| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,522,226 | A→T | 7.1% | intergenic (+70/+16) | infA → / ← clpA | translation initiation factor IF‑1/ATP‑dependent serine protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,522,226 | 0 | A | T | 7.1% | 762.2 / 35.1 | 239 | intergenic (+70/+16) | infA/clpA | translation initiation factor IF‑1/ATP‑dependent serine protease |
| Reads supporting (aligned to +/- strand): ref base A (127/94); new base T (11/6); total (139/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
TTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTCCT > NC_002947/4522077‑4522375 | gtctcACGGGCGACAAGGTCCGCGTCGAACTGACCCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCCAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCaa < 2:7239618/149‑1 (MQ=255) tcACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGACATTGCAGGGGCTGCAAGGc > 2:4006298/1‑150 (MQ=255) tcACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGc > 2:5835299/1‑150 (MQ=255) cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTACGCTCAAGCCATGAAAAAGCCCGGGCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa < 2:4494891/150‑1 (MQ=255) cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa < 1:1667973/150‑1 (MQ=255) cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa > 2:2393167/1‑150 (MQ=255) ggCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGccc < 1:5879303/150‑1 (MQ=255) cGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCt < 1:6602216/150‑1 (MQ=255) cGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCt < 1:3153694/150‑1 (MQ=255) aaGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGcac > 1:281076/1‑150 (MQ=255) gTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATc > 1:7279914/1‑150 (MQ=255) ccGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTTCAGGGGCTGCAAGGCAGCCCCTGCACATCAc > 2:42860/1‑150 (MQ=255) ccGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGCGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAc < 2:6322646/150‑1 (MQ=255) cgcgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCGACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAcg < 1:3655799/150‑1 (MQ=255) gcgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAcgc < 2:3047336/150‑1 (MQ=255) gcgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAcgc < 1:1973839/150‑1 (MQ=255) gcgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAcgc < 2:6025224/150‑1 (MQ=255) gTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGa < 2:3292509/150‑1 (MQ=255) tCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGAc > 1:4877993/1‑150 (MQ=255) gAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCt < 1:579986/150‑1 (MQ=255) cTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAg < 1:6239149/150‑1 (MQ=255) gACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCACGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGcc < 2:1658598/150‑1 (MQ=255) gCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTg > 1:6376817/1‑150 (MQ=255) gCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTg < 2:5894023/150‑1 (MQ=255) gCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCAATTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTg < 2:4107715/150‑1 (MQ=255) gTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGtt > 2:1340015/1‑150 (MQ=255) aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGaa < 1:6178684/150‑1 (MQ=255) aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGaa < 1:3898194/150‑1 (MQ=255) aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGaa < 2:2743656/150‑1 (MQ=255) cTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGt > 2:731771/1‑150 (MQ=255) cTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGt > 1:3311422/1‑150 (MQ=255) tGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc < 1:4539789/150‑1 (MQ=255) tGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc < 2:1229276/150‑1 (MQ=255) gCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAATAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGaa < 1:5944331/150‑1 (MQ=255) cAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAac < 2:3679433/150‑1 (MQ=255) cAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAac < 2:1739521/150‑1 (MQ=255) gCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTc < 2:3550047/150‑1 (MQ=255) cATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCg > 1:275536/1‑150 (MQ=255) ccgaCCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGACATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATc < 2:6784025/147‑1 (MQ=255) ccTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATGGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATc < 2:1408898/150‑1 (MQ=255) tACCGGGCGCGCTAAGCGCACGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAACTTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCGGTGGTTTCGAAGTCGAACACCAGTTCGCCATcgc < 2:38001/150‑1 (MQ=255) ccGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCgcgc < 1:3489600/150‑1 (MQ=255) tGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAgg > 2:2014420/1‑150 (MQ=255) tGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAgg > 1:7329401/1‑150 (MQ=255) tGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTGTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAgg > 1:2248604/1‑150 (MQ=255) cgcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCTGc > 2:2451406/1‑88 (MQ=39) cgcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCTGc < 1:2451406/88‑1 (MQ=39) gcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGAc < 1:612223/150‑1 (MQ=255) gcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGAc > 1:5108312/1‑150 (MQ=255) gCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGca < 2:7106355/150‑1 (MQ=255) tCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcacc > 1:3679760/1‑150 (MQ=255) tCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACAACACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcacc > 1:1047941/1‑150 (MQ=255) aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcaccac < 2:3219418/150‑1 (MQ=255) aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcaccac < 2:2280220/150‑1 (MQ=255) aaGCCATCAAAAAGCCCGGCCAGGTGCCGGGCTATATTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcaccac < 2:4492222/150‑1 (MQ=255) tGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGccacc > 1:4061938/1‑150 (MQ=255) gAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGGGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGccacca > 2:855461/1‑150 (MQ=255) aaaaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATg > 1:3207119/1‑150 (MQ=255) aaaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGc < 2:7187950/150‑1 (MQ=255) aaaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGc < 1:778487/150‑1 (MQ=255) aaaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGc > 1:3040633/1‑150 (MQ=255) aGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTc < 2:1744010/150‑1 (MQ=255) gCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCg < 2:6545956/150‑1 (MQ=255) gCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCg > 2:1076481/1‑150 (MQ=255) gCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCg > 2:3097641/1‑150 (MQ=255) cccGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCgg > 1:6461501/1‑150 (MQ=255) ccGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGc > 1:5828866/1‑150 (MQ=255) cGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCGCGGcc > 2:6707872/1‑150 (MQ=255) aGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTc > 2:2628873/1‑150 (MQ=255) ggTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcac < 2:5549099/125‑1 (MQ=255) ggTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcac > 1:5549099/1‑125 (MQ=255) gTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGc > 1:347803/1‑150 (MQ=255) tGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGcc < 1:4750681/150‑1 (MQ=255) gCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAg > 2:1507118/1‑150 (MQ=255) tgtgCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATctcc < 1:6770058/150‑1 (MQ=255) tgtgCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATCCTCGGCCAGCTCGCCAAACAGGATctcc > 1:6003368/1‑150 (MQ=255) gCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCg > 1:1460745/1‑150 (MQ=255) ccTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCgg > 1:1282400/1‑150 (MQ=255) cTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCGGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGc > 2:4580982/1‑150 (MQ=255) cTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGc > 1:5288178/1‑150 (MQ=255) cTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGc > 1:4016580/1‑150 (MQ=255) tCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGcc < 1:2036005/150‑1 (MQ=255) acttGCAGGGGCTGCAAGGCAGCCCCTGCACATCCCGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCCCGCCCCCCTGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGc < 2:5628437/148‑1 (MQ=255) aaTTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGc < 1:1507118/150‑1 (MQ=255) tGCAGGGGCTGCCTTGCAGCCCCTGCGCATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCCGCGGCCGc > 2:6051596/1‑150 (MQ=255) cAGGGGCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 2:892966/1‑150 (MQ=255) cAGGGGCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 2:4889434/1‑150 (MQ=255) cAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt < 2:7279914/150‑1 (MQ=255) ggggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGa > 1:6847633/1‑150 (MQ=255) gggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGAt > 2:2230763/1‑150 (MQ=255) gggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGAt < 2:7080734/150‑1 (MQ=255) ggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATc > 2:5099883/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 2:6147595/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 2:2164978/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 1:1841184/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 1:1129837/1‑150 (MQ=255) gCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGt < 1:560627/150‑1 (MQ=255) aaGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTcc > 2:6533231/1‑150 (MQ=255) aaGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTcc > 1:6642012/1‑150 (MQ=255) aaGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTcc < 1:42860/150‑1 (MQ=255) | TTCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTCCT > NC_002947/4522077‑4522375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |