| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,463,889:1 | +A | 7.6% | intergenic (+17/‑45) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,463,889 | 1 | . | A | 7.6% | 1149.2 / 88.0 | 277 | intergenic (+17/‑45) | leuS/PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| Reads supporting (aligned to +/- strand): ref base . (122/134); new base A (12/9); total (134/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.74e-01 | |||||||||||
Only 100 of 287 total aligned reads displayed.
TGCCGCTGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATG > NC_002947/5463740‑5464038 | tgccGCTGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑c > 2:3739658/1‑150 (MQ=255) gccGCTGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑a < 1:3232472/150‑1 (MQ=255) gCTGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑aatc < 1:27365/150‑4 (MQ=255) tGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGAt < 1:7195489/150‑1 (MQ=255) tGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGAt > 1:220387/1‑150 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGACAACGCCCACCCG‑C‑ATCGATTGCgg > 2:2786771/1‑150 (MQ=255) gCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCgg < 2:766117/150‑1 (MQ=255) cgcgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGt < 2:1298224/150‑1 (MQ=255) cgAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑CAATCGA‑TGCGGGTgg < 1:5171666/150‑1 (MQ=255) aagaagTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCAGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGc < 2:5422450/150‑1 (MQ=255) agTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑CAATCGA‑TGCGGGTGGGCgttt < 1:5479678/150‑4 (MQ=255) gTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAAc < 1:4880636/150‑1 (MQ=255) gAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAgg > 1:1051808/1‑150 (MQ=255) gAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAgg > 1:4385696/1‑150 (MQ=255) gCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGccc > 2:6367845/1‑150 (MQ=255) cTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCaaaa < 2:1747428/150‑1 (MQ=255) tGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAg < 1:1095613/150‑1 (MQ=255) gCCCGAATCAACTAGATTGTCCTGCGCTTCATCGTTGGCCTGACCATCCGAATGGTAATCGTGTTACCGGGCAAGCTGGTCAACATCGTCGCAAACTTATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAgg < 1:6906403/150‑1 (MQ=255) cccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAggg < 2:6513252/150‑1 (MQ=255) cccGAAGCAACGATAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCTTCGCCAACTGATGAAAACGCCCACCCT‑C‑ATCTATTGCGGGTGGGCGGAACAGGCCCAAAAggg < 2:7050303/150‑1 (MQ=255) ccGCTGCAACGATATGGTCCTGCGCTTCTTCGATGGCCTGACCTTCCGCATGGTCTTCGTGGTACCGGGCATGCTGGTCAACATCGTCGCCAAGTTATTAAAACGCCCACCGG‑C‑ATCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGa < 1:1293416/150‑1 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 1:533054/150‑1 (MQ=255) ccGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa < 2:7346629/150‑1 (MQ=255) cGCAGCAACGATAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCATGGTCATCGTGGTACCGGGCAAGCTGGTCAAAATCGTCGCCAACTGATTAAAACGCCCACCCG‑A‑TTCGATGGCGGGTGGGCGGAACAGGCCCAAAAGGGAg < 1:4019566/150‑1 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGc > 1:3534614/1‑150 (MQ=255) gcagcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGc < 2:4603312/150‑1 (MQ=255) cagcaACGAGAATGTCCTGCGCTTCATCTATGGCCTGACCTTCCGCATGGTAATCGTTTTACCGGGCAAGCTTGTAAACATCGTCGCAAACTGATTAAAACGCCCACCCG‑C‑ATCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGAGca < 1:5797547/150‑1 (MQ=255) gcaACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGcaac < 2:3545937/150‑1 (MQ=255) aaCGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGcaacaa < 2:4412369/150‑1 (MQ=255) aCGATAATGTCCTGCGCTTAATGGTTGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTTATGAAAACGCCCACCCG‑C‑ATCGTTTGGGGGTGGGCGGAACAGGCCCAAAAGGGAGCaacaac < 1:2048549/150‑1 (MQ=255) agagaATGTCATGCGCTTCATCGATGGCCTGAACATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCCACATCTTCGCCAACTGATCAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGTGCGGAACAGGCACAAAAGGGAGCAacaaca > 2:6132178/2‑150 (MQ=255) agaATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATg < 2:4571288/150‑1 (MQ=255) gtttGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGa < 1:3371362/147‑1 (MQ=255) aaTGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGAt < 1:5615342/150‑1 (MQ=255) tGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGTAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGc > 1:6936941/1‑150 (MQ=255) cgcTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCaa < 2:6899413/150‑1 (MQ=255) cTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGa > 2:7185122/1‑126 (MQ=255) cttgcggATGGTCAGGCCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAAttt > 2:1527431/7‑150 (MQ=255) cATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGc < 2:4176793/150‑1 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 2:7385867/150‑1 (MQ=255) aTCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCt < 2:1085788/150‑1 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAATCGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGTAGCAACAACATGATCAAACGCAATTTGCTg < 2:5929714/150‑1 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg < 2:6558850/150‑1 (MQ=255) tCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTg < 1:1159818/150‑1 (MQ=255) gATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGt > 1:6297300/1‑150 (MQ=255) ccTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCg > 2:908643/1‑150 (MQ=255) ccTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCg > 1:383250/1‑150 (MQ=255) cTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCgg > 2:6076782/1‑150 (MQ=255) aCCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCt < 2:3602342/150‑1 (MQ=255) aCCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCt > 1:3632953/1‑150 (MQ=255) ccATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTg < 1:2554359/150‑1 (MQ=255) aTCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 2:5005337/150‑1 (MQ=255) aTCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc < 1:6109854/150‑1 (MQ=255) aTCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGc > 1:5928721/1‑150 (MQ=255) tCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCg < 1:2905263/150‑1 (MQ=255) gCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAATGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTc > 2:2476961/1‑150 (MQ=255) gCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTc > 2:3864774/1‑150 (MQ=255) ggTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGc > 2:3302613/1‑150 (MQ=255) tACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc < 1:2302338/150‑1 (MQ=255) tACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGc > 1:3697866/1‑150 (MQ=255) aCCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCg < 2:6667957/150‑1 (MQ=255) ccGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGca > 1:1813361/1‑89 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt < 1:2519878/150‑1 (MQ=255) gggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGtt > 2:2582643/1‑150 (MQ=255) ggCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGttt > 2:1570094/1‑150 (MQ=255) gCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTc > 1:907297/1‑150 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa > 1:4284582/1‑150 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa > 1:1341081/1‑150 (MQ=255) aaGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCa < 1:6470994/150‑1 (MQ=255) gCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGc > 1:4984238/1‑150 (MQ=255) tCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcgc > 2:3797398/1‑150 (MQ=255) tCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTgcgc < 1:6248649/150‑1 (MQ=255) cAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGcgcg > 2:6040863/1‑150 (MQ=255) aCATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGc > 2:6631035/1‑150 (MQ=255) aCATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGc > 1:2693026/1‑150 (MQ=255) tcgtcgCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAcc > 1:2834923/1‑150 (MQ=255) tcgtcgCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCAcc > 1:3002252/1‑150 (MQ=255) cgCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGgcg > 1:672584/1‑150 (MQ=255) ccAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGcc < 2:1151861/150‑1 (MQ=255) aaCTGATGAAACCGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCAc > 1:552622/1‑150 (MQ=255) tgatgaAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGcgcg > 1:3512859/1‑134 (MQ=255) tgatgaAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa > 1:5094971/1‑150 (MQ=255) ggatgaAACCGCCCACCCG‑C‑ACCGAGCGCGGGTGGGCGGAACAGGCCCAACAGGGAGCAACAACATGATCAACCGCAAGGTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGa < 2:19410/149‑1 (MQ=255) atgaAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGc > 2:4057844/1‑150 (MQ=255) gaAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTg > 2:5024879/1‑150 (MQ=255) aaaaCGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGa > 2:5696372/1‑150 (MQ=255) gCCCACCCG‑CAATCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTCATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTg > 1:798922/1‑150 (MQ=255) cccACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGa < 2:4749372/150‑1 (MQ=255) ccACCCG‑CAATCGA‑TGCGGGTGGGCGTAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa > 2:5171379/1‑150 (MQ=255) ccACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAACGGGAGCAACAACATGATCAACCGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 1:4836232/150‑1 (MQ=255) ccACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa < 2:2905421/150‑1 (MQ=255) ccACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGaa > 2:2188703/1‑150 (MQ=255) cACCCGCC‑ATCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg > 2:3153303/1‑150 (MQ=255) cACCCG‑CAATCGA‑TGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg > 2:1880057/1‑150 (MQ=255) cACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAg < 1:310852/150‑1 (MQ=255) aCCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGACACCGGCGCCACCGAGCTGAGCGTGAAgg < 2:6954232/150‑1 (MQ=255) cG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGaaa > 1:2381270/1‑150 (MQ=255) g‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt < 1:1801936/150‑1 (MQ=255) g‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAAt > 1:4598571/1‑150 (MQ=255) c‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATg < 1:7180525/150‑1 (MQ=255) | TGCCGCTGCCAGCCGCGAAGAAGTCGAAGCCGCTGCCCGCAGCAACGAGAATGTCCTGCGCTTCATCGATGGCCTGACCATCCGCAAGGTCATCGTGGTACCGGGCAAGCTGGTCAACATCGTCGCCAACTGATGAAAACGCCCACCCG‑C‑ATCGATTGCGGGTGGGCGGAACAGGCCCAAAAGGGAGCAACAACATGATCAAACGCAATTTGCTGGTAATCGGCCTGGCGGTCATGCTCAGCGCCTGCGGTTTCCAGCTGCGCGGCACCGGCGCCACCGAGCTGAGCGTGAAGGAAATG > NC_002947/5463740‑5464038 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |