| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,463,895 | Δ1 bp | 8.1% | intergenic (+23/‑39) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,463,895 | 0 | T | . | 8.1% | 942.1 / 75.5 | 285 | intergenic (+23/‑39) | leuS/PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (123/134); new base . (14/9); total (138/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
Only 100 of 290 total aligned reads displayed.
TGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGACGTC > NC_002947/5463746‑5464044 | tGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGAt < 1:7195489/150‑1 (MQ=255) aGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCg < 2:7388951/150‑1 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCgg < 2:4455009/150‑1 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCgg < 2:4865758/150‑1 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCgg < 2:7217767/150‑1 (MQ=255) ccGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCggg > 1:5272342/1‑150 (MQ=255) cgcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGt < 2:6999601/150‑1 (MQ=255) gcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑CAA‑TCGA‑TGCGGGTg < 1:628124/150‑1 (MQ=255) gcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTg > 2:3802040/1‑150 (MQ=255) cgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑CAA‑TCGA‑TGCGGGTgg < 1:4546461/150‑1 (MQ=255) gaagaaGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTggg < 1:905039/150‑1 (MQ=255) aagaagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCAGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGc < 2:5422450/150‑1 (MQ=255) gaagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCgg < 1:3388989/150‑1 (MQ=255) gTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAAc < 1:4880636/150‑1 (MQ=255) tCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAATCGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACa > 2:1558173/1‑150 (MQ=255) gAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAgg > 1:1051808/1‑150 (MQ=255) gCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGccc < 2:501007/150‑1 (MQ=255) gCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACAATCCGCAAGGTCTTCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCACCTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGccc < 2:2694245/150‑1 (MQ=255) tGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAg < 1:1095613/150‑1 (MQ=255) tGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAg < 2:6060069/150‑1 (MQ=255) gCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAgg < 1:6007165/150‑1 (MQ=255) gCCCGAATCAACTAGATTGTCCTGCGCTTCATCGTTGGCCTGACCATCCGAATGGTAATCGTGTTACCGGGCAAGCTGGTCAACATCGTCGCAAACTTATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAgg < 1:6906403/150‑1 (MQ=255) ccccCAGAAACGAGAATGACCTGCGCATAATCTATGGCCAGACCATACGCAACGTCAAAGTGGTACCGGGAAAGCTTGTCAACAACGTATCCAACTGAAGAAAACGACCACCCG‑C‑A‑ACTATAGAGGGTGGGCGGAACAGGCCCAATAgag > 2:7358302/1‑148 (MQ=255) ccGCTGCAACGATATGGTCCTGCGCTTCTTCGATGGCCTGACCTTCCGCATGGTCTTCGTGGTACCGGGCATGCTGGTCAACATCGTCGCCAAGTTATTAAAACGCCCACCGG‑C‑A‑TCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGa < 1:1293416/150‑1 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 2:6299346/150‑1 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 2:3768293/150‑1 (MQ=255) ccGCAGAAACGAGAATGTCCTGCGCTTCATCTATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 1:5086462/150‑1 (MQ=255) cGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAg < 1:3518731/150‑1 (MQ=255) cGCAGCAACGAGAATGTCCCGCGCTTCATCGAGGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCTTTTGCGGGTGGGCGGAACAGGCCCAAAAGGGAg < 1:3826395/150‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGc > 1:3534614/1‑150 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGc < 2:4603312/150‑1 (MQ=255) cagcaACGAGAATGTCCTGCGCTTCATCTATGGCCTGACCTTCCGCATGGTAATCGTTTTACCGGGCAAGCTTGTAAACATCGTCGCAAACTGATTAAAACGCCCACCCG‑C‑A‑TCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGAGca < 1:5797547/150‑1 (MQ=255) gcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGcaac < 2:3545937/150‑1 (MQ=255) aCGATAATGTCCTGCGCTTAATGGTTGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTTATGAAAACGCCCACCCG‑C‑A‑TCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGAGCaacaac < 1:2048549/150‑1 (MQ=255) agaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATg < 2:4571288/150‑1 (MQ=255) gaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGa < 1:5471572/150‑1 (MQ=255) gaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGa < 2:2321096/150‑1 (MQ=255) tCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGACCAGGCCCAAAAGGGAGCAACAACATGATCaaa > 1:3057483/1‑150 (MQ=255) tGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGc > 2:1454585/1‑150 (MQ=255) tCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTg > 2:4073709/1‑150 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt > 2:1911386/1‑150 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 2:6612974/150‑1 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 2:1085788/150‑1 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg > 1:5146988/1‑150 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg < 1:1159818/150‑1 (MQ=255) tGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTaa > 1:3939514/1‑150 (MQ=255) ccTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCg > 1:6376024/1‑150 (MQ=255) cTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCgg > 2:5054860/1‑150 (MQ=255) tGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGc > 2:1805099/1‑150 (MQ=255) aCCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCt < 2:3602342/150‑1 (MQ=255) aCCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCt > 1:3632953/1‑150 (MQ=255) cATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTgg > 2:4309974/1‑150 (MQ=255) cATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTgg > 1:934110/1‑150 (MQ=255) aTCCGCATGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCCCCCG‑C‑A‑GCGATTGCGGGTGGGCGGAACAGGCCCAACAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 1:5925933/150‑1 (MQ=255) tCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCg < 1:2905263/150‑1 (MQ=255) gCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAATGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTc > 2:2476961/1‑150 (MQ=255) cAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCa > 1:3356818/1‑150 (MQ=255) aaGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGAGTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCAt < 2:911536/150‑1 (MQ=255) ggTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 2:3302613/1‑150 (MQ=255) gTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCt > 2:5942677/1‑150 (MQ=255) gTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCt < 1:2217904/150‑1 (MQ=255) gtgccGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATTATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTg < 2:6522677/147‑1 (MQ=255) ccGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGca > 1:1813361/1‑89 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt < 1:2519878/150‑1 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt > 2:2582643/1‑150 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt > 2:6472975/1‑150 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa < 1:6470994/150‑1 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa > 1:1341081/1‑150 (MQ=255) gCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGc > 1:4984238/1‑150 (MQ=255) gCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGc < 1:6199511/150‑1 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa > 2:289481/1‑144 (MQ=255) gTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcg > 1:4129124/1‑150 (MQ=255) aTCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCACCAACATGATCAAACGCACTTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAc > 2:1943443/1‑150 (MQ=255) tcgtcgCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAcc > 1:2834878/1‑150 (MQ=255) cgCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcg > 1:672584/1‑150 (MQ=255) gCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcgc > 1:4792096/1‑150 (MQ=255) ccAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGcc < 2:1151861/150‑1 (MQ=255) cAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCa < 2:158085/150‑1 (MQ=255) tgatgaAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa > 1:5502113/1‑150 (MQ=255) tgatgaAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa < 1:4372954/150‑1 (MQ=255) tgttccGCCCACCCG‑CAA‑TCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTg > 2:3962598/6‑150 (MQ=255) gCCCACCCG‑CAA‑TCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTg > 1:2552292/1‑150 (MQ=255) ccACCCG‑CAA‑TCGA‑TGCGGGTGGGCGTAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa > 2:5171379/1‑150 (MQ=255) ccACCCG‑C‑ACTCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGGGaa > 2:862324/1‑150 (MQ=255) ccACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 2:672584/150‑1 (MQ=255) ccACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa > 1:3137312/1‑150 (MQ=255) ccACCCG‑C‑A‑TCGAGTGCGGGTGGGCGGAACAGGCCCAAACGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 2:5779487/150‑1 (MQ=255) cACCCGCC‑A‑TCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg > 2:3153303/1‑150 (MQ=255) cACCCG‑CAA‑TCGA‑TGCGGGTGGGCGTAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCa < 1:2593698/91‑1 (MQ=38) cACCCG‑CAA‑TCGA‑TGCGGGTGGGCGTAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg > 1:2721031/1‑150 (MQ=255) cACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCCATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg > 2:6127425/1‑150 (MQ=255) cACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg < 1:2316284/150‑1 (MQ=255) g‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAACAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt < 1:5572349/150‑1 (MQ=255) g‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt < 1:1801936/150‑1 (MQ=255) g‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGCGAGCAACAACATGATCAAACGCAATTTGCTGGTAAACGGCCTGGCGGTCATGCTCAGCGCCTGCGCTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt < 2:6640746/150‑1 (MQ=255) c‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGACATg > 2:694029/1‑150 (MQ=255) c‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATg < 1:7180525/150‑1 (MQ=255) cGATTGCGGGTGGGCGGAACGGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAc < 2:5501692/150‑1 (MQ=255) aTTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAc < 2:7165073/148‑1 (MQ=255) aTTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGAc > 1:7165073/1‑148 (MQ=255) | TGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑A‑TCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATGGACGTC > NC_002947/5463746‑5464044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |