| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2534258 | NA (NA) | 9 (0.030) | 5/264 | NT | 100% | intergenic (+393/‑14) | PP_2217/PP_2218 | enoyl‑CoA hydratase/transposase |
| ? | NC_002947 | = 2874427 | 0 (0.000) | coding (44/1302 nt) | PP_2522 | transposase | |||||
CCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC > NC_002947/2874278‑2874576 | cccTTTCCAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAAGGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:4188422‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:3352957‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:7176838‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:1669576‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:787323‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:1322054‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:1328167‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:1704982‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:2762521‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:3131106‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:3214820‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:7217977‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 2:3598153‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:4802092‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:5238674‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:5393400‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:5402784‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:619536‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:6521737‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:2643816‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:2826423‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:3003002‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:3090388‑M2/150‑1 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:3378513‑M2/1‑150 (MQ=255)cccTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 1:3598140‑M2/1‑150 (MQ=255) ttCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:4608763‑M2/1‑127 (MQ=255) ttCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:4608763‑M2/127‑1 (MQ=255) tGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT > 2:5716494‑M2/1‑122 (MQ=255) tGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGT < 1:5716494‑M2/122‑1 (MQ=255) agaAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagac < 1:6014842‑M2/150‑84 (MQ=255) agaAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagac < 1:6014822‑M2/150‑84 (MQ=255) agaAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTACGCTGGCG‑‑GGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagacct < 2:5029493‑M2/150‑86 (MQ=255) aaaaaaGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagacct < 2:4569243‑M2/150‑86 (MQ=255) aaaGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttga < 1:5935507‑M2/150‑89 (MQ=255) aaaGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttga < 1:5935493‑M2/150‑89 (MQ=255) cAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCG‑‑GGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggccgt < 1:5148803‑M2/150‑102 (MQ=255) aGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCTGGCG‑‑GGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggccctt < 1:5104679‑M2/150‑103 (MQ=255) gCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgg > 1:4569243‑M2/1‑41 (MQ=255) gggTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaa < 1:904578‑M2/150‑147 (MQ=255) ggTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaa < 1:3455916‑M2/150‑148 (MQ=255) gTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaa < 1:1909880‑M2/150‑149 (MQ=255) gTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaa < 1:7040288‑M2/150‑149 (MQ=255) gTgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaa > 1:4388176‑M2/1‑2 (MQ=255) tgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaac < 2:4639122‑M2/150‑150 (MQ=255) tgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaac < 2:1047337‑M2/150‑150 (MQ=255) tgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaac > 1:3455852‑M2/1‑1 (MQ=255) tgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaac > 1:6775192‑M2/1‑1 (MQ=255) tgcttttttctcgaatcgcgctagtacatcagcccacatcgctcgggtcttcctgactggatttcagcgaattctaccgaagaccttgaaagggatggcccttacggcgggtcactttttgtcaaacgcgacaaaaagtaaccaaaaaac > 1:3456008‑M2/1‑1 (MQ=255) | CCCTTTCAAGGTCTTCGGTAGAATTCGCTGAAATCCAGTCAGGAAGACCCGAGCGATGTGGGCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC > NC_002947/2874278‑2874576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |