| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,894,579 | T→G | 9.5% | intergenic (+31/‑122) | hyi → / → glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,894,579 | 0 | T | G | 9.5% | 500.4 / 10.5 | 175 | intergenic (+31/‑122) | hyi/glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase |
| Reads supporting (aligned to +/- strand): ref base T (68/87); new base G (15/5); total (83/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 176 total aligned reads displayed.
GCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCG > NC_002947/4894430‑4894728 | atgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCt > 2:5049106‑M1/134‑150 (MQ=255) gaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCg > 2:6825467‑M1/132‑150 (MQ=255) caggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGccc > 2:3815196‑M1/129‑150 (MQ=255) tGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcg < 2:1638755/150‑1 (MQ=255) aggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGGGCGCCcg < 1:6855751‑M1/23‑1 (MQ=255) aggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcg > 1:7444140‑M1/128‑150 (MQ=255) ggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcgc > 1:1459289‑M1/127‑150 (MQ=255) gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc > 2:2296069/1‑150 (MQ=255) gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc < 2:3654027/150‑1 (MQ=255) gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc < 1:2741772/150‑1 (MQ=255) gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc > 2:5096826/1‑150 (MQ=255) ctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCGAGcccgctc > 2:6351856‑M1/125‑148 (MQ=255) tgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑aa > 1:4205288‑M1/124‑150 (MQ=255) cGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgcgca > 1:4731052/1‑148 (MQ=255) gtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCGagcccgctccc > 1:2254242‑M1/123‑146 (MQ=255) gAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑Aac > 2:3155718/1‑150 (MQ=255) gAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑Aac > 1:6166765/1‑150 (MQ=255) acacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑Aacac < 2:5870771/150‑1 (MQ=255) cacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACAcc < 1:7330693/150‑1 (MQ=255) cacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACAcc < 1:5058921/150‑1 (MQ=255) cctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCg > 1:5803656‑M1/119‑150 (MQ=255) acCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCg < 1:6774985/150‑1 (MQ=255) cTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACACGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGc > 2:4277000/1‑150 (MQ=255) tGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGACCAACTCGGGACCCTGTGGGAGCGGGCGCCCCCGCG‑AACACCGGcc > 1:1470638/1‑149 (MQ=255) gACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCaaa < 2:4960866/150‑1 (MQ=255) cGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCCAAG‑cc > 2:3044196/1‑150 (MQ=255) cGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑cc < 1:1629085/150‑1 (MQ=255) gCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCg > 2:3058098/1‑150 (MQ=255) gCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCg < 2:7323402/150‑1 (MQ=255) cATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGTGCGGGGTCGGCCGCGTAACACGGGGAATG‑cgg > 1:1231146/1‑148 (MQ=255) caggttctgagccatgggcttgcccatgaagccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGt > 1:6263438‑M1/108‑150 (MQ=255) aTTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGt < 1:2963997/150‑1 (MQ=255) ttGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACTGGCAAAG‑CCGGTg < 1:4709105/150‑1 (MQ=255) gCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCTTTG‑CCGGTgttc < 1:5968975/150‑4 (MQ=255) gCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCTTTG‑CCGGTgttc < 1:291362/150‑4 (MQ=255) cTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCAt < 2:4530292/150‑1 (MQ=255) tACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATc < 1:5999321/150‑1 (MQ=255) aGGGCGGGGTGGGCGCGGCGTACCAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCGGAAAACCCACAACCCACCCGGAGGAACACCCCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCTGCAAAT‑CCTGTGCCATCCAcc < 2:167816/150‑1 (MQ=37) ggCTGGGTGGGCGCGGAGTACACGCCGCGGACCACCACCGCAGCGGGCCGGGGCGGGCTGAAAACCCACACCGCACGCGGAGGAACAACTCGGGACCCTGGGGGAGCGGGCTCGCCCGCG‑AACACGGGCTAAG‑CCGGTGGCATCCACCGa < 2:3039539/150‑1 (MQ=255) catgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcgcg > 1:7248237‑M1/96‑120 (MQ=255) catgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCcgcg < 2:7248237‑M1/25‑1 (MQ=255) catgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGa > 1:5334043‑M1/96‑150 (MQ=255) cTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGt < 1:6583230/150‑1 (MQ=255) tgggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGtt < 1:1205898/150‑1 (MQ=255) tgggtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCGCGCCCGCG‑CACACCCGCAAAG‑CCCGTGCCCTCCACCCAGtt > 1:51101/1‑150 (MQ=38) gtgggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTc < 1:7020509/150‑1 (MQ=255) ggCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGc < 2:6513776/150‑1 (MQ=255) ccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCtt < 2:243253‑M1/66‑1 (MQ=255) cgGAGTACAAGCCGCTGACCACCACCGACGCGGGCCTGGGCTGGCTGAAATCCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCGCGCCCGCG‑TGGACCGGCACAG‑CCGGTGGCCTGCACCGGGTTGTGTGGTTcg > 1:3865227/1‑150 (MQ=255) cgGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTcg < 2:4023249/150‑1 (MQ=255) cgGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTcg > 2:2829806/1‑150 (MQ=255) ggAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTcgc > 2:6184328/1‑150 (MQ=255) atgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg > 1:243253‑M1/80‑150 (MQ=255) aGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg < 1:1658961/150‑1 (MQ=255) aGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg < 1:5512605/150‑1 (MQ=255) tgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCggg > 2:3229740‑M1/79‑150 (MQ=255) tgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCggg > 2:3229699‑M1/79‑150 (MQ=255) tACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGc > 2:5482185/1‑150 (MQ=255) cggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGa > 2:2953162‑M1/76‑150 (MQ=255) cggtgccgatgaaaccgattttagccatgagaaagtacctctttgtaattgtgatatctcacgcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGa > 2:5117681‑M1/76‑150 (MQ=255) aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGGTGGGCCGCG‑GACACCGGCAAAA‑ACGGTGCCATCCACCGGGTTGTGTGGTTTGGGGGCggg > 1:707683/1‑148 (MQ=255) aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGGGCGCCCGCG‑CCCACCGGCAAAG‑CCCGTGCCAGCCCCCCAGTTGTCTGGGTCGCggggggg > 1:4543409/1‑146 (MQ=255) aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCCAAG‑CCGGTGCCATCCCCCGAGTTGTCGGCTTCGCGGGCGAg > 2:6955101/1‑150 (MQ=255) aGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGc < 1:6184328/150‑1 (MQ=255) aGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAAGCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGc < 1:2904463/150‑1 (MQ=255) gCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGcc > 2:2410087/1‑150 (MQ=255) gCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGcc < 1:3776533/150‑1 (MQ=255) tGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTc < 2:1727223/150‑1 (MQ=255) accaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑GACACCCGCACAG‑CCGGTGCCCTCCACCGAGTTGTCTGCTTCGCGGGCGCGCCCGCTCCcaca > 1:7158988/1‑150 (MQ=38) ccGAAGCGGGCCTGGGCTGGCTGAAAACCCCCACCGCACTCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgggg < 2:1976392/150‑1 (MQ=255) ccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgggg < 2:2197489/150‑1 (MQ=255) cGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGGGCGCCCGCG‑CACAACCGCCAAG‑CCCGTGCCCACCACCCCGTTGTGTTCGTAGCGGGCGCGCCCGCACCCACCggggg > 1:2091414/1‑150 (MQ=255) cGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGGGCGCCCCCC‑GACCCCGGCCCAG‑CCGGTGCCCCCCACCGAGGTGGGTGCGTGGGCGGCGCGCCCCCTCCCACAcgggg > 1:3308270/1‑150 (MQ=255) gCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGGTCGCCCGCG‑CACACCGGCAAAG‑CCCGTGCCCTCCCCCGAGTTGGATGCTTCGCGGGCGGGCCCCCTCCCACCCGGGGCCaaacca > 1:4624343/1‑147 (MQ=255) ggggCTGGCAGAAAACCCACAACGCAATCTGAGGAACACCGCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgc < 2:5524546/149‑1 (MQ=255) gggCTGGCTGACAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgct < 2:1532117/150‑1 (MQ=255) ggctggctGAAAACCCACAACGCAATCTGAGGAACAACCCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGGGCCCGCTCCCACAGGGGGCCAAAgcttgctt < 2:2067862/150‑1 (MQ=255) ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga < 2:5748781/150‑1 (MQ=255) gctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCCCCCCCG‑CACACCGGCCCAGCCCGGGGCCA‑CCCCCCAGGTGTGTGCGTAGCGGGGGCGCCCCCTCCCCCCGGGGGCCAAAGCGTGCTTGGGat > 1:260290/1‑150 (MQ=255) aaaaCCCACACCGCAATCTGCGGAACACCTCGGGACCCTGTGGGTGCGGGCTCGCCCGCG‑AACACGGGCAAAG‑CGGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATca < 1:3044196/150‑1 (MQ=255) aaaCCCACACCGCAATCTGAGGAACACCTCGGGACCCTGTGGGCGGGGGCTCGCCCGCG‑AACACCGGCAACG‑CCGGGGCCACCCCCGGAGTTGTCTGCTGCGCGGGCGCGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATcac < 1:811799/150‑1 (MQ=37) ttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg < 1:441114‑M1/71‑1 (MQ=255) ttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg > 2:441114‑M1/34‑104 (MQ=255) cacaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTa > 2:4817682/1‑150 (MQ=255) aaCGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACCCCGGCCAAG‑CCGGTGCCCTCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAAGTAcca > 2:922677/1‑148 (MQ=255) acccAATCTGACGAACAACTCGTGTCCCTGTGGGAGCGTGCTAGACATAG‑AACACAGGCAAAC‑CGGGTTCCATCAACCGAGTTTTCTGATTCGCTGGCGAGCCCTATCCCACAGGGGTAAATAGCTTGCTTGAGATATCACAATTACaaa < 2:1076700/147‑1 (MQ=255) tgatagctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTcgcg < 2:6711288‑M1/70‑1 (MQ=255) tgataactcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTcgcg > 1:6711288‑M1/25‑94 (MQ=255) gCAATCTGTGGAACACCGCGGGACCGTGTGGGTGGGGGCGCGCCCGCG‑AACACCGGCAACG‑CGGGTGCCATCCACCGTGTTGTGTGGTTCGGGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAaga < 1:2296069/150‑1 (MQ=25) gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCCTCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCGTGCGTGAGATATCACAATTACAAAGAGGTAATTtct > 2:4076945/1‑150 (MQ=255) gAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGTGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATc < 1:2384492/127‑1 (MQ=255) acaccTCGGGACCGTGTGGGAGCGGGCGCGCCCGCG‑AACACCGGCAACG‑CCGGTGCCATCCACCGAGTTGTCTGGTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCa < 1:5234223/150‑1 (MQ=37) acTCGGGCCCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATgg < 2:470788/150‑1 (MQ=255) TGTGGGAGCGGGCTCGCCCGCG‑AACAGCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGGGAGCCCGCTACCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGt < 2:2371649‑M1/150‑1 (MQ=255) TGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCGTGAGATATCACAATTACCAAGAGGTAATTTATCATGGCTAAAATCGGt < 2:6855751‑M1/150‑1 (MQ=255) gGGGCGCGGGCGCGCCCGCG‑AACACCGGCAACG‑CGGGGGCCATCCCCCGTGTTGTCTGCTGCGCGGGCGCGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGttt > 1:4352115‑M1/2‑150 (MQ=255) TGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGttt > 2:6644707‑M1/1‑150 (MQ=255) GCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCg > 1:3058098‑M1/1‑150 (MQ=255) GGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGc < 1:2819454‑M1/150‑1 (MQ=255) TCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCg < 1:6937483‑M1/150‑1 (MQ=255) | GCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCG‑AACACCGGCAAAG‑CCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCTAAAATCGGTTTCATCGGCACCG > NC_002947/4894430‑4894728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |