| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,857,454 | A→C | 20.9% | intergenic (‑131/+166) | recR ← / ← ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,857,454 | 0 | A | C | 20.9% | 141.2 / 8.5 | 64 | intergenic (‑131/+166) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| Reads supporting (aligned to +/- strand): ref base A (33/16); new base C (3/12); total (36/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAGCGGCGGTT > NC_002947/4857305‑4857601 | tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTCTACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:3798980/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 2:2114566/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:3696431/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:3771050/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 2:1023636/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:5224222/150‑1 (MQ=255)tGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGaa < 1:5224163/150‑1 (MQ=255) agagGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAagc < 2:5553202/150‑1 (MQ=255) cTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGcccc < 2:3570098/150‑1 (MQ=255) tGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCg > 1:6705432/1‑150 (MQ=255) aaGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAagc < 1:5081467/141‑1 (MQ=255) aaGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAagc > 2:5081467/1‑141 (MQ=255) aaGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGccctttc < 1:6052976/150‑5 (MQ=255) aGCTCTTGGGAAAGGCCTGACAATTCAATAAGTGGCGGTTTATACCCAGGGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCa < 2:6705432/150‑1 (MQ=255) aGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCTTCGCAGccctttcg < 2:5988285/150‑6 (MQ=255) tCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCActc > 2:5392496/1‑150 (MQ=255) ccTGACAATACATTACGTGGGGTTTTATCCCCCGGGGGGGGGGTGGCGTAAAAACACCCCGCCCACCGCCGGCACGGTCTGCTTTTTTGGGGGCGGGGCCTTGTGTGGCG‑AATGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAg < 2:2254527/150‑1 (MQ=255) ccTCACAATAAATTAAGCGGCGTTTTATACCCCGGGGGGGGGGTGGCGTAAAACCCCCGCGCCCAAAGCCTGAATGGTCTGTTTTTTTGTGGGAGCGGCGTTGTGTCGCG‑AACGGGCGGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAg < 2:4750795/150‑1 (MQ=255) cttaaatttCAATCCGTGGGGGTTTATACCCTGGGGGGGGGGTGGCGTAAAATCACCTCGCCAAACGCCTGCATGGTCTGATTTTTTGTGGTAGGGGCCTTGTGTCGCT‑AACGGGCTGCGACGCCCCCCCGGCACTCTGTGCTGCGAAGc < 2:534124/143‑1 (MQ=255) aCAATCCAATTCGAGGCGGTTTCTCCCCCGGGGGGGGGGTGGCGTCAAAACACCGCGCCCAACGCCTCCACGGTCGGCTTTTTTGTGGGAGCGGCCTTGGGCCGCC‑ACCGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGa < 2:3031172/150‑1 (MQ=255) aaaTTCAATACGCGGCTGTTTAACCCCCGGGGGGGGGGTGGCGTCAAACCACCGCGCCCAACGCCTGCATGGTCTGCTTTTTGGTGGGAGCGGCCTGGTGGGGCG‑AACGGGCGGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGaa < 2:1694575/149‑1 (MQ=255) aaTTCATTAGGCGGGGTTTTATCCCCGGGGGGGGGGGTGGCTAAAAACCACCCCCCCAACCGCCTGCTTGTTGTGTTTTTTTGTGGGCGGGGCGTTGTGGGGCT‑ACTGGGGTGCGAAGCCCCCCCGGCACTCTGTGCTGCGAAGCTGaaa < 2:309543/150‑1 (MQ=255) cAATACGTGGGGTTTTATACCCCGGGGGGGGGTTGGCTAAAACTCCCCTCCCCCAACCCCTGCATGTTGTGCTTTTTTGTGGGTGCGGCCTTGGCTCGCT‑AACGGGCTGCTAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATccc < 2:6299392/150‑1 (MQ=255) aaactggCGTTTTAAACCCCGGGGGGGGGGTGGCCACAAAACACCCCCCAAAAACACTCAAAGCTCTTATTTTTTGTGGTAGCGCACTTTTTTCGCC‑AATGGGCTGCAAACAACCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCggg < 2:1368288/145‑1 (MQ=255) agagGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AACGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGc < 2:6811992/150‑1 (MQ=255) agagGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAACTCCCGGGGc > 1:2790088/1‑150 (MQ=255) tatcCCCGGGGGGGGGGGTGGCGTCAACGCACCGCGCCCAACGCCGGCACGGTCTGCTTTTTTGTGGGCGCGGCGTTGGGGGGCG‑ACCGGGGTGCGACGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCgcgc < 2:5416718/150‑1 (MQ=255) atcccccGCGGGGGCGGTGGCGCCAAAACCCCCCGCCAAACCCCTGCAAGTTCTGCTTTTTTGGGGGTGGGGCCTTGTGCGGCG‑AACGGGCGGCCTAGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcc < 2:2941609/147‑1 (MQ=255) agaCCCCGGGGGGGGGGGGGCGTCAAACCACCCCCCCCAACGCCGCCCTGGTCGGGTTTTTGGGGGGTGCGGCCTTGTGTCGCG‑AAGGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGcc < 2:4044398/148‑1 (MQ=19) ggggggggggggGCGTCAAACCACCCCCCCCAAAGCCCGATCGGTGTGCTTTTTGGGGGGGGCGGCCGTGTGACGCG‑ACCGGGCTGCGACGCACCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTcg < 2:199909/148‑1 (MQ=255) gCGGGGGCGGTGGCTTCAAAGCCCCGCGCCAAACGCCTGAAAGGAGTGTTTTTTGGTGGGCGCGGCCTTGT‑TCCCGTAACGGGCTGCGACGACGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTcg < 2:6488833/150‑1 (MQ=255) ggggggggTGGCGTAAACCCACCGCGCCCAACGCCGGCCGGGTGTGC‑TTTTTGGGGGAGCGGCCTTGTGTCGCT‑AACGGGCGGCCACGCCGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGa < 2:6278732/150‑1 (MQ=255) ggggggGTGGCGCCAAACCACCTCGCCCAACGCCTGCACGGTCTGCTTTTTTTTGGGAGCGGCCTGGTGTCGCG‑AACGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcga > 2:1161752‑M2/1‑139 (MQ=255) ggggCGGTGGGGACAAATCACCTCGCCCAACGCCTCCATTGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcga > 2:4218339‑M2/1‑139 (MQ=255) ggggCGGTGGCGTCAAATCACCTCGCCCAACGCCTGCATGGTCTGCTTTTTTGTGGGAGGGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcga > 2:4218292‑M2/1‑139 (MQ=255) ggggCGGGGGCTTCAAAGCACCGCGCCCAACGCCTGCAAGGGCGGCTTTTTTGGGGGCGCGGCGTTGGGGCGCG‑ACGGGGCTGCGACGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGa < 2:5957906/150‑1 (MQ=255) gggggCGTCAAAACCCCCCCCCCAACGCCTGAATGGTGTTTTTTTTTGTGGGTGCGGCCTTGTGTCGCC‑AAGGGGCTGCCAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACaa < 2:4011593/147‑1 (MQ=21) gCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAc > 2:4541672/1‑150 (MQ=255) ccTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAcc > 2:5710648/1‑150 (MQ=255) ttGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGc > 1:3865354/1‑150 (MQ=255) tgtCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcc < 2:4800796‑M2/150‑79 (MQ=255) tgtCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCAc > 2:2471043/1‑150 (MQ=255) gtCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACt > 1:6213179/1‑150 (MQ=255) tCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCAcgg > 2:5558060/1‑148 (MQ=255) tCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtg > 1:702088/1‑150 (MQ=255) tCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtg > 1:783684/1‑150 (MQ=255) gcg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgtt > 2:4384402/1‑150 (MQ=255) cg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttg > 1:1089578/1‑150 (MQ=255) cg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttg > 1:4826858/1‑150 (MQ=255) cg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttg > 1:5940800/1‑150 (MQ=255) cg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttg > 1:5940958/1‑150 (MQ=255) cg‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttg > 1:6467298/1‑150 (MQ=255) g‑AAAGGGCTGTGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttgt > 1:950831/1‑150 (MQ=255) g‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttgt > 2:6690673/1‑150 (MQ=255) g‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACtgttgt > 1:4487314/1‑150 (MQ=255) ccggggCTGCTTCGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTGCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTc > 2:4538635/4‑150 (MQ=38) aaGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGGTGTcc > 2:4008475/1‑149 (MQ=255) ggggCTGCTTCGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAg > 2:5642135/2‑150 (MQ=255) gggCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggt < 1:2940962‑M2/150‑89 (MQ=255) ggatGCGAAGCAGCACCGGCACTCTGTGCAGCGAAGCTGAACTCCCGGGGCCGCTTCGCGCACCTTTCGCGACCCAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAAACGCCACGGTTGGCAccg > 2:6725635/4‑150 (MQ=37) ggCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggta < 1:6746546‑M2/150‑90 (MQ=255) ggCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggta < 2:4599114‑M2/150‑90 (MQ=255) cTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggc > 1:5294271/1‑150 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataa < 2:1572842‑M2/150‑93 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCccctttcgcgacacaaggccgctcccacaaaaaagcagaccttgcaggctttgggcgaggtgatttgacgccaccgcccccgctgggtataa < 2:2458098‑M2/150‑93 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggcg > 2:1664759/1‑150 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggcg > 2:1910325/1‑150 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggcg > 2:1910476/1‑150 (MQ=255) tGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggcg > 2:5885367/1‑150 (MQ=255) gCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggc > 1:114724/1‑148 (MQ=255) gCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAgcggc < 2:114724/148‑1 (MQ=255) cGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAGCGGCGGt > 2:3515154/1‑150 (MQ=255) gAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAGcggcgggt > 2:6992053/1‑148 (MQ=255) gAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACGGGTGTCAGCGGCGGtt > 2:4709080/1‑150 (MQ=255) | TGAGAGGGCTGAAGCTCATGGGAAAGGCCTGACAATTCAATAAGAGGCGGTTTATACCCAGCGGGGGCGGTGGCGTCAAATCACCTCGCCCAAAGCCTGCAAGGTCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCG‑AAAGGGCTGCGAAGCAGCCCCGGCACTCTGTGCTGCGAAGCTGAAATCCCGGGGCCGCTTCGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAAAAAAGCAGACCGCAACTGGGTTGAAATCTCCGCAAAAAAAACCGCCACTGTTGTCAGCGGCGGTT > NC_002947/4857305‑4857601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |