| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1825976 | 0 (0.000) | 16 (0.050) | 10/262 | NT | 100% | coding (748/1422 nt) | PP_1624 | group II intron‑encoding maturase |
| ? | NC_002947 | = 2075325 | NA (NA) | coding (707/1422 nt) | PP_1846 | group II intron‑encoding maturase | |||||
CGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1825937‑1825976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < NC_002947/2075325‑2075177 CGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTATCTTTGACCCGGCGCTCGATACAGGCCATCAGGATGTCGTG < 1:2907920/150‑1 GAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGA > 2:2770602/1‑109 GAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGA < 1:2770602/109‑1 AGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCC > 1:3593499/1‑150 AGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCC > 1:3762770/1‑150 AGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCC > 1:3762943/1‑150 GGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCG > 1:2821545/1‑150 GGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCG > 2:5045986/1‑150 GGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGA > 2:3880570/1‑150 GGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGA < 1:5045986/150‑1 GGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGAT < 1:5243764/107‑1 GGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGAT > 2:5243764/1‑107 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATT < 2:6157699/141‑1 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATT > 1:6157699/1‑141 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGA < 1:5075429/116‑1 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGA > 2:5075429/1‑116 CCGTGGGCTGACGACCCCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:6023603/150‑1 CCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC > 2:3075052/1‑150 CCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:1425210/150‑1 CCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:289981/150‑1 CCGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC > 1:1106047/1‑150 CGTGGGCTGACGACACCGCCCGACTTGATCCCGGCTTCAAGGTAGGGGCGAATAAGCCTGTGTACTCAATTGTCTTTTATCCGACGTTCGATGCAGGCCTTGAGGATGTCGTGATTTACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:1837416/150‑1 CGTGGGCTGACGACACCGCCCGACTTGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:6672138/150‑1 CGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:7049863/150‑1 CGTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:6672102/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCCTGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA > 2:5775172/1‑150 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAATCTTCTCCAGATCGAGTTCCA > 2:7391921/1‑150 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:4868295/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:3458847/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA > 2:5066770/1‑150 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:5119503/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:5599672/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:3255872/150‑1 GTGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:2270283/150‑1 TGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:6430444/150‑1 TGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:5992671/150‑1 TGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:5915503/150‑1 TGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC > 1:4701763/1‑150 TGGGCTGACGACACCGCCCGACATGATCCCGGATTCTAGGTAGCGGCGAATAATCATGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCTGGCCATGTGGATGTGGTGATTGACCCGTTCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:4796964/150‑1 CGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1825937‑1825976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACGACACCGCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < NC_002947/2075325‑2075177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |