BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3527694 =	230 (0.720)	26 (0.110) +ATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTC	8/200	NT	12.2%	intergenic (+489/‑208)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	= 4500696	279 (0.880)	26 (0.110) +ATGCTCCAGCAGGCGCAACAGGCCTGGCATTGGCTC	8/200	NT	12.2%	coding (13/960 nt)	PP_3987	site‑specific recombinase

Only 100 of 420 total aligned reads displayed.

TTCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGCCA  >  NC_002947/4500548‑4500845

ttCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACa                                                                                                                                                      <  1:1552629/150‑1 (MQ=11)

  cGAAAGTCGACGGGCGTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAgc                                                                                                                                                    >  2:3239896/1‑150 (MQ=17)

   gAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagc                                                                                                                                                   >  1:3630403‑M2/1‑146 (MQ=255)

    aaaGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAgcgc                                                                                                                                                  >  2:5718809/1‑150 (MQ=33)

     aaGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCa                                                                                                                                                 >  1:6416219/1‑150 (MQ=34)

      aGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaa                                                                                                                                                <  2:2571862‑M2/150‑8 (MQ=255)

      aGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCAt                                                                                                                                                >  2:7438887/1‑150 (MQ=35)

       gTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaat                                                                                                                                               <  1:1785507‑M2/150‑9 (MQ=255)

         cGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgc                                                                                                                                             >  1:7329023‑M2/1‑140 (MQ=255)

          gACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCGGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcc                                                                                                                                            <  2:4632732‑M2/150‑12 (MQ=255)

          gACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgag                                                                                                                                            <  2:3374493/150‑1 (MQ=38)

          gACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgag                                                                                                                                            >  2:6476956/1‑150 (MQ=38)

           ccGGGCTGGGGGTAGAGGGACACTGTGTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgaga                                                                                                                                           <  2:5145462/149‑1 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagtcaatgcca                                                                                                                                           >  2:5406529‑M2/1‑138 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           >  2:1343843‑M2/1‑138 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgcca                                                                                                                                           >  2:1061281‑M2/1‑138 (MQ=255)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgaga                                                                                                                                           >  2:3160010/1‑150 (MQ=39)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgaga                                                                                                                                           >  2:6076878/1‑150 (MQ=39)

           aCGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTgaga                                                                                                                                           <  1:1043016/150‑1 (MQ=39)

             gggCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATc                                                                                                                                         <  1:6557263/150‑1 (MQ=40)

                 ttGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctg                                                                                                                                     <  2:5035450‑M2/150‑19 (MQ=255)

                  tGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgt                                                                                                                                    >  2:3300148‑M2/1‑131 (MQ=255)

                   ggggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgtt                                                                                                                                   >  2:5536872‑M2/1‑130 (MQ=255)

                    gggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCg                                                                                                                                  <  2:4089168/150‑1 (MQ=255)

                     ggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgc                                                                                                                                 <  1:3972079‑M2/150‑23 (MQ=255)

                     ggTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCgg                                                                                                                                 >  2:687679/1‑150 (MQ=255)

                      gTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGt                                                                                                                                >  1:2848590/1‑150 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgct                                                                                                                          <  2:2678355‑M2/150‑30 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgct                                                                                                                          <  1:2437262‑M2/150‑30 (MQ=255)

                            gTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGAc                                                                                                                          >  1:5667735/1‑150 (MQ=255)

                              acacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctgg                                                                                                                        >  1:5297860‑M2/1‑119 (MQ=255)

                              acacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACtt                                                                                                                        <  1:2597492/150‑1 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctgga                                                                                                                       >  1:1279362‑M2/1‑118 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctgga                                                                                                                       >  2:5241837‑M2/1‑118 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTg                                                                                                                       >  1:4338786/1‑150 (MQ=255)

                               cacTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTg                                                                                                                       <  2:3727145/150‑1 (MQ=255)

                                acTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTgg                                                                                                                      <  1:2200057/150‑1 (MQ=255)

                                 cTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTCAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGa                                                                                                                     >  2:4475413/1‑150 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagca                                                                                                                    <  1:5344671‑M2/150‑36 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagca                                                                                                                    <  2:412319‑M2/150‑36 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagca                                                                                                                    <  1:3705815‑M2/150‑36 (MQ=255)

                                  tttttCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGAt                                                                                                                    <  1:3323177/150‑1 (MQ=255)

                                     ttggACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGACAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTGTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTa                                                                                                                 <  2:6391155/147‑1 (MQ=255)

                                         aCTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccag                                                                                                             >  1:1599517‑M2/1‑108 (MQ=255)

                                         aCTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGa                                                                                                             >  2:61385/1‑150 (MQ=255)

                                          cTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgccttctggagcatgcccagg                                                                                                            >  1:4116170‑M2/1‑107 (MQ=255)

                                            ttGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGaaaa                                                                                                          >  2:581262/1‑150 (MQ=255)

                                              ggCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAAtt                                                                                                        <  1:721475/150‑1 (MQ=255)

                                               gCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATAGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCACGCTCGGTACCGACTAGGATGTAGCGAAAAATg                                                                                                       >  2:4898208/1‑150 (MQ=255)

                                                cGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatg                                                                                                      >  1:1916063‑M2/1‑101 (MQ=255)

                                                cGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatg                                                                                                      <  2:3644428‑M2/150‑50 (MQ=255)

                                                      gTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTTAATGGGc                                                                                                <  1:41532/150‑1 (MQ=255)

                                                        cGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCa                                                                                              <  2:2039126/150‑1 (MQ=255)

                                                         gCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCaa                                                                                             >  2:7038679/1‑150 (MQ=255)

                                                               tGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGa                                                                                       <  2:7342350/150‑1 (MQ=255)

                                                                   cGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGa                                                                                   <  2:321830/150‑1 (MQ=255)

                                                                     gCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGaaa                                                                                 <  1:5992959/150‑1 (MQ=255)

                                                                     gCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGaaa                                                                                 <  2:4037114/150‑1 (MQ=255)

                                                                      cGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAg                                                                                >  2:2322047/1‑150 (MQ=255)

                                                                         gCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGATTGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCa                                                                             <  1:1837633/150‑1 (MQ=255)

                                                                         gCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAGGTCa                                                                             <  2:6607278/150‑1 (MQ=255)

                                                                          cTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAg                                                                            <  1:3516156/150‑1 (MQ=255)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  1:1006937/150‑1 (MQ=255)

                                                                           tCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGt                                                                           <  1:2276092/150‑1 (MQ=255)

                                                                             cAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGa                                                                                                      >  2:2809984/1‑121 (MQ=255)

                                                                             cAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGa                                                                                                      <  1:2809984/121‑1 (MQ=255)

                                                                             cAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGc                                                                         <  2:7207100/150‑1 (MQ=255)

                                                                               gaaagaaaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcgttcagcatgtgctcggcgttcagccgcg                                                                       <  1:307013‑M2/150‑81 (MQ=255)

                                                                               gaaagaaaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCg                                                                       >  1:5799182/1‑150 (MQ=255)

                                                                                  agaaaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGaaa                                                                    <  1:819171/150‑1 (MQ=255)

                                                                                  agaaaTCGGGAGCACAGCATCGGGGATCACGTAAGCGCTTTGAAGGTGGGGGTCATGGAGCGCTTACAGCGCAGGGAGATCCCGCTCGGTACCGACGTGGATGTAGCGAAAAATCAAGGGGCCAAGCGCGCCCGCACGTCACTGCCGaac                                                                    >  2:651200/1‑149 (MQ=21)

                                                                                     aaTCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATc                                                                 >  2:2888086/1‑150 (MQ=255)

                                                                                       tCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCAc                                                               >  1:6205307/1‑150 (MQ=255)

                                                                                        cGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACt                                                              <  1:5601712/150‑1 (MQ=255)

                                                                                         gggAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTc                                                             >  2:1875943/1‑150 (MQ=255)

                                                                                         gggAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTc                                                             <  1:6094563/150‑1 (MQ=255)

                                                                                           gAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGc                                                           <  1:4874488/150‑1 (MQ=255)

                                                                                            aGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGcc                                                          <  1:677949/150‑1 (MQ=255)

                                                                                                   cATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCgg                                                   >  1:5439670/1‑150 (MQ=255)

                                                                                                    aTCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGt                                                  <  1:4719960/150‑1 (MQ=255)

                                                                                                          gATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTc                                            <  1:1668284/150‑1 (MQ=255)

                                                                                                                 tAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcgttcagcatgtgctcggcgttcagccgcggtgcgttggtcaccacgcacatgccgatgccatg                                     >  1:382105‑M2/1‑36 (MQ=255)

                                                                                                                  aaGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCg                                    <  1:3239896/150‑1 (MQ=255)

                                                                                                                  aaGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCg                                    <  1:6655893/150‑1 (MQ=255)

                                                                                                                   aGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTAGGTGACGTCTTCAATCgg                                   <  2:159663/150‑1 (MQ=255)

                                                                                                                    gcgcTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGt                                  <  1:932286/150‑1 (MQ=255)

                                                                                                                    gcgcTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGt                                  <  1:7124816/150‑1 (MQ=255)

                                                                                                                      gcTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTAt                                <  2:4726339/150‑1 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACgagccaatgccaggcctgttgcgcctgctggagcatgcccaggcccatggcgttcagcatgtgctcggcgttcagccgcggtgcgttggtcaccacgcacatgccgatgccatgggcctgg                              >  1:6467571‑M2/1‑29 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGa                              >  1:1350640/1‑150 (MQ=255)

                                                                                                                        tttGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGa                              >  2:7081181/1‑150 (MQ=255)

                                                                                                                            aaTGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGt                          <  2:5924853/150‑1 (MQ=255)

                                                                                                                            aaTGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGt                          <  2:6778785/150‑1 (MQ=255)

                                                                                                                               gtgGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGTTTCCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCTGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGAt                       <  1:6828501/150‑1 (MQ=255)

                                                                                                                                     ttCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGa                                                                                                      >  1:5092967/1‑65 (MQ=255)

                                                                                                                                     ttCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTTGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATc                 >  2:3046654/1‑150 (MQ=255)

                                                                                                                                          ggAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTgg            <  1:4468725/150‑1 (MQ=255)

                                                                                                                                            aGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGa          <  2:4333721/150‑1 (MQ=255)

                                                                                                                                                 ttACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATg     >  2:1728171/1‑150 (MQ=255)

                                                                                                                                                  tACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGc    <  1:2322507/150‑1 (MQ=255)

TTCGAAAGTCGACGGGCTTGGGGTAGAGGTACACTTTTTCGACTTTGGCGTCGGGTCGCATCATGGTCGGCGAGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGGATCAGGTAAGCGCTTTGAATGTGGGGTTCATGGAGCGCTTACAGCGCATTGAGATCCCGCTCGGTACCGACTTGGATGTAGCGAAAATTGAATGGGCCAAGCTCGACCGAAAGTCAGTGCCGAAAATCACTCGCCTGCTCGGTGACGTCTTCAATCGGTATGAGCGTGATGTCATCCCTGGGAAAATGCCA  >  NC_002947/4500548‑4500845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.