| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5243650 = | 207 (0.650) | 17 (0.060) | 15/254 | NT | 7.2% | coding (165/204 nt) | PP_5701 | hypothetical protein |
| ? | NC_002947 | 5243733 = | 247 (0.830) | intergenic (+44/‑237) | PP_5701/PP_4616 | hypothetical protein/hypothetical protein | |||||
CACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5243807‑5243650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAATT > NC_002947/5243733‑5243881 CACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGGGGGAGCGGGCGAG > 2:2814723/1‑150 ACAGGCTTGCCCGCGACTGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTCCTGTGGTGACCGCTGTGGGAGCGGGCGAGC > 2:6409276/1‑150 ACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCTCAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGC > 2:7426596/1‑150 ACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGC < 2:3696363/150‑1 ACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGC < 1:4153266/150‑1 ACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGC > 2:621458/1‑150 ACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCAGGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGC < 2:3727441/150‑1 CAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCC < 2:4200764/150‑1 cgggTTGCCCGCGATGGGGGTGGGGGCGGCGAGGGGGCTTGGCCGGGTATATTTGTCGGCAGGTCCGGCCGTTGCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCC < 1:1833785/146‑1 cGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCC < 2:1310980/149‑1 AGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCC > 1:5694363/1‑150 AGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCC < 1:4260548/150‑1 GCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGC < 2:5068853/150‑1 GCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGC > 2:3191449/1‑150 GCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGC > 1:2147394/1‑150 TTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCCCCCCCGCGCCCACAGGTCCTGTGCACGGCGTGACTACAGTGGTGACCGCGGGGGGAGCGGGCGAGCCCGCGc > 1:5726335/1‑149 TTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGA > 2:2175279/1‑150 AGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCCCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCC > 1:1305295/1‑150 CCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATT > 1:3473295/1‑150 CCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATT > 1:3473282/1‑150 GCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGT > 1:4421903/1‑150 ACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTGCCGACAAATAT‑CCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCC > 2:4750002/1‑150 CCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGT < 1:493673/111‑1 CCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGT > 2:493673/1‑111 CGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCCCTTCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACA > 1:3338747/1‑150 CGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACA > 1:5120010/1‑150 TCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACT > 2:7438838/1‑150 CCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTGCCG < 1:1669960/80‑1 CCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTGCCG > 2:1669960/1‑80 CACAGGTACTGTGCAAGTCTTGAGTACTGTGGTGACCGCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTT > 2:4186839/1‑150 ACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCCCTTCCGGCAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTT > 1:79711/1‑150 GGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTC > 2:2498555/1‑150 GCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGC < 2:4421903/150‑1 GGGCGAGCCCGCGAAGAGGCCGGCCCTTCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGT < 2:3338747/150‑1 GAGCCCGCGAAGAGGCCGGCCCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCA < 2:1305295/150‑1 gGCCCGCGCAAGGGCCGGACCGGCCGACAAAGATCCCCGGCCAGGCACCGTCGCAGCCGCCACCCCCTTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCAC < 1:5175811/149‑1 CCCCCGAAAGGGCCGGACCTTCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGC < 2:608407/150‑1 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCT > 2:1522156/1‑150 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCT > 1:6693611/1‑150 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCT > 1:3844828/1‑150 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCG < 2:4407673/136‑1 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCG > 1:4407673/1‑136 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGC < 1:113199/120‑1 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGC < 1:113037/120‑1 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGC > 2:113199/1‑120 CCGCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGC > 2:113037/1‑120 GCGACAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCAGTCGCGGGCACGCCTGTGCCTACAACTGTTGCGGGCACATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTAC > 2:6641635/1‑150 GCGAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTAC > 1:3588493/1‑150 GAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTTGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAA > 1:7317556/1‑150 GAAAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAA < 1:670411/150‑1 AAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAATT > 2:1740491/1‑150 AAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAATT > 2:1705516/1‑150 CACAGGCTTGCCCGCGAATGGGGTGGCGGCTGCGACGGTGCATGGCCGGGGATATTTGTCGGCAGGTCCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAAGTCTTGACTACTGTGGTGACCGCTGTGGGAGCGGGCGAGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5243807‑5243650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgcgaaAGGGCCGGACCTGCCGACAAATATCCCCGGCCATGCACCGTCGCAGCCGCCACCCCATTCGCGGGCAAGCCTGTGCCTACAACTGTTTCGGGCAAATGGTTCCTGGCAAAGGCGCTCCCGCAGCGCTCGGTCTGTGCCACGCTACAATT > NC_002947/5243733‑5243881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |