BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,680,332	G→T	14.4%	intergenic (+36/+68)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,680,332	0	G	T	14.4%	387.9 / 9.5	184	intergenic (+36/+68)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
Reads supporting (aligned to +/- strand): ref base G (38/96); new base T (8/21); total (51/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 184 total aligned reads displayed.

GCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA  >  NC_002947/4680184‑4680479

gctcggCAGCCACCGTGCCGCCGCCCGACAACGACGCCGCCCAGGACACGGCCCGGGCGACCCCGGGCGACGGAATGGGCGTGTATGCCGGGGTGTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGa                                                                                                                                                      <  2:6592970/145‑1 (MQ=255)

 cTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGaa                                                                                                                                                     <  2:1146366/150‑1 (MQ=255)

  tATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAAt                                                                                                                                                    <  2:3961979/150‑1 (MQ=255)

   aTGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAAtt                                                                                                                                                   <  2:3240686/150‑1 (MQ=255)

   aTGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAAtt                                                                                                                                                   <  2:1536857/150‑1 (MQ=255)

     gCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTT‑TCCCG‑CGAATGCGGC‑ATTGAAtttt                                                                                                                                                 >  2:5803546/1‑149 (MQ=255)

       aGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTT‑AACC‑‑CGAAAGCGGCAATTGAAtttac                                                                                                                                                >  1:212075/1‑148 (MQ=255)

              gTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCAt                                                                                                                                        <  1:516811/150‑1 (MQ=255)

              gTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTT‑AACCG‑CCGATTCGTG‑AATTAATTTGCCGCCGCAt                                                                                                                                        >  2:4987275/1‑150 (MQ=255)

                  cGCCGGCCTACACCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTcgc                                                                                                                                    <  2:4142955/150‑1 (MQ=255)

                   gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTcgc‑g                                                                                                                                  <  2:2624439/150‑1 (MQ=255)

                   gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTcgc‑g                                                                                                                                  <  2:935962/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACCATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  2:7384978/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATTCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  1:2955303/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:4637701/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:7225851/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:3934243/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:7335258/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  1:5627902/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:4637637/150‑1 (MQ=37)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  1:5937068/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  1:7009150/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  2:1328067/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑gg                                                                                                                                 <  1:5333293/150‑1 (MQ=255)

                    ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTGCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:3488774/150‑1 (MQ=37)

                     cGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑ggg                                                                                                                                <  1:2188705/150‑1 (MQ=255)

                      ggCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGt                                                                                                                               <  2:135797/150‑1 (MQ=255)

                       gCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTa                                                                                                                              <  2:5869333/150‑1 (MQ=255)

                         cTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTaaa                                                                                                                            <  1:1940611/150‑1 (MQ=255)

                         cTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTT‑TACCG‑CGAAATCGTA‑AATGAATTTGGCGACCCAGTAGC‑GGGTaaa                                                                                                                            >  1:4888901/1‑150 (MQ=255)

                          tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑c                                                                                                                          <  1:3639520/150‑1 (MQ=255)

                           aCAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑TCCCG‑CGCAGGCGGC‑ATTTAAATTTGCGACGCAATCGC‑GGGTaaaac                                                                                                                          >  2:4513022/1‑148 (MQ=255)

                           aCAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTT‑TCCCC‑CGCCTGCGTC‑CGTGGATTTTCCGCCGCCTTCGC‑GGGGTAA‑cc                                                                                                                         >  2:35886/1‑150 (MQ=255)

                             aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGCATGCGGC‑ATTGAATTTGGCGACGCAGTCGC‑GGGGCAA‑cccc                                                                                                                       >  2:3873266/1‑149 (MQ=255)

                                  cgCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCt                                                                                                                  <  2:1760007/150‑1 (MQ=255)

                                   gCCGGCCTGGACAATGCCGGTTCGACACCGGGCGATGGTTTTGGCGTGTTTGCGGGGGTTTCCTACAGCTTCGGCTGAGGGGTGGGCGG‑GGTTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCTTTCGG‑GGTTAAA‑CCCGCTCCTa                                                                                                                 <  2:5280214/150‑1 (MQ=255)

                                    ccGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTAAACCC‑CCAAT‑CGTC‑ATTGTATTTTACGACCCAATAGCGGGGTAAA‑ccccaccgaa                                                                                                                 >  1:5442988/1‑143 (MQ=255)

                                            gACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑AACCG‑CGCATGCGGC‑CTTGCATTTGGCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAggggg                                                                                                        >  2:7212382/1‑149 (MQ=38)

                                               aaTTCCCGTTCGACACGGGGGGAAGGATTTGGGGTGTATGCCGGGTTTTCCTACAGCTTCCGGTGACGGGTGGGGGC‑AGGTTG‑ACCCG‑CGAATGCGTC‑TTTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCttt                                                                                                     <  2:952367/150‑1 (MQ=37)

                                                     cGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTcg                                                                                                                                     >  1:557622/1‑114 (MQ=255)

                                                       ttCGACACCGGGCGAAGGATTTGGCGTTTTTGCCGGGGTTCCCTACCGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTTAATTTGCCGCCGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCAcagca                                                                                             <  2:1999740/150‑1 (MQ=38)

                                                       ttCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCAcagca                                                                                             <  2:2961412/150‑1 (MQ=255)

                                                                ggggGATGGTTTGGGCGTGTAGGCGGGGGTTCCCTCCCGCTGCCGCTGCGGGGGGGGCGG‑GGGTTC‑ACCCG‑CGACGGCGTC‑TTTGAATTGGCCGCCG‑ATTGGG‑GGGTAAACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg                                                                                    <  1:3537352/150‑1 (MQ=255)

                                                                gggCGATGTATTGGGCGTGTAGGCGGGGGTTTCCTACCGCTTCCGCTGACGGGGGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGG‑GGTTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg                                                                                    <  1:7258350/150‑1 (MQ=37)

                                                                    gAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑TCCCG‑CGAATTCGTG‑ATTGAATTTGCCGACGCCGTCGC‑GGGTAAA‑CCCGCGCCGAACCAGGGGCGTTGCCCCGGCGGGTTAGGGGttg                                                                                >  2:447952/1‑149 (MQ=255)

                                                                    gAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑AACCGCCAAAGGCGCC‑A‑TGCATTTGCCGACCCCATAGC‑CGGTAAA‑CCCCCTCCGCCACACGGGCGGTGCCCCGCACGGTTATGGGtta                                                                                >  2:5063974/1‑149 (MQ=255)

                                                                    gAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑AACCG‑CGAATTCGTC‑ATTGAATTTGGCGACGCATTCGC‑GGGTAAA‑CCCGCGCCGACACAGGGGCGTTGCACAGCCGGCTTAGGGGTTc                                                                                >  2:2367909/1‑150 (MQ=38)

                                                                     aaGGATTTGGCGTGTAGGCCGGGGTTTCCTACAGCTCCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGCATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAC‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCa                                                                               <  2:4419906/150‑1 (MQ=255)

                                                                      ttcgtaaggCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTT‑ACCC‑‑CGAAATCGTC‑AATTAAATTTCCGGCGCAATAGC‑GGGTAAA‑ACCCCACCAAAACACGGGCGTTTCACAGCAGGATTAGGGGTTCAg                                                                              >  2:3598080/8‑150 (MQ=255)

                                                                         aTTGGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                           <  2:7185130/150‑1 (MQ=255)

                                                                           ttGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGc                                                                         <  2:2443603/150‑1 (MQ=255)

                                                                            tGGCGTTTCTGCGGGGGTTTCCTCCCGCTCCCGCTGCGGGGGGGGCGC‑GGTTTT‑CCCCG‑CTTTGGCTTC‑TTTTATTTGGCCCACGAATTGGG‑GTTTAAC‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGcc                                                                        <  1:3994312/150‑1 (MQ=255)

                                                                            gggCGTGTATGCCGGGGTTACCTACAGCTTCCGCTGAGGGGTGGGGGC‑GGTTTT‑ACCCG‑CTAATGCTTA‑TTTTATTTTCCCGACGCTTTCGC‑GGTTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGcc                                                                        <  1:6421372/149‑1 (MQ=255)

                                                                                gtgtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGATTGCTTC‑ATTTAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGt                                                                    <  2:2845233/150‑1 (MQ=255)

                                                                                gtgtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGc                                                                                                                                          >  2:7106914/1‑82 (MQ=255)

                                                                                 tttATGCCGGGTTTACCAACAGATTCCGCTGACGGGTGGCCGC‑GGTATA‑ACCCG‑CGAATGCTTA‑ATTTAATTTCCCCACCAATTCGC‑GTTAAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGtt                                                                   <  1:2243376/148‑1 (MQ=255)

                                                                                  gtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGTGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTc                                                                  <  1:7422755/150‑1 (MQ=255)

                                                                                   tATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑TCCCG‑CGAAATCGGG‑AGTTAATTTTGCGGCGCCTTAGC‑GGGGAAA‑ACCCCGGCGACACCGGGGGGGGGGGCCGCCGGGTTTGGGGGTGAGACCGCCCGGttga                                                                 >  2:6296698/1‑148 (MQ=255)

                                                                                     tGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGtttcgg                                                               <  2:5566674/150‑5 (MQ=255)

                                                                                     tGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAAc                                                               <  2:7214037/150‑1 (MQ=255)

                                                                                        cGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 >  1:1120291/1‑82 (MQ=14)

                                                                                        cGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑gg                                                                                                                                 <  2:1120291/82‑1 (MQ=14)

                                                                                           ggTTTCCTCCCGCTGCCGCGGCCGGGGGGGCGC‑GGGTTT‑ACCCG‑CGCATGCGTC‑ATTGAATTGGCCGACGCATGCGC‑GGGTACA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc                                                         <  1:7277894/150‑1 (MQ=255)

                                                                                           ggTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc                                                         <  2:4149983/150‑1 (MQ=255)

                                                                                              ttCCTACAGCTTCGGCTGTGGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCTTC‑TTTGATTTTGCCGACGATTTGGG‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCAt                                                      <  1:5295272/150‑1 (MQ=255)

                                                                                                 cTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                                   <  1:6737364/150‑1 (MQ=255)

                                                                                                  tACTGCTTCCGGTGTGGGGTGGGGGC‑GGTTTT‑ACCCG‑GTAATGCTTA‑ATTTAATTTGCCGACGCTTTGGC‑GGTTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACg                                                  <  1:6940421/150‑1 (MQ=255)

                                                                                                  tACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑AACCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTAGC‑GGGTAAA‑ACCCCTCCAACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCCCCCAGTTCAACATCACCCATGACg                                                  >  2:6737364/1‑150 (MQ=38)

                                                                                                      gCTTCCGCTGAGGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCaaa                                              <  2:5591979/150‑1 (MQ=255)

                                                                                                       cTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc                                             <  2:5418882/150‑1 (MQ=255)

                                                                                                       cTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc                                             <  2:5492053/150‑1 (MQ=255)

                                                                                                          ccGCTGAGGGGTGGGCGC‑GGTTTT‑ACCGG‑CTATTGCTTC‑ATTTAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTg                                          <  1:5803546/150‑1 (MQ=255)

                                                                                                            gCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCTTTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                        <  1:6072902/150‑1 (MQ=255)

                                                                                                            gCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                        <  2:6214972/150‑1 (MQ=255)

                                                                                                                   ggTGGGCGC‑GGGTTT‑ACCCG‑CGACTGCGTC‑ATTGAATTTGCCGACGCTTTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAAc                                 <  1:2432403/150‑1 (MQ=255)

                                                                                                                      gggCGG‑GGGTTT‑CCCCG‑CTAATGGTTC‑TTTTATTTGGCCGACGATTTGGC‑GGTAAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGcc                              <  1:331813/150‑1 (MQ=255)

                                                                                                                       ggCGG‑GGGTTT‑CCCCG‑CGTATGCGTA‑TTTTTTTTTGCCGACTAATCGGG‑GTGTAAC‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCt                             <  1:2213157/150‑1 (MQ=255)

                                                                                                                               gTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa                      >  1:5036540/1‑150 (MQ=255)

                                                                                                                                ttt‑ACCCG‑CTATTGCGTC‑ATTTATTTTGCCGACGCTTTCGG‑GGTTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                     <  1:737185/150‑1 (MQ=255)

                                                                                                                                ttt‑ACCCG‑CGAATGCGTC‑ATTGATTTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                     <  2:1376123/150‑1 (MQ=255)

                                                                                                                                     cccG‑CGAATGCTTA‑TTTTAATTTGCCGACGCTTTCGC‑GGTAAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                 <  1:1377852/150‑1 (MQ=255)

                                                                                                                                      ccG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc                                                         <  1:2517657/109‑1 (MQ=21)

                                                                                                                                      ccG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc                                                         >  2:2517657/1‑109 (MQ=21)

                                                                                                                                      ccG‑CGAATGCGTC‑GGCAAATTCAATGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                >  1:2981085/1‑150 (MQ=37)

                                                                                                                                      ccG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                >  2:3341215/1‑150 (MQ=255)

                                                                                                                                        g‑cgAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg              >  1:5514179/1‑150 (MQ=255)

                                                                                                                                            aaTGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCt           >  1:6029498/1‑150 (MQ=255)

                                                                                                                                             aTGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCtt          <  2:3639385/150‑1 (MQ=255)

                                                                                                                                              tGCTTC‑ATTTAATTTGCCGACGATTTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg         <  1:2787081/150‑1 (MQ=255)

                                                                                                                                              tGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg         <  1:2367835/150‑1 (MQ=255)

                                                                                                                                                 gTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa      >  2:2330014/1‑150 (MQ=255)

                                                                                                                                                 gTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa      >  1:7345494/1‑150 (MQ=255)

                                                                                                                                                 gTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa      >  1:4221745/1‑150 (MQ=255)

                                                                                                                                                   taaTTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAt     <  1:1659559/148‑1 (MQ=255)

                                                                                                                                                   c‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt    >  2:210178/1‑150 (MQ=255)

                                                                                                                                                   c‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt    >  2:212282/1‑150 (MQ=255)

                                                                                                                                                   c‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt    <  2:437106/150‑1 (MQ=255)

                                                                                                                                                    ctttGAATTTGCCGACGCTTTCGC‑GGTTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt    <  1:4207697/148‑1 (MQ=255)

                                                                                                                                                      ttGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa  <  2:4062581/150‑1 (MQ=255)

                                                                                                                                                      ttGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa  <  2:4888901/150‑1 (MQ=255)

GCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTT‑ACCCG‑CGAATGCGTC‑ATTGAATTTGCCGACGCATTCGC‑GGGTAAA‑CCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA  >  NC_002947/4680184‑4680479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`