| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,647,606 | A→G | 5.7% | Q185R (CAG→CGG) ‡ | PP_4107 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,647,606 | 0 | A | G | 5.7% | 1323.3 / 40.8 | 401 | Q185R (CAG→CGG) ‡ | PP_4107 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (180/198); new base G (14/9); total (194/207) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 410 total aligned reads displayed.
ATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCG > NC_002947/4647457‑4647755 | atacGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGACGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCa > 2:1758328/4‑150 (MQ=255)aTTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCa > 1:6055431/1‑150 (MQ=255) ttCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAg > 2:4179867/1‑150 (MQ=255) ttCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAg > 1:4128478/1‑150 (MQ=255) aCCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGgcgc > 1:2282748/1‑150 (MQ=255) tGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgt < 2:5985343/150‑2 (MQ=255) tGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgt < 2:6302990/150‑2 (MQ=255) tGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctga > 2:1865223/1‑150 (MQ=255) ggTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCTctgtc < 2:6355784/150‑3 (MQ=255) ggTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCTGGGCGctgtc < 2:665077/150‑3 (MQ=255) gTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGTCAGCGCCTGGGCGctgtcg > 1:5371411/1‑147 (MQ=255) gTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgact < 1:3987739/150‑1 (MQ=255) gTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgact < 2:7221969/150‑1 (MQ=255) gTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgact > 1:2486504/1‑150 (MQ=255) gTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgact < 2:5891428/150‑1 (MQ=255) aCAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgactga < 1:5739061/150‑1 (MQ=255) aCAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgactga < 1:2582951/150‑1 (MQ=255) aCAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgactga < 2:7292706/150‑1 (MQ=255) cAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGTCAGCGCCTGGGCGctgtcgaaa < 2:5371411/150‑7 (MQ=255) aGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGc > 1:7266282/1‑150 (MQ=255) gCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCAc > 1:7201198/1‑150 (MQ=255) ccAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCAcc > 1:3380454/1‑150 (MQ=255) gCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTg < 2:911118/150‑1 (MQ=255) ggACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGtt < 2:803708/150‑1 (MQ=255) gCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCTGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGc > 1:1464590/1‑150 (MQ=255) cTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgt < 1:1723137/150‑1 (MQ=255) tttttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtg > 2:1124583/1‑150 (MQ=255) tttttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtg > 1:356262/1‑150 (MQ=255) ttttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtgt < 1:7128152/150‑1 (MQ=255) tcttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTcgc < 2:1305056/150‑1 (MQ=255) cccgggCCAGGTGCCCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTcgcg > 2:5147348/5‑150 (MQ=255) ttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAg < 2:4101395/123‑1 (MQ=255) ttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCgg < 1:2989135/150‑1 (MQ=255) ttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCgg < 2:3130282/150‑1 (MQ=255) tcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGc < 1:7418999/150‑1 (MQ=255) gCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCCCCGCCTGTTGCAATGCGTGTCGCGGCCgg > 2:467768/1‑150 (MQ=255) gCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCgg > 2:5831092/1‑150 (MQ=255) ccAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGa < 2:5031521/150‑1 (MQ=255) ggtgcccTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGc > 1:6753095/6‑150 (MQ=255) gggCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGc < 2:6496206/150‑1 (MQ=255) ggCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGcc > 1:3718317/1‑150 (MQ=255) cACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTg < 2:2758929/150‑1 (MQ=255) aCCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTgg < 2:2651863/150‑1 (MQ=255) ccTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGc < 1:6284191/150‑1 (MQ=255) ccTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGc < 2:3731709/150‑1 (MQ=255) cTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCa > 1:5665096/1‑150 (MQ=255) gCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGa < 1:1800776/150‑1 (MQ=255) gCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGa < 2:2993871/150‑1 (MQ=255) cccGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGaa < 2:2259245/150‑1 (MQ=255) cccGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGaa < 2:3867440/150‑1 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTggg > 1:4676538/1‑150 (MQ=255) cTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTggg > 2:1443055/1‑150 (MQ=255) cGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTgg < 1:5048237/150‑1 (MQ=255) gttCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCa < 2:4016504/150‑1 (MQ=255) tCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATa < 1:7053798/150‑1 (MQ=255) cAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAg < 1:4534233/150‑1 (MQ=255) aGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc > 1:4013512/1‑150 (MQ=255) aGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGc > 2:2424367/1‑150 (MQ=255) gaagaaGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTg < 1:795944/113‑1 (MQ=255) gaagaaGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAg < 1:99825/150‑1 (MQ=255) agaagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCACCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGaa < 2:6832090/150‑1 (MQ=255) gaagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGtt < 1:6718617/137‑1 (MQ=255) aagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACa < 1:1155109/150‑1 (MQ=255) aagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACa < 1:1370199/150‑1 (MQ=255) aagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACa < 1:2342762/150‑1 (MQ=255) tgCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTg > 2:3306430/1‑119 (MQ=255) tgCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTg < 1:3306430/119‑1 (MQ=255) gCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCa > 1:4466814/1‑150 (MQ=255) tggctggCCAGCAGCTGCGGGCTGCACACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGc > 1:621953/7‑150 (MQ=255) cAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCcgcg < 2:1545719/150‑1 (MQ=255) cAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCcgcg > 1:7341832/1‑150 (MQ=255) aGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGa < 1:3210475/98‑1 (MQ=255) aGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCgcgc > 2:4428633/1‑150 (MQ=255) gCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCt > 1:4877438/1‑150 (MQ=255) gCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCt > 1:3440775/1‑150 (MQ=255) ccGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTc < 2:7248829/150‑1 (MQ=255) ccGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTc < 1:3536873/150‑1 (MQ=255) gCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGa > 1:2157505/1‑150 (MQ=255) gctgctGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGacac < 1:5876381/150‑1 (MQ=255) tgctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGt < 2:551630/150‑1 (MQ=255) gctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGtt < 2:2032666/150‑1 (MQ=255) ctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTc < 1:481370/150‑1 (MQ=255) ctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTc > 1:4979298/1‑150 (MQ=255) gccagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTAc < 2:5568885/150‑1 (MQ=255) gccagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTAc > 1:1022891/1‑150 (MQ=255) gccagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTAc < 2:7126625/150‑1 (MQ=255) cagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCt > 2:5241431/1‑150 (MQ=255) agccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtg > 2:3518935/1‑150 (MQ=255) agccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtg < 2:4575784/150‑1 (MQ=255) gccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGGCGCGCTTCGACACGTTCTACCtgc < 1:2895278/150‑2 (MQ=255) gccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt < 1:4188558/150‑1 (MQ=255) gccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCtgt < 1:1965025/150‑1 (MQ=255) caCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTgtgt > 2:6012950/1‑150 (MQ=255) gTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATcc > 1:6596301/1‑150 (MQ=255) cGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcgcgc > 2:7362561/1‑150 (MQ=255) agtcAGCGCCTGGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCTTAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcgcgc > 2:6955952/4‑150 (MQ=255) gtcAGCGCCTGGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcgcgcg > 2:4805658/3‑150 (MQ=255) aCAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCgg > 2:1613109/1‑150 (MQ=255) gcgcCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCa > 1:5233629/1‑150 (MQ=255) ccAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGc > 2:358234/1‑83 (MQ=255) | ATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCG > NC_002947/4647457‑4647755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |