| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,680,340 | C→T | 11.7% | intergenic (+44/+60) | PP_4137 → / ← chrR | outer membrane siderophore receptor/chromate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,680,340 | 0 | C | T | 11.7% | 470.2 / 46.5 | 179 | intergenic (+44/+60) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase |
| Reads supporting (aligned to +/- strand): ref base C (46/112); new base T (5/16); total (51/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.44e-02 | |||||||||||
Only 100 of 182 total aligned reads displayed.
CGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGA > NC_002947/4680193‑4680489 | cGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGa < 2:414486/150‑1 (MQ=255) gACCGCGACGCCGGCCCACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTGGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGAc < 1:5627795/150‑1 (MQ=255) aCCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCCCGCATGCGGCCTTGGATTTGGCgccc > 2:5068731/1‑147 (MQ=255) gTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCAt < 1:516811/150‑1 (MQ=255) gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTcgcg < 2:2624439/150‑1 (MQ=255) gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTcgcg < 2:935962/150‑1 (MQ=255) ccGGCCTACAACGACGCCGGCCAGGACCATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCgg < 2:7384978/150‑1 (MQ=255) ccGGCCTACAACGACGCCGGCCAGGACAATTCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCgg < 1:2955303/150‑1 (MQ=255) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 2:4637701/150‑1 (MQ=37) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 1:2171907/150‑1 (MQ=37) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 2:7225851/150‑1 (MQ=37) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 2:3934243/150‑1 (MQ=37) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 2:2177102/150‑1 (MQ=37) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCgg < 2:7139555/150‑1 (MQ=255) ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCgg < 2:1328067/150‑1 (MQ=255) cGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCggg < 1:2188705/150‑1 (MQ=255) ggCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGt < 2:135797/150‑1 (MQ=255) ggCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGt < 2:3574636/150‑1 (MQ=255) gCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑a < 2:5869333/150‑1 (MQ=255) ccTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑aa < 1:6914524/150‑1 (MQ=255) cTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑aaa < 1:1940611/150‑1 (MQ=255) cTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTACCGCGAAATCGTAAATGAATTTGGCGACCCAGTAGCGGGT‑aaa > 1:4888901/1‑150 (MQ=255) tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAAc < 2:32014/150‑1 (MQ=255) tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAAc < 1:3639520/150‑1 (MQ=255) tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAAc < 1:5216451/150‑1 (MQ=255) aCAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTCCCCCGCCTGCGTCCGTGGATTTTCCGCCGCCTTCGCGGGG‑TAAcc > 2:35886/1‑150 (MQ=255) aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGCATGCGGCATTGAATTTGGCGACGCAGTCGCGGGG‑CAAcccc > 2:3873266/1‑149 (MQ=255) acgacgCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT‑AAACCCGc < 2:1925325/150‑1 (MQ=25) ccAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAACCGCGAATGCGTCATTTAATTTTCCGACGCATTCGCGGGT‑AAACCCCCGCCAAAACAg > 2:2432403/1‑150 (MQ=39) aCAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACCGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTTATTTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCg < 2:2566229/150‑1 (MQ=255) acggCCGGTTCGACCCGGGGCGACGGATTGGGGGTGTTTGCGGGGGTTTCCTCCCGCTTCGGGGGCGGGGTGGGCGGGGTTTTACCGGCGACTGCGTCATTGAATTTGCCGACGCATTCGGGGGT‑AACCCCGCTCCTACACAGGGGCGtt < 1:2327155/147‑1 (MQ=19) aaggCCCGTTCGACACCGGGCGATGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGtt < 2:3609922/147‑1 (MQ=255) aaTTCCCGTTCGACACGGGGGGAAGGATTTGGGGTGTATGCCGGGTTTTCCTACAGCTTCCGGTGACGGGTGGGGGCAGGTTGACCCGCGAATGCGTCTTTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCttt < 2:952367/150‑1 (MQ=37) cGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTcg < 2:557622/114‑1 (MQ=255) cGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTcg > 1:557622/1‑114 (MQ=255) ttCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCCACAGCTTCCGCGGAGGGGTGGGCGGGGTTTTACCCGCTAATGCGACATTGAATTTGCCGACGAATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCAcagca < 1:2981155/150‑1 (MQ=38) cGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTACCCCCCAAAGCGGCAATTAATTTGCCGACGCATTAGCGGGG‑TAAACCGCACCAACACACGGGCGGTGCACCGCAGGATTAgg > 2:4511288/1‑150 (MQ=255) cGGGCGAAGGATTGGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAgg < 2:4477200/150‑1 (MQ=255) gggCTATGGTTTGGGGGTGTAGGCGGGGTTTTCCACCCGCTCCGGCGGCGGGGGGGGCGGGGGTTTCCCCGGGATGGCTTATTTGATTTGGCCGAC‑CATTTGGGGGTAAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg < 1:6972380/150‑1 (MQ=255) gggCGATGTATTGGGCGTGTAGGCGGGGGTTTCCTACCGCTTCCGCTGACGGGGGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGGGGTT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg < 1:7258350/150‑1 (MQ=37) gggCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAggg < 2:3950683/150‑1 (MQ=255) aaGGATTTGGCGTGTAGGCCGGGGTTTCCTACAGCTCCCGCTGACGGGTGGGCGCGGGTTTACCCGCGCATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCa < 2:4419906/150‑1 (MQ=255) gATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAACCGCGAATGCGGCATTGAATTTGGCGACGCATTAGCGGGT‑TAAACCGCAACTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTccggc > 2:2367835/1‑146 (MQ=255) ttttGGCGTGTTTGCGGGGGTTTCCACCAGCTTCCGCTGAGGGGTGGGCGCGGGTTTACCGGCTAATGCTTAATTTAATTTGCCGACGATTTCGCGGTT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc < 1:5333217/149‑1 (MQ=255) tGGCGTTTCTGCGGGGGTTTCCTCCCGCTCCCGCTGCGGGGGGGGCGCGGTTTTCCCCGCTTTGGCTTCTTTTATTTGGCCCACGAATTGGGGTTT‑AACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGcc < 1:3994312/150‑1 (MQ=255) gggCGTGTATGCCGGGGTTACCTACAGCTTCCGCTGAGGGGTGGGGGCGGTTTTACCCGCTAATGCTTATTTTATTTTCCCGACGCTTTCGCGGTT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGcc < 1:6421372/149‑1 (MQ=255) gCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGCCGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCt < 1:2406965/150‑1 (MQ=255) gtgtCTGCCGGGGTTCCCTCCCGCGGCCGCTGAGGGGGGGGCGGGGTTTTCCCGGCTAAGGCGTCTTTTATTTTGCCGACGCATCCGCGGTT‑AACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGt < 1:3419708/150‑1 (MQ=255) gtgtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGc > 2:7106914/1‑82 (MQ=255) gtgtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGc < 1:7106914/82‑1 (MQ=255) gttggcgggggTTTCCTACCGCTGCCGGTGCGGGGGGGGGGGGGGTTTCCCCGCGATGGCGTATTTGAATTGGCCGCGGCATTGGGGGGT‑AACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTc < 1:5782162/143‑1 (MQ=255) gtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGTGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTc < 1:7422755/150‑1 (MQ=255) tGCCGGGGTTTCCTACCGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAAc < 2:4519889/150‑1 (MQ=255) tGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGtttcgg < 2:5566674/150‑5 (MQ=255) tGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAAc < 2:7214037/150‑1 (MQ=255) cGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg > 1:1120291/1‑82 (MQ=14) cGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCgg < 2:1120291/82‑1 (MQ=14) cGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAACCCCGAAATCGTCATTTAATTTTCCGACGCAATAGCGGGT‑AAAACCGCACCTACACAGGGGCGGTGCACACCAGGAATAGGGGTTCAGACCGCCCGGGTCAAcata > 2:7317607/1‑147 (MQ=255) ggTTTCCTCCCGCTGCCGCGGCCGGGGGGGCGCGGGTTTACCCGCGCATGCGTCATTGAATTGGCCGACGCATGCGCGGGT‑ACACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc < 1:7277894/150‑1 (MQ=255) ggTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGACTTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc < 2:4930318/150‑1 (MQ=255) gTTTCCTCCAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAccc < 2:7198475/150‑1 (MQ=255) tACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAACCGCGAATGCGTCATTGAATTTGCCGACGCATTAGCGGGT‑AAAACCCCTCCAACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCCCCCAGTTCAACATCACCCATGACg > 2:6737364/1‑150 (MQ=38) cTTCGGCTGAGGGGTGGGCGGGGGTTTCCCGGCTATGGCTTCTTTTATTTGGCCGACGCTTTGGGGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc < 1:2726974/150‑1 (MQ=255) cTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc < 2:5492053/150‑1 (MQ=255) cTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAAc < 2:1720166/150‑1 (MQ=255) gCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCTTTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc < 1:6072902/150‑1 (MQ=255) gCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc < 2:6214972/150‑1 (MQ=255) ggggggCGGGGTTTCACCCGCTAATGGGTCTTTTAATTGGCCGCCGTTTTGGGGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAAc < 1:35886/147‑1 (MQ=255) ggTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAAc < 2:6705676/150‑1 (MQ=255) ggCGGGGGTTTCCCCGCGTATGCGTATTTTTTTTTGCCGACTAATCGGGGTGT‑AACCCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCt < 1:2213157/150‑1 (MQ=255) ggCGCGTGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCt < 2:5304047/150‑1 (MQ=255) gcgGGTTTACCGGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCa < 2:5621153/150‑1 (MQ=255) gTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGaa > 1:5036540/1‑150 (MQ=255) tttACCCGCTATTGCGTCATTTATTTTGCCGACGCTTTCGGGGTT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc < 1:737185/150‑1 (MQ=255) tttACCCGCGAATGCGTCATTGATTTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc < 2:1376123/150‑1 (MQ=255) cccGCGAATGCTTATTTTAATTTGCCGACGCTTTCGCGGTA‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc < 1:1377852/150‑1 (MQ=255) ccGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc < 1:2517500/109‑1 (MQ=21) ccGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCAcc > 2:2517500/1‑109 (MQ=21) ccGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg > 1:6725888/1‑150 (MQ=37) ccGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg > 1:5389858/1‑150 (MQ=255) ccGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg > 2:500970/1‑150 (MQ=255) ccGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg > 2:2892444/1‑150 (MQ=255) ccGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg > 2:3341215/1‑150 (MQ=255) gcgAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg > 1:5514179/1‑150 (MQ=255) tGCTTCATTTAATTTGCCGACGATTTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg < 1:2787081/150‑1 (MQ=255) tGCGTCATTGAATTTGCCGACGCATTCGCGGTT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTg < 1:5848651/150‑1 (MQ=255) cttCATTTAATTCGCCGACGAATTCGCGGCT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTc < 1:5942894/148‑1 (MQ=255) gTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa > 1:7345494/1‑150 (MQ=255) gTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa > 1:4221745/1‑150 (MQ=255) taaTTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAt < 1:1659559/148‑1 (MQ=255) cATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt > 2:212282/1‑150 (MQ=255) cATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt < 2:437106/150‑1 (MQ=255) cATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt > 2:209521/1‑150 (MQ=255) aTTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTg > 2:421366/1‑150 (MQ=255) ttGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa < 2:4888901/150‑1 (MQ=255) ttGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa < 2:4062581/150‑1 (MQ=255) ttGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa > 2:3424817/1‑150 (MQ=255) aTTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCtt > 1:1157106/1‑150 (MQ=255) aTTTGCCGACGCATTCGCGGGA‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCtt < 2:374718/150‑1 (MQ=255) ccGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCg > 2:7363892/1‑150 (MQ=255) | CGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCATTGAATTTGCCGACGCATTCGCGGGT‑AAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGA > NC_002947/4680193‑4680489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |