New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5875266 =115 (0.360)15 (0.060) 12/214 NT 16.0% intergenic (+22/+112) PP_5144/ptsP hypothetical protein/phosphoenolpyruvate‑dependent regulator
?NC_002947 5875359 = 67 (0.270)intergenic (+115/+19) PP_5144/ptsP hypothetical protein/phosphoenolpyruvate‑dependent regulator

Only 100 of 307 total aligned reads displayed.

CCAGCCAGAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCC  >  NC_002947/5875117‑5875412
                                                                                                                                                     |                                                                                                                                                   
ccagccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGG                                                                                                                                                     >  2:1879402‑M1/1‑150 (MQ=255)
ccagccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGG                                                                                                                                                     >  1:1561861‑M1/1‑150 (MQ=255)
  agccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGC                                                                                                                                                   <  2:5770775‑M1/150‑1 (MQ=255)
  agccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGC                                                                                                                                                   >  2:1376200‑M1/1‑150 (MQ=255)
  agccagAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGC                                                                                                                                                   >  1:2154354‑M1/1‑150 (MQ=255)
      agAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCT                                                                                                                                               >  1:7342542‑M1/1‑150 (MQ=255)
        aactgctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcgactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTc                                                                                                                                             >  2:3952506‑M1/142‑150 (MQ=255)
         actgctggccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTcg                                                                                                                                            <  2:6822571‑M1/10‑1 (MQ=255)
            aCGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGG                                                                                                                                         <  2:7026804‑M1/150‑1 (MQ=255)
            aCGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGG                                                                                                                                         <  1:4305221‑M1/150‑1 (MQ=255)
            aCGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGG                                                                                                                                         <  2:379701‑M1/150‑1 (MQ=255)
               ggACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTG                                                                                                                                      >  2:5695056‑M1/1‑150 (MQ=255)
                 ccgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaacccggtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGaa                                                                                                                                    >  2:6955389‑M1/133‑150 (MQ=255)
                  cgaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAAc                                                                                                                                   >  2:3720215‑M1/132‑150 (MQ=255)
                  cgaggccttgagccacgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGggtgtac                                                                                                                                   <  1:524632‑M1/19‑4 (MQ=255)
                  cccGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAC                                                                                                                                   <  1:5619788‑M1/150‑1 (MQ=255)
                   gaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAAcc                                                                                                                                  >  1:6776355‑M1/131‑150 (MQ=255)
                   gaggccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAAcc                                                                                                                                  >  1:3580193‑M1/131‑150 (MQ=255)
                      gccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGc                                                                                                                               >  1:7021998‑M1/128‑150 (MQ=255)
                       ccttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCt                                                                                                                              >  2:4939201‑M1/127‑150 (MQ=255)
                        ctcgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTc                                                                                                                             >  2:2670035‑M1/126‑150 (MQ=255)
                        cGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTC                                                                                                                             <  1:4370929‑M1/150‑1 (MQ=255)
                         ttgagccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTcc                                                                                                                            >  2:3971209‑M1/125‑150 (MQ=255)
                           gCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTA                                                                                                                          <  2:6016357‑M1/150‑1 (MQ=255)
                            agccatgacaacccgcaggttatccacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTAc                                                                                                                         >  2:1035974‑M1/122‑150 (MQ=255)
                             acaGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACa                                                                                                                        <  1:1020214/150‑1 (MQ=255)
                                  gCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGc                                                                                                                   <  1:1146584/150‑1 (MQ=255)
                                  gCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGc                                                                                                                   <  1:930088/150‑1 (MQ=255)
                                    tGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTA                                                                                                                          <  2:4493801‑M1/141‑1 (MQ=255)
                                      aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg                                                                                                               <  2:2719668/150‑1 (MQ=255)
                                      aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg                                                                                                               <  1:4117152/150‑1 (MQ=255)
                                      aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg                                                                                                               <  2:5425294/150‑1 (MQ=255)
                                       ttGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGATTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTggg                                                                                                              <  2:113467/150‑1 (MQ=255)
                                        tgtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGt                                                                                                             <  1:3129172/150‑1 (MQ=255)
                                        tgtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGt                                                                                                             <  1:1723459/150‑1 (MQ=255)
                                        tgtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGt                                                                                                             <  1:292116/150‑1 (MQ=255)
                                          tgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGT                                                                                                                                       >  2:4317444‑M1/1‑122 (MQ=255)
                                             atgatCAGGGGCAAAGGCGGCTGGTTGAGCGGAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAAc                                                                                                        <  1:5745452/150‑1 (MQ=255)
                                              tgatCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAAcc                                                                                                       <  2:2346096/150‑1 (MQ=255)
                                                 tCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGACCAACCCCa                                                                                                    >  2:2367920/1‑150 (MQ=255)
                                                 tCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGG                                                                                                                                                     >  2:1590120‑M1/1‑101 (MQ=255)
                                                   aGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  2:4097531/150‑1 (MQ=255)
                                                   aGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  1:6128168/150‑1 (MQ=255)
                                                   aGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  1:5893974/150‑1 (MQ=255)
                                                   aGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  2:7258952/150‑1 (MQ=255)
                                                   aGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCGTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  1:2924746/150‑1 (MQ=255)
                                                    cacagctcgctgcaactggccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccgg                                                                                                                                                    >  1:6680918‑M1/98‑99 (MQ=255)
                                                      ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  2:3900108/147‑1 (MQ=255)
                                                      ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgt                                                                                              <  2:1097457/150‑1 (MQ=255)
                                                      ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgt                                                                                              >  2:524632/1‑150 (MQ=255)
                                                      ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgt                                                                                              <  2:1683184/150‑1 (MQ=255)
                                                      ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgt                                                                                              <  1:4581675/150‑1 (MQ=255)
                                                       gCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtg                                                                                             >  2:7090296/1‑150 (MQ=255)
                                                        cAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtgt                                                                                            <  1:2375943/150‑1 (MQ=255)
                                                        cAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtgt                                                                                            <  1:3993568/150‑1 (MQ=255)
                                                        cAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtgt                                                                                            <  1:3323010/150‑1 (MQ=255)
                                                               ggcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCGACAAAGGCCAGGGTCCCAACCCC‑GATGGGTGTACggg                                                                                     >  2:5591673/1‑148 (MQ=38)
                                                                gcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTTTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttg                                                                                     >  2:824056‑M1/1‑114 (MQ=255)
                                                                  tGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgta                                                                                  >  1:7140174‑M2/1‑147 (MQ=255)
                                                                   ggTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtag                                                                                  <  1:2348530‑M1/150‑40 (MQ=255)
                                                                   ggTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtag                                                                                 >  1:6297386‑M2/1‑146 (MQ=255)
                                                                     ttGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCt                                                                                                                 <  2:5742757/117‑1 (MQ=255)
                                                                       gAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagc                                                                             >  2:7447576‑M2/1‑142 (MQ=255)
                                                                       gAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagc                                                                             >  1:2046462‑M2/1‑142 (MQ=255)
                                                                       gAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCAACAACGGCCTGGGTCCAACCCCA‑CATGTGTGTACGTGgtaggagc                                                                             <  2:6342874‑M2/150‑9 (MQ=255)
                                                                       ccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGc                                                                             >  1:3254198‑M1/79‑150 (MQ=255)
                                                                         gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTTTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgg                                                                            <  1:824056‑M1/150‑46 (MQ=255)
                                                                         gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgg                                                                            <  1:1376200‑M1/150‑46 (MQ=255)
                                                                         gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgg                                                                           >  1:3855400‑M2/1‑140 (MQ=255)
                                                                         gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCGCCGACAACGGCCGGGGTCCAACCCCC‑CATGTGTGTACGGGgtaggagcgg                                                                           <  2:2106234‑M2/150‑11 (MQ=255)
                                                                         gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGGTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgg                                                                           >  2:534302‑M2/1‑140 (MQ=255)
                                                                         ctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgttgtctgttcgGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg                                                                           >  1:5879418‑M1/77‑150 (MQ=255)
                                                                          cgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcggg                                                                          >  1:4248934‑M2/1‑139 (MQ=255)
                                                                          cgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcggg                                                                          >  1:2688717‑M2/1‑139 (MQ=255)
                                                                            cAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCACCTACAAAGGCCAGGGTCCAAACCCA‑GATTTGTGTAAGTGgtatgagcgggtt                                                                        <  2:2561075‑M2/150‑14 (MQ=255)
                                                                            cAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCCCTCCTACAACGGCCAGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgggtt                                                                        <  2:2917888‑M2/150‑14 (MQ=255)
                                                                              gTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgggttca                                                                      >  1:5461146‑M2/1‑135 (MQ=255)
                                                                                 ccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGc                                                                                                                               <  2:3354704‑M1/23‑1 (MQ=255)
                                                                                 ccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGc                                                                                                                               >  1:3354704‑M1/69‑91 (MQ=255)
                                                                                  cGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCa                                                                                                    >  1:1222309/1‑117 (MQ=255)
                                                                                   ttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgcgGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg                                                                           <  1:3737531‑M1/74‑1 (MQ=255)
                                                                                   ttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgcgGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg                                                                           >  2:3737531‑M1/67‑140 (MQ=255)
                                                                                      ccTTTTGGGGGGCTTTTGGGGGAAATTTTGTTGTTGGTCTGTTTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACACCGGCCTGGGTCAAACCCCA‑GATGTGTGTACGTGgtaggagggggtccccccgcgaa                                                              >  2:733659‑M2/1‑127 (MQ=255)
                                                                                      ccTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgggttcacccgcgaa                                                              >  2:6703865‑M2/1‑127 (MQ=255)
                                                                                        ttttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAAccc                                                                                                      <  2:3436853/109‑1 (MQ=255)
                                                                                         tttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagc                                                                             >  2:3225270‑M2/1‑124 (MQ=255)
                                                                                             gCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTTCAACGGCCTGGGTCCAACCCCA‑GGTGGGTGTACGTGGTAGGAGCGGGTTGACCCGCGAAGAGGCCg                                                       >  1:6822571/1‑150 (MQ=255)
                                                                                              cggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCggg                                                                          >  2:2382232‑M1/56‑130 (MQ=255)
                                                                                                       gggggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCCCTCCAACAACAGCCAGGGTCCAAACCCA‑GAAGTGTGTTCGTGGGAGGAGCGGGTTCAACCGCGAACATGCCCGCACAAACAg                                             >  2:6253192/1‑150 (MQ=255)
                                                                                                           gAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑Ga                                                                                                 <  2:298145/94‑1 (MQ=255)
                                                                                                           ctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg                                                                           >  1:2490762‑M1/43‑116 (MQ=255)
                                                                                                            aaaTTGAGTTGTTGGTCTGATTTTTTGATGTTGTCGGTTCGGGCCTCTCCGCGGGTCAACCCGCTCCTACAACGGCCTGGGTCCAACCCCT‑GATGTTTGTACGTGGTTGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCa                                        <  2:3605669/150‑1 (MQ=38)
                                                                                                                         ggTCTGATTATTTGTTGTTGTCTGTGGGGGCGTCTCCGGGGGTGAACCGGCTCCTACACCGGCGTGGGT‑CAACCCCATGTTGTGTGTAGGTGGTTGGAGGGGTTCCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGtt                           <  2:6575716/150‑1 (MQ=255)
                                                                                                                             tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGAAACCCCTCCAACAAACGCCAGGGTCCAAACCCA‑CATTTGTGTAAGTGGTAGGGGCGGGTTCAACCGCCAAGAGGGCCGCACAAAAAGCAAAACACACACAGGGTTttat                       >  2:127308/1‑150 (MQ=255)
                                                                                                                                   tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCGCTCCTACAACGGCCTGGGGCCCACCCCA‑GGTGTGGGGACGTGGTAGGAGCGGGTTCACCCCCGGCGAGGCCGGCCCACACAGCCTCCCCCACACCGGGTGTTATTAGccc                 >  2:4630274/1‑150 (MQ=25)
                                                                                                                                          ttgtCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGgtaggagcgggttcacc                                                                    >  1:4719218‑M2/1‑75 (MQ=255)
                                                                                                                                             tCTGTTGGGGCCTCTGCGGGGGTTAACCCGCTCCTACACCGGCGTGGTTCCAACCCCT‑TTTGTGTGTCCGTGGTTGGTGGGGGTTCACCCGCGATGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAat       <  2:6546720/150‑1 (MQ=255)
                                                                                                                                              cTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtgt                                                                                            >  1:4386359/1‑64 (MQ=255)
                                                                                                                                              cTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GAtgtgt                                                                                            <  2:4386359/64‑1 (MQ=255)
                                                                                                                                              cTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAatc      <  2:4250270/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCAGCCAGAATTACGGGACCCGGGCGAGCACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCC  >  NC_002947/5875117‑5875412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.