1‑149 (MQ=255)
                                                                                       ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                         >  2:2444080/1‑149 (MQ=255)
                                                                                       ccGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCtt                                                         >  2:7694746/1‑149 (MQ=255)
                                                                                         gggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGt                                                       <  2:471541/149‑1 (MQ=255)
                                                                                          ggTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTa                                                      >  2:6895141/1‑149 (MQ=255)
                                                                                            tGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACt                                                    >  1:5851888/1‑149 (MQ=255)
                                                                                                tCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGt                                                <  1:6204519/149‑1 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               >  1:3500894/1‑149 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               >  1:365200/1‑149 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               >  1:2243278/1‑149 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               <  1:1963708/149‑1 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               >  1:6960894/1‑149 (MQ=255)
                                                                                                 cGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTg                                               >  1:1308743/1‑149 (MQ=255)
                                                                                                   aTCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTggg                                             >  1:824556/1‑149 (MQ=255)
                                                                                                    tcttctTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGc                                            >  1:7231300/1‑149 (MQ=255)
                                                                                                       tcttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAAc                                         <  1:7717881/149‑1 (MQ=255)
                                                                                                         ttGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAg                                       <  2:4527056/149‑1 (MQ=255)
                                                                                                               aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                 <  2:518602/149‑1 (MQ=255)
                                                                                                               aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                 <  1:6641642/149‑1 (MQ=255)
                                                                                                               aGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAg                                 <  1:6799882/149‑1 (MQ=255)
                                                                                                                  cggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgt                              >  2:7641646/1‑149 (MQ=255)
                                                                                                                  cggcCGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGgt                              >  2:5652272/1‑149 (MQ=255)
                                                                                                                     ccGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgtt                           <  1:6911347/149‑1 (MQ=255)
                                                                                                                      cGATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttg                          >  2:5568337/1‑149 (MQ=255)
                                                                                                                       gATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                         >  2:7621883/1‑149 (MQ=255)
                                                                                                                       gATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                         >  2:276041/1‑149 (MQ=255)
                                                                                                                       gATGTGCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGtgttgt                         >  1:4936739/1‑149 (MQ=255)
                                                                                                                            gCACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcg                    >  2:788947/1‑149 (MQ=255)
                                                                                                                             cACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc                   >  2:3325744/1‑149 (MQ=255)
                                                                                                                             cACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc                   >  2:2178694/1‑149 (MQ=255)
                                                                                                                             cACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc                   <  1:1740095/149‑1 (MQ=255)
                                                                                                                             cACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc                   >  1:2349521/1‑149 (MQ=255)
                                                                                                                             cACGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgc                   >  1:7532666/1‑149 (MQ=255)
                                                                                                                              aCGTCGATCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACcgcg                  >  1:3463659/1‑149 (MQ=255)
                                                                                                                                    aTCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTAATCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGgcgcgc            <  2:3059002/149‑1 (MQ=255)
                                                                                                                                     tCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGcc           >  2:2301050/1‑149 (MQ=255)
                                                                                                                                     tCAGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGcc           <  1:797080/149‑1 (MQ=255)
                                                                                                                                       aGGTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTc         >  2:1919334/1‑149 (MQ=255)
                                                                                                                                        ggTTGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCg        <  2:5625961/149‑1 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      <  1:3956344/149‑1 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      <  2:6761064/149‑1 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      >  2:1350511/1‑149 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      <  2:2076436/149‑1 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      >  1:1519729/1‑149 (MQ=255)
                                                                                                                                          ttGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTg      <  1:1234411/149‑1 (MQ=255)
                                                                                                                                           tGGTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTgg     >  1:4334012/1‑149 (MQ=255)
                                                                                                                                             gTGCGCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCt   >  1:1955441/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GGCGGCTGGTAGAAGAACTCCAGCCTTTAGACGGGTTCAGCAATGGCATAGCCGGAGCCCCGTACCGTACGGATCAGCGGCGACTGGCCGGGTGAGTCGATCTTCTTGCGCAGGCGGCCGATGTGCACGTCGATCAGGTTGGTGCCCGGATCGAAGTGATAGCCCCAGACTTCCTCGAAAATCATCATCCGCGTGATCACCTGGCCGCTGTGGCGCATCAGGTACTCCAGCAGCTTGTACTCGGTGGGCAACAGGTTGAGGGTGTTGTCACCGCGGCGCGCCTCGTGGCTG  >  NC_002947/3311114‑3311404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑