New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1088096 | 315 (0.990) | 19 (0.060) | 11/256 | NT | 6.0% | coding (2797/3822 nt) | PP_0938 | hypothetical protein |
? | NC_002947 | = 1088120 | 301 (1.010) | coding (2821/3822 nt) | PP_0938 | hypothetical protein |
GCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1087941‑1088096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcc‑‑gGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA < NC_002947/1088120‑1087972 GCGGGCGCCTGGAGACCCTGGACCTGTCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGAACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACC < 2:5802017/150‑1 GCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACC > 2:2427979/1‑150 CGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCA < 1:2636045/150‑1 CGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCA > 2:456585/1‑150 tCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGC > 2:3532940/2‑150 CGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC < 1:632130/150‑1 GCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑G > 2:615769/1‑150 GGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGACCCAGGCCGTGGGCCGCCCCGGGCCAGG < 1:507347/150‑1 CCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGAC < 2:1367905/150‑1 TGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACG < 1:6153291/150‑1 TGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACG < 1:6153286/150‑1 TGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACG < 1:7023331/150‑1 GCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGC < 1:4928695/150‑1 GCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGC < 1:4928687/150‑1 GCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGC < 2:3694678/150‑1 GCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGC < 1:1482334/150‑1 CAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGTGGGCCGCCCCGGGCCAGGCGGACCACGG < 1:1697096/150‑1 CAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCC < 2:2905586/150‑1 CAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCC < 2:4191278/150‑1 AGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGT < 2:3447842/150‑1 AGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCA < 1:3975615/150‑1 CGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGT < 1:6099604/150‑1 CGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGT < 1:6353192/150‑1 CTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGG > 1:5361554/1‑81 CTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑GGGCCGCCCCGGGCCAGG < 2:5361554/81‑1 CCTTCGGCATGGACCTGAACCAGGCC‑‑GTGGTCCGCCTGGCCCGGGGCGGCCCGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCCGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCCCCGGGGTCGTCCCCAG > 2:5391960/1‑150 cgcctGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGC > 1:1060278/6‑150 CCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC < 2:2745329/150‑1 CCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC > 1:3813024/1‑150 CCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC < 2:705158/150‑1 CCAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC < 2:2767172/150‑1 CAGGCG‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 2:6883531/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 2:2852141/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:6509772/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:6509674/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:512527/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 2:4962016/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:4328454/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACCGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 2:2714599/1‑150 CAGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACCGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 2:2714624/1‑150 tGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTT < 2:1060278/149‑1 AGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCATCCGGCCCGCCTGCTCTT < 1:4259526/150‑1 AGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTT < 2:6934208/150‑1 AGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTT < 2:4886105/150‑1 AGGCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTACAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTT < 2:876390/150‑1 GCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGC > 2:6029310/1‑150 GCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGC < 1:1011652/150‑1 GCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGC < 1:570872/150‑1 GCC‑‑GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGC < 2:2800348/150‑1 GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA > 2:5063970/1‑150 GCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1087941‑1088096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcc‑‑gGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA < NC_002947/1088120‑1087972 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |