| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,857,398 | A→C | 8.5% | intergenic (‑75/+222) | recR ← / ← ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,857,398 | 0 | A | C | 8.5% | 443.1 / 5.0 | 144 | intergenic (‑75/+222) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| Reads supporting (aligned to +/- strand): ref base A (19/109); new base C (3/13); total (22/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GGCGGTTTTCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAA > NC_002947/4857249‑4857522 | ggCGGTTTTCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCaaa < 1:3436835/150‑1 (MQ=255)ggCGGTTTTCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCaaa < 2:4553007/150‑1 (MQ=255) gCGGTTTTCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAg > 1:1161752/1‑150 (MQ=255) ttCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCa < 2:482559/150‑1 (MQ=255) ttCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCa < 2:5426519/150‑1 (MQ=255) tCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCaa < 2:5678725/150‑1 (MQ=255) aCCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTC > 1:5957906‑M1/1‑150 (MQ=255) aCCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTC < 2:2633687‑M1/150‑1 (MQ=255) ccGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCT > 1:1607845‑M1/1‑150 (MQ=255) gACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGC < 1:3951376‑M1/150‑1 (MQ=255) gACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGC > 1:1694575‑M1/1‑150 (MQ=255) gACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGC < 2:3167997‑M1/150‑1 (MQ=255) acacCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCT < 1:1018129‑M1/150‑1 (MQ=255) ccTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTT < 1:1923919‑M1/150‑1 (MQ=255) tGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTT < 1:6918643‑M1/150‑1 (MQ=255) tGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTT < 2:5782046‑M1/150‑1 (MQ=255) tGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTT < 1:3792966‑M1/150‑1 (MQ=255) tGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTT > 2:3963833‑M1/1‑150 (MQ=255) ggCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTG < 1:5043231‑M1/150‑1 (MQ=255) ggCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTG < 1:2731591‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 1:3476596‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 2:7121025‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 2:1499278‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 2:4421659‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 2:6454218‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGT < 1:2316651‑M1/150‑1 (MQ=255) gCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTCTGT < 1:4880677‑M1/150‑1 (MQ=255) cAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTG < 2:627036‑M1/150‑1 (MQ=255) cAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTG < 1:3748797‑M1/150‑1 (MQ=255) aaGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGG < 2:230270‑M1/150‑1 (MQ=255) aaGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGG < 2:6325759‑M1/150‑1 (MQ=255) gATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGA < 1:1021061‑M1/150‑1 (MQ=255) gATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGA < 1:2030976‑M1/150‑1 (MQ=255) tGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGC < 1:3175016‑M1/150‑1 (MQ=255) cgcAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGG < 1:625172‑M1/150‑1 (MQ=255) cgcAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGG < 2:4943695‑M1/150‑1 (MQ=255) gcAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGC < 2:480855‑M1/150‑1 (MQ=255) gcAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGC > 2:5309084‑M1/1‑150 (MQ=255) ggCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTT < 1:5309084‑M1/150‑1 (MQ=255) ggCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTT < 1:7386291‑M1/150‑1 (MQ=255) ggCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTT < 1:7386194‑M1/150‑1 (MQ=255) ggCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTT < 2:5552767‑M1/150‑1 (MQ=255) ccGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGT < 2:3169546‑M1/150‑1 (MQ=255) cGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTG > 1:7157075‑M1/1‑150 (MQ=255) gTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGT < 1:661116‑M1/150‑1 (MQ=255) tCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTC < 1:3262999‑M1/150‑1 (MQ=255) gATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGC < 2:6998185‑M1/150‑1 (MQ=255) cAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 1:2237812‑M1/150‑1 (MQ=255) cAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 1:5988288‑M1/150‑1 (MQ=255) cAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 2:4702652‑M1/150‑1 (MQ=255) cAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 2:2005179‑M1/150‑1 (MQ=255) cAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 2:4702305‑M1/150‑1 (MQ=255) aGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAA < 1:5593949‑M1/150‑1 (MQ=255) gTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAG < 1:3130672‑M1/150‑1 (MQ=255) ttGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGG < 1:2189169‑M1/150‑1 (MQ=255) ttGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGG < 2:2138884‑M1/150‑1 (MQ=255) ggCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGc < 1:6221826/150‑1 (MQ=255) cGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTg < 2:173151/150‑1 (MQ=255) cGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTg < 1:4147544/150‑1 (MQ=255) ggATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGc < 2:4118362/150‑1 (MQ=255) gATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCg < 1:6523163/150‑1 (MQ=255) tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTCTACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:3798980/150‑1 (MQ=255) tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 2:1023636/150‑1 (MQ=255) tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:5224222/150‑1 (MQ=255) tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:3696431/150‑1 (MQ=255) cTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGcccc < 2:3570098/150‑1 (MQ=255) tGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCg > 1:6705432/1‑150 (MQ=255) aaGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAagc > 2:5081467/1‑141 (MQ=255) aGCTCTTGGGAAAGGCCTGACAATTCAATAAGTGGCGGTTTATACCCAGGGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCa < 2:6705432/150‑1 (MQ=255) aGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCTTCGCAGccctttcg < 2:5988285/150‑6 (MQ=255) gggAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA < 1:2226628‑M1/120‑1 (MQ=255) gggAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AA > 2:2226628‑M1/1‑120 (MQ=255) ggCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGctgcgaagcggccccgggatttcagcttcgca < 2:3111273‑M1/150‑33 (MQ=255) gCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTT > 1:5103230‑M1/1‑87 (MQ=255) gCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTT < 2:5103230‑M1/87‑1 (MQ=255) cttaaatttCAATCCGTGGGGGTTTATACCCTGGGGGGGGGGTGGCGTAAAATCACCTCGCCAAACGCCTGCATGGTCTGATTTTTTGTGGTAGGGGCCTTGTGTCGCT‑AACGGGCTGCGACGCCCCCCCGGCACTCTGTGCTGCGAAGc < 2:534124/143‑1 (MQ=255) cTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagca < 2:6154595‑M1/150‑36 (MQ=255) cTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCg < 1:1384485/120‑1 (MQ=255) cTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCg > 2:1384485/1‑120 (MQ=255) cAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacaga < 2:3607826‑M1/150‑40 (MQ=255) aaaTTCAATACGCGGCTGTTTAACCCCCGGGGGGGGGGTGGCGTCAAACCACCGCGCCCAACGCCTGCATGGTCTGCTTTTTGGTGGGAGCGGCCTGGTGGGGCG‑AACGGGCGGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGaa < 2:1694575/149‑1 (MQ=255) aaTTCATTAGGCGGGGTTTTATCCCCGGGGGGGGGGGTGGCTAAAAACCACCCCCCCAACCGCCTGCTTGTTGTGTTTTTTTGTGGGCGGGGCGTTGTGGGGCT‑ACTGGGGTGCGAAGCCCCCCCGGCACTCTGTGCTGCGAAGCTGaaa < 2:309543/150‑1 (MQ=255) cAATACGTGGGGTTTTATACCCCGGGGGGGGGTTGGCTAAAACTCCCCTCCCCCAACCCCTGCATGTTGTGCTTTTTTGTGGGTGCGGCCTTGGCTCGCT‑AACGGGCTGCTAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATccc < 2:6299392/150‑1 (MQ=255) agagGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AACGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGc < 2:6811992/150‑1 (MQ=255) agagGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAACTCCCGGGGc > 1:2790088/1‑150 (MQ=255) agGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGT > 1:5214479‑M1/1‑87 (MQ=255) ggCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggggctgc < 1:1375887‑M1/150‑53 (MQ=255) ttATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggggctgcttcgca < 2:2458098‑M1/150‑59 (MQ=255) ttATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggggctgcttcgca < 2:1572842‑M1/150‑59 (MQ=255) tatcCCCGGGGGGGGGGGTGGCGTCAACGCACCGCGCCCAACGCCGGCACGGTCTGCTTTTTTGTGGGCGCGGCGTTGGGGGGCG‑ACCGGGGTGCGACGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCgcgc < 2:5416718/150‑1 (MQ=255) atcccccGCGGGGGCGGTGGCGCCAAAACCCCCCGCCAAACCCCTGCAAGTTCTGCTTTTTTGGGGGTGGGGCCTTGTGCGGCG‑AACGGGCGGCCTAGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcc < 2:2941609/147‑1 (MQ=255) taCCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggggctgcttcgcagcc < 1:6746546‑M1/150‑62 (MQ=255) ggggggggggggGCGTCAAACCACCCCCCCCAAAGCCCGATCGGTGTGCTTTTTGGGGGGGGCGGCCGTGTGACGCG‑ACCGGGCTGCGACGCACCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTcg < 2:199909/148‑1 (MQ=255) gCGGGGGCGGTGGCTTCAAAGCCCCGCGCCAAACGCCTGAAAGGAGTGTTTTTTGGTGGGCGCGGCCTTGT‑TCCCGTAACGGGCTGCGACGACGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTcg < 2:6488833/150‑1 (MQ=255) ggggggGTGGCGCCAAACCACCTCGCCCAACGCCTGCACGGTCTGCTTTTTTTTGGGAGCGGCCTGGTGTCGCG‑AACGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcga > 2:1161752‑M2/1‑139 (MQ=255) ggggCGGTGGCGTCAAATCACCTCGCCCAACGCCTGCATGGTCTGCTTTTTTGTGGGAGGGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcga > 2:4218292‑M2/1‑139 (MQ=255) ggggCGGGGGCTTCAAAGCACCGCGCCCAACGCCTGCAAGGGCGGCTTTTTTGGGGGCGCGGCGTTGGGGCGCG‑ACGGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGa < 2:5957906/150‑1 (MQ=255) ggCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGgcgcgaagcggccccgggatttcagcttcgcagcacagagtgccggggctgcttcgcagccctttcgcgaca < 2:4800796‑M1/150‑73 (MQ=255) gggggCGTCAAAACCCCCCCCCCAACGCCTGAATGGTGTTTTTTTTTGTGGGTGCGGCCTTGTGTCGCC‑AAGGGGCTGCCAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACaa < 2:4011593/147‑1 (MQ=21) aaTCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTT > 2:3414201‑M1/1‑51 (MQ=255) | GGCGGTTTTCTGACCGACACCTGGCAAGATGCGCAGGCCGTCGATCAGTTGGCGGATGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAA > NC_002947/4857249‑4857522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |