| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,725,847 | A→T | 5.1% | intergenic (+77/+18) | PP_4177 → / ← PP_4178 | hypothetical protein/dienelactone hydrolase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,725,847 | 0 | A | T | 5.1% | 1087.5 / 31.3 | 314 | intergenic (+77/+18) | PP_4177/PP_4178 | hypothetical protein/dienelactone hydrolase family protein |
| Reads supporting (aligned to +/- strand): ref base A (134/164); new base T (11/5); total (145/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.44e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
Only 100 of 319 total aligned reads displayed.
CCGGGCCAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGT > NC_002947/4725698‑4725995 | ccgggccAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCaa > 2:4582794/1‑150 (MQ=255) cgggccAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCaaa < 2:2934215/150‑1 (MQ=255) gggccAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAag < 1:1554601/150‑1 (MQ=255) ggccAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAagc < 2:1643018/150‑1 (MQ=255) aGGTGGGCTGCGCGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTAACCTCGGAGATCGGGGATGGGCACAGGTCGGCGGATGGGCGCAGTCCACCGTCGCGAAGGAGCGGGTTCACCCGCGAATGGCTGCAAAGCAGcc > 2:1397611/1‑150 (MQ=255) ggTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGccc > 1:3521435/1‑150 (MQ=255) tGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGccccc > 2:6622743/1‑150 (MQ=255) ggCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTg > 2:5977844/1‑150 (MQ=255) gggggATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCTTTGCAGcccttcgcgg < 2:3446145/147‑8 (MQ=255) ggggATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAAtctc > 1:4963782/1‑150 (MQ=255) gATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAAc < 1:7303827/150‑1 (MQ=255) gATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAAc < 2:1012368/150‑1 (MQ=255) aTTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACg < 2:4037019/150‑1 (MQ=255) ttGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGc > 1:4416940/1‑150 (MQ=255) ggCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTg < 1:6853560/150‑1 (MQ=255) ggCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTg < 2:1580789/150‑1 (MQ=255) gCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTgg > 2:1296512/1‑150 (MQ=255) cGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGaa < 1:3586626/150‑1 (MQ=255) tggtgCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAacac < 2:4222247/150‑1 (MQ=255) tggtgCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAacac < 1:2821742/150‑1 (MQ=255) gtgCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACtt < 2:6370853/150‑1 (MQ=255) gggggAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTc > 2:4484421/1‑150 (MQ=255) gggAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTcag < 1:2836415/150‑1 (MQ=255) gAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTcagca < 2:4315643/150‑1 (MQ=255) gAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTcagca > 2:3791455/1‑150 (MQ=255) aCATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGa < 2:4958720/150‑1 (MQ=255) ttCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTa > 1:5793178/1‑150 (MQ=255) tCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTAt < 1:5755461/150‑1 (MQ=255) tCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTAt < 1:4582794/150‑1 (MQ=255) gATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATc < 1:4300599/150‑1 (MQ=255) cGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATcgaa < 2:3331279/150‑1 (MQ=255) aGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATcgaacg > 1:6697036/1‑150 (MQ=255) aGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATcgaacg > 1:1005423/1‑150 (MQ=255) tACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGaaa < 2:2480778/150‑1 (MQ=255) tACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGaaa < 1:6265762/150‑1 (MQ=255) ccTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcg > 2:4845142/1‑150 (MQ=255) ccTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGAGTAGGAGCGGGTTCACACTCGAAGGGCTGCAAAGCAGCCCCCTGATATCTCAACGCTGGAACACTTCACTCAGCAGATTATTCATAGATCTAAAcg < 2:5094108/150‑1 (MQ=38) cTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcgc > 2:2675247/1‑150 (MQ=255) cTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcgc > 2:3495082/1‑150 (MQ=255) cTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcgc > 1:2697992/1‑150 (MQ=255) tCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCCGATTATGCATCGACCGACAcgct > 2:6838207/1‑150 (MQ=255) cGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcgctc < 1:3272431/150‑1 (MQ=255) cGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAAcgctc < 2:823243/150‑1 (MQ=255) aTCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGctcgctcg > 1:6956456/1‑150 (MQ=255) tCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCgg < 1:1126111/150‑1 (MQ=255) ggggATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGaa < 1:413426/150‑1 (MQ=255) ggggATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATACATCGAACGAAACGCTCGCTCGGaa < 2:7211946/150‑1 (MQ=255) aTGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTgc < 2:546082/150‑1 (MQ=255) ggCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGcc < 1:6032416/150‑1 (MQ=255) acaGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGt > 2:2386464/1‑150 (MQ=255) caGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTc < 1:7094515/150‑1 (MQ=255) gTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCg < 2:7103967/144‑1 (MQ=255) gTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATa < 1:7173159/150‑1 (MQ=255) tCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATAc < 2:3823898/150‑1 (MQ=255) tCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATAc > 2:6924006/1‑150 (MQ=255) gcggTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGc < 1:894000/150‑1 (MQ=255) gcggTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGc < 1:6303555/150‑1 (MQ=255) cggTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCa < 2:5613495/150‑1 (MQ=255) gTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATc < 2:6169402/150‑1 (MQ=255) gcgcAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCgg < 1:2966776/133‑1 (MQ=255) gTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACTAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCa < 1:6532487/150‑1 (MQ=255) tCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCat > 2:2127943/1‑150 (MQ=255) cACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGt < 2:4437813/118‑1 (MQ=255) cACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGt > 1:4437813/1‑118 (MQ=255) aaacGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCACTCTCAACGCTGGAACACTTCACTCAGCAGATTAAGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCatat > 2:6490489/4‑150 (MQ=255) aCCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATAtt < 1:4226973/150‑1 (MQ=255) ccGACGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTg < 2:6177777/150‑1 (MQ=255) cgTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTc < 1:2322037/150‑1 (MQ=255) cgTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTc > 1:5948650/1‑150 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCgg < 1:3912915/150‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCgg < 2:959526/150‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCggg > 1:1692525/1‑150 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCCTATTGGCATTCGGGt > 1:2212042/4‑150 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGt > 1:1229227/4‑150 (MQ=255) ttcgCGGGTGAACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGt > 1:6466316/4‑150 (MQ=255) ggAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGt < 2:3263699/150‑1 (MQ=255) gAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTc < 1:1317674/150‑1 (MQ=255) gggTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTa > 2:7275447/1‑150 (MQ=255) gTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTaaa > 2:1744483/1‑150 (MQ=255) gTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTaaa > 1:5562107/1‑150 (MQ=255) gTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCCCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTaaa < 2:5893408/150‑1 (MQ=255) ttCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAAc > 1:6417031/1‑150 (MQ=255) ttCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAAc < 1:5294253/150‑1 (MQ=255) ttCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAAc < 2:5881387/150‑1 (MQ=255) ttCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAAc < 1:1958987/150‑1 (MQ=255) cACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGGACGAAACGCACGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCAGTAAACGa < 2:2259615/150‑1 (MQ=255) cACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGa < 2:5272897/150‑1 (MQ=255) ccGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAATGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTg > 2:409582/1‑150 (MQ=255) ccGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGt > 1:5157546/1‑137 (MQ=255) ccGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTg > 1:5630198/1‑150 (MQ=255) ccGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTg > 1:6632796/1‑150 (MQ=255) gcgAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGcc > 2:5776040/1‑149 (MQ=255) gAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCAcc > 1:1807151/1‑150 (MQ=255) agggggCTGCTTTGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTg < 1:5465655/120‑1 (MQ=255) agggggCTGCTTTGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCAcc > 1:3848445/4‑150 (MQ=255) agggggCTGCTTTGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCAcc > 1:4844648/4‑150 (MQ=255) gggCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACcgcg > 1:2416689/1‑150 (MQ=255) ggCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCgcgc > 2:2747184/1‑150 (MQ=255) tGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGcgccgc > 1:6971468/1‑150 (MQ=255) tGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGcgccgc > 1:4017438/1‑150 (MQ=255) | CCGGGCCAGGTGGGCTGCGGGGGATTGGCCGGTGGTGCCGGGGGAACATTCGAGGATCGAGTTACCTCGGTGATCGGGGATGGGCACAGGTCGGCGGTTGGGCGCAGTCCACCGTCGCGTAGGAGCGGGTTCACCCGCGAAGGGCTGCAAAGCAGCCCCCTGCAATCTCAACGCTGGAACACTTCACTCAGCAGATTATGCATCGAACGAAACGCTCGCTCGGAAGTGCGCCGGTCATACTGCATCTTGCCCGGCATATTGGCATTCGGGTCGGTAAACGAGTGCACCGCGCCGCCGT > NC_002947/4725698‑4725995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |