| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,246,917:1 | +T | 8.3% | intergenic (+27/+31) | grxD → / ← bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,246,917 | 1 | . | T | 8.3% | 1081.4 / 93.2 | 264 | intergenic (+27/+31) | grxD/bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base . (113/129); new base T (8/14); total (121/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
CAACTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGC > NC_002947/1246768‑1247065 | gtgGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCa < 2:5425498/150‑1 (MQ=255) gggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 1:405375/150‑1 (MQ=255) gggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 1:4828525/150‑1 (MQ=255) gggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 2:2738533/150‑1 (MQ=255) ggTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCg < 2:6603821/150‑1 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAATAAACCCGC‑GATCAGCgg > 1:1007173/1‑150 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GGTCAGccg > 2:2146058/1‑148 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg < 1:5576144/150‑1 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg < 1:4802668/150‑1 (MQ=255) gTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg < 2:385907/150‑1 (MQ=255) tAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCggg > 1:307803/1‑150 (MQ=255) gCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtt < 2:788758/150‑1 (MQ=255) ccGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttt < 2:5760222/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttt < 1:2680762/150‑1 (MQ=255) ggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCGGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATACAAAAACCCGC‑GATCAGCGGGttttt < 1:6962315/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGTAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 2:1706441/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtttttt < 2:3172628/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 1:7035586/150‑1 (MQ=255) gTGAGCTGGTGGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 2:4649748/150‑1 (MQ=255) tgCTGGTTGGCGGCAGCGACATCATGCTGGAATTGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTAt < 1:1512004/149‑1 (MQ=255) gCTGGTTGGCGGCAGCGACCTCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATg < 2:2273239/150‑1 (MQ=255) ggcggcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGaa < 2:4459318/150‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGt < 1:2803482/150‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGt < 2:4937430/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTa < 2:5969559/150‑1 (MQ=255) aGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAAGAGtaa < 1:4229934/150‑3 (MQ=255) atcatGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTc > 1:3018234/1‑150 (MQ=255) tGCTGGAAGTGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGccc > 2:1269996/1‑150 (MQ=255) tGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGccc > 1:2130453/1‑150 (MQ=255) gCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCa > 2:5690907/1‑150 (MQ=255) gCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCa > 1:4136130/1‑150 (MQ=255) ggAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCt > 1:5460715/1‑150 (MQ=255) aTGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGa < 2:3667856/150‑1 (MQ=255) ttCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTATTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTg < 1:1391884/150‑1 (MQ=255) agaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAgg > 1:1909642/1‑150 (MQ=255) agaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GAGCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAgg > 2:4753419/1‑150 (MQ=255) gaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGt < 1:1663923/150‑1 (MQ=255) aaGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTa < 1:6367673/150‑1 (MQ=255) aGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAg < 1:7102154/150‑1 (MQ=255) aGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAg < 1:223815/150‑1 (MQ=255) gAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTtctc < 1:925381/150‑1 (MQ=255) aGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCgg > 1:2340278/1‑92 (MQ=255) gCTGCAAACCCTGATCAAGGACGCGGCGGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGa < 1:2211952/150‑1 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGGCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa > 2:2592765/1‑150 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa > 2:627364/1‑150 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa > 1:24147/1‑150 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa > 2:3499391/1‑150 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc < 1:675000/150‑1 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt > 1:4578471/1‑89 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCt > 1:3323219/1‑150 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCt > 1:3552628/1‑150 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCa < 2:235195/127‑1 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTg < 2:646240/150‑1 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTg > 2:4330620/1‑150 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTg > 2:7031932/1‑150 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTGCGCCCATCTGCGACTGCAGGTCGTTCTCGTTACCGATCtgg > 1:6811882/1‑148 (MQ=255) gATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGt < 2:5919088/150‑1 (MQ=255) aTCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc < 2:7428540/150‑1 (MQ=255) aTCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc < 1:5690907/150‑1 (MQ=255) aTCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTc < 1:4912697/150‑1 (MQ=255) tCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGa > 1:5220933/1‑136 (MQ=255) tCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCGTGTCg > 2:278169/1‑150 (MQ=255) cAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGa < 2:5063943/150‑1 (MQ=255) cAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGa > 1:851305/1‑150 (MQ=255) aaGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATc > 2:5561602/1‑70 (MQ=255) aGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATc < 2:7282086/150‑1 (MQ=255) gcgGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGAt > 1:4489816/1‑144 (MQ=255) ggCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCa > 2:4024914/1‑150 (MQ=255) gCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtttt > 1:6046558/1‑71 (MQ=37) gCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGtttt < 2:6046558/71‑1 (MQ=37) cTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGt > 1:7367594/1‑150 (MQ=255) ccaaggccaaggCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCGTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg > 1:3659466/1‑150 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg < 1:1103128/148‑1 (MQ=255) aggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagc > 2:1964607/1‑150 (MQ=255) aggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTAGGGTTTccagc > 2:4206586/1‑150 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca < 1:5365079/150‑1 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGt > 1:1721376/1‑150 (MQ=255) cTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCg > 1:6380620/1‑150 (MQ=255) gCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAtgtg < 1:2954222/150‑1 (MQ=255) ccTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGc < 1:2419433/150‑1 (MQ=255) tGATCTTCCGGCAACCAAAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctc < 1:3956352/150‑1 (MQ=255) tGATCATCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctc > 2:4969662/1‑150 (MQ=255) ttCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCt > 1:3770924/1‑150 (MQ=255) cAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACt > 1:128123/1‑150 (MQ=255) aaGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGTTCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc < 2:5221791/150‑1 (MQ=255) aGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCg < 1:3225631/150‑1 (MQ=255) gCATAAAAAAACCCGC‑GATCTGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGa < 2:6776278/150‑1 (MQ=255) gCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGa > 2:1481396/1‑150 (MQ=255) cATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg > 2:2081624/1‑150 (MQ=255) cATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg < 2:1763979/150‑1 (MQ=255) aTAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGACTAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGACGATGTGCTCTTCCTCGGACTCGAgg > 2:1096214/1‑150 (MQ=255) tAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGa > 1:2501386/1‑150 (MQ=255) aaaaCCCGCTGATC‑GCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATc > 1:235909/1‑150 (MQ=255) aaaCCCGCTGATC‑GCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCt > 2:1298104/1‑150 (MQ=255) aCCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTc < 1:5258701/150‑1 (MQ=255) cccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCg > 2:7352659/1‑150 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa < 1:3499391/150‑1 (MQ=255) cgc‑gATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAg > 2:160782/1‑150 (MQ=255) gc‑gATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGc > 1:1952712/1‑150 (MQ=255) gc‑gATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGc > 2:7230983/1‑150 (MQ=255) | CAACTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATGGGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGC > NC_002947/1246768‑1247065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |