| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4538561 = | 209 (0.660) | 12 (0.040) | 9/248 | NT | 6.7% | intergenic (+10/‑164) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| ? | NC_002947 | 4538650 = | 144 (0.500) | intergenic (+99/‑75) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase | |||||
GTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4538718‑4538561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGAT > NC_002947/4538650‑4538798 GTCTCGTGGGTGCTGGAAGCGACGGGAGCTATTGTGAATAGGAGGGATTTTGGCGGGTATCAGGATGTTGTGTTGCCTGTGTGGGCCTCTTCGCTGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACA < 2:6771642/150‑1GTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACA < 2:4893789/150‑1 TCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAG < 1:954188/150‑1 CTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGG < 2:3526641/150‑1 CTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGG < 1:3523384/150‑1 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACAGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 2:1358219/1‑150 CTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAA > 2:1044795/1‑150 CTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAA < 1:5659291/150‑1 CTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCGCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAA < 2:4250349/150‑1 TGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAAC > 2:479068/1‑150 TGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCATTCACCCGCGAAGAGGCCCGCACAGGCAAC > 2:3529612/1‑150 GGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCCCGAAGAGGCCCGCACAGGCAACAC > 2:4624795/1‑150 GGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTAGCAGGTGAACCCCCTCCTACACAGTGAGGTCCCTTTAACCCCCGAACAGGCCCGCACACGCAACACAgaagc > 2:6223427/1‑145 AGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCAACACAGTGAGGTCCCTTTCACCCCCGAAGAGGCCCGCACAGGCAACGCAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCATCGCTTCCTG > 2:2557216/1‑150 GCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCA > 2:310795/1‑150 GCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCA > 1:6204520/1‑150 GCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCA > 1:6677540/1‑150 CTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATG > 2:2393680/1‑150 CTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCGTCGCTTCCTGCCCCCAGGAGACACGACCcggag > 2:7204409/1‑145 TTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCT < 2:2414805/125‑1 TTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCT > 1:2414805/1‑125 GCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAT > 2:5532991/1‑150 GCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAT > 1:6603338/1‑150 CGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAA < 1:310795/150‑1 TCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAA < 2:6603338/150‑1 CCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAAC < 2:5111408/104‑1 CCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAAC > 1:5111408/1‑104 CACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGAT < 2:299745/150‑1 CACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGAT < 2:299802/150‑1 ACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATG < 1:3773927/150‑1 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 1:6612072/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 2:6687851/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 2:5425659/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 2:463350/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 1:3423393/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 1:982858/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCA > 2:1397239/1‑150 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGC > 1:2081076/1‑111 AGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGC < 2:2081076/111‑1 GGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCGCCCAGGAGACCCGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCAC > 2:3857109/1‑150 GGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCGCCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCAC > 2:3857110/1‑150 GGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCAC < 1:5532991/150‑1 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACC > 2:2277989/1‑150 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACC < 2:60925/150‑1 CAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCG < 1:3962263/150‑1 AACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGG < 2:3822025/150‑1 ACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGT < 2:4378835/150‑1 CACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTG > 1:1993142/1‑150 CACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTG < 1:1225986/150‑1 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA > 1:5328680/1‑150 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCATCGAGATGCACCGGTGA > 1:3005923/1‑150 CAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGAT > 2:6241758/1‑150 GTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4538718‑4538561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGAT > NC_002947/4538650‑4538798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |