| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,901,393 | T→C | 9.6% | intergenic (+32/‑176) | PP_4304 → / → sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,901,393 | 0 | T | C | 9.6% | 582.5 / 35.9 | 201 | intergenic (+32/‑176) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (77/102); new base C (11/8); total (90/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.07e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
CAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCA > NC_002947/4901244‑4901542 | cAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCTCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAAt < 2:1158337/150‑1 (MQ=255) aaTGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATc < 1:2862110/150‑1 (MQ=255) aaTGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATc < 2:2084714/150‑1 (MQ=255) ccATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCGTCGCGGGTAAATCC‑GCt > 1:7301400/1‑150 (MQ=255) cATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTc < 1:320697/150‑1 (MQ=255) cATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTc < 1:6081440/150‑1 (MQ=255) gCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTa < 2:3360753/150‑1 (MQ=255) tGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAg > 2:1623208/1‑150 (MQ=255) gAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGgcgc < 2:5287169/150‑1 (MQ=255) gAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGgcgc < 2:6158966/150‑1 (MQ=255) cagcTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGa < 2:295696/150‑1 (MQ=255) cagcaTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTgc < 2:1624909/150‑1 (MQ=255) agcaTGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTgcg < 1:5783958/150‑1 (MQ=255) tGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGCGCACGGTccgc < 1:6171976/150‑3 (MQ=255) tgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCg > 1:6677791‑M1/93‑150 (MQ=255) tgaagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCg > 1:6958419‑M1/93‑150 (MQ=255) cGACCTGCCACCAGAAGACCCACGAGCAGGGGGCTGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 2:1419171/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGGGGACCGCGCACGGTccgcgcct < 1:2403085/150‑7 (MQ=38) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGGGGACCGCGCACGGTccgcgcct < 2:5022838/150‑7 (MQ=38) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 1:7196684/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 2:1889272/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 1:2778523/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 1:1518460/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa < 2:2343095/150‑1 (MQ=255) cGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCGCGTCGCGGGGGAATCC‑GCGCCGCCCCGCGCGGGCCCGGCGCGGGcc‑‑‑ccccgg > 1:3965269/1‑147 (MQ=255) aagggtgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAACCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTa > 2:4784842‑M1/91‑150 (MQ=255) gACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAg < 1:6388555/150‑1 (MQ=255) gACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAg < 1:6248274/150‑1 (MQ=255) aCCTGCCACAAGAAGACCCACGAGAAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATc < 1:4165155/111‑1 (MQ=255) tgttggggcagattgccagcgactctaacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGc > 2:4741909‑M1/86‑150 (MQ=255) tgttggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGc > 1:1136661‑M1/86‑150 (MQ=255) ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTTAATAC‑GCGCCTAAAGGCGCGGACCGGGGGCGGTCC‑‑‑CCCGTAGGAGCgg > 1:5420674/1‑150 (MQ=255) ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGa < 2:5840855/146‑1 (MQ=255) ccACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgg < 1:5087532/150‑1 (MQ=255) tggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg < 2:4350947‑M1/68‑1 (MQ=255) cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCggg < 1:4999977/150‑1 (MQ=255) cacaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCgga < 2:261217/150‑2 (MQ=255) ggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGt > 1:21667‑M1/82‑150 (MQ=255) ggggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGt > 2:3576001‑M1/82‑150 (MQ=255) acaAGAAGACCCCCGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACCGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGt > 2:3043144‑M2/1‑149 (MQ=255) acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGt > 1:716055‑M2/1‑149 (MQ=255) acaAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCCCGTAGCCGGTAAATCC‑GCACCGACACGCGCGGCCCCGGGGCGGTCC‑‑‑CCCCGAGGAGCgggg > 1:746982/1‑149 (MQ=255) gggcagattgccagcgacgataacgggtgggtttatacgggttaaagaacaaaaattgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGagcggttt > 1:6883933‑M1/81‑147 (MQ=255) ggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGttt > 2:2856017‑M1/80‑150 (MQ=255) ggcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGttt > 1:4656456‑M1/80‑150 (MQ=255) gcagattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTa > 2:2072086‑M1/79‑150 (MQ=255) gattgccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGGGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTAccc > 2:6515994‑M1/76‑150 (MQ=255) gagtgccagcgactagaacgggggggtttagacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTAccc > 2:6034855‑M1/76‑150 (MQ=255) gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccg > 2:6470108‑M2/1‑142 (MQ=255) gaCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccg > 1:6023407‑M2/1‑142 (MQ=255) ttgccagctactataacgggtggttttataagggttaaagaacaataaatgctttggttatgcttctgcctgtGCCGGCCTCTTCTCGTTTAAATCC‑GCTCCTACAGGCGCGGACCGTTCGCTGTCC‑‑‑CCCGTAGGAGCGGGTTTACCcgc > 1:560330‑M1/74‑150 (MQ=255) aCCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgc > 2:6374643‑M2/1‑141 (MQ=255) ccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGTGGGTTTACCCGCGaa > 1:4627301‑M1/71‑150 (MQ=255) ccagcgactataacgggtgggtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGaa > 2:605512‑M1/71‑150 (MQ=255) ccagcgactataacgggtgggtttagacgggttaaagaacaaaaaatgcttgggttatgcttctgcctgcGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACCGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGaa > 2:5168595‑M1/71‑150 (MQ=255) cACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaa > 2:2800850‑M2/1‑138 (MQ=255) cACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaa > 2:2756432‑M2/1‑138 (MQ=255) cgcgactataccgggtggggttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTCCAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTTGGAGCGGGTTTACCCGCGAaga > 1:7176389‑M1/69‑150 (MQ=255) cGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAtttacccgcgaaga > 1:2342356‑M2/1‑136 (MQ=255) gAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAtttacccgcgaagag > 2:4929532‑M2/1‑135 (MQ=255) aGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaagaggccg > 2:1082784‑M2/1‑131 (MQ=255) gcggcgTTCTGTTCTCGCTGTGGGATTGGGTTGTTTCCCAACGCGTGATCGCGCCTGCGCGGGCCTCTTCGCGGTTAAATCC‑GCTCCTACAGGCGCGGCCCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca < 2:7012349/150‑1 (MQ=38) ggcgTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAgg > 2:5437963/1‑150 (MQ=255) gtttatacgggttaaagaacaaaaaatgctttggttatgcttctgcctgtGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGaa > 1:5319907‑M1/51‑130 (MQ=255) ctgttcgCGCGGTGGGAAGGGGTTGTTTCCCAACGCGTGATCGCGCCGGCGCCGGCCTCTGCGCGGGTAACTCC‑GCGCCTCCCGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGCGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCactat < 2:3965269/150‑5 (MQ=37) cTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAgg < 1:2672038/103‑1 (MQ=255) tgtgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAtttacccgcgaagag > 2:5528561‑M2/1‑111 (MQ=255) tgtgGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGGGGACCGCGCACGGTCCGCGCCTGTAGGAGCGGAtttacccccgaagag < 1:5528561‑M2/126‑16 (MQ=255) gggTTGTTCCCCAACGCGTGATTGCGCCTGCGCCGGCCTCTTCGCGGTTAAATCC‑GCTCCTACAGGGGCGGACCGTGCGGGGTCC‑‑‑CCCGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCAtttttt < 1:3036090/150‑1 (MQ=38) caacccattCCCACAGCGTGATAGCGCCTGCGCCGGCCTCATCGCGGGTAAAAAC‑CCACCAACAGGCGCGGACCCTGCGCGGTCC‑‑‑CCCCTAGGAGCCGGTTTAACCCCCAAGAGGCCCGCACACGCAGAAGCAAAAACAAAACAattttt > 1:7266087/8‑150 (MQ=255) ggTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTg < 2:4827378/150‑1 (MQ=255) ttCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCGTCGCGGGTAAATCC‑GCTCCGACAGGCGCGGACCGTGCGCGGGCC‑‑‑CCCGGAGGGGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCGTAACCAAAGCATTTTTTGTTCttt > 1:6739018/1‑150 (MQ=39) ccAATGGGTGATCGCGCCGGCGCCGGCCTCTTGGGGGGTAACTCC‑GCTCCCACCGGCGCGGACCGGGCGCGGCCC‑‑‑CCCGTCGGTGCGGTTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAAc < 1:4802619/150‑1 (MQ=255) ccgCGAGATAGCGCCTGCGCCGGCCTCTTCGCGGTTAAATCC‑GCTCCTCCAGGGGCGGACCGGGCGCGGACC‑‑‑CCGGTTGGTGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCg < 1:3691563/148‑1 (MQ=38) gCGTGATAGCGCCTGCGCCGGCCTCGTCGCGGGTAAATCC‑GCACCTACAGGCGCGGACCGTGCGCGGGCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAAACCGtg > 2:5680763/1‑149 (MQ=255) cTGGGCCGGCCTC‑TGGGGGTTTAATCCGGCTCCAACGGGCGGGCACGGTGGGGGGGCC‑‑‑CCCGTTGTTGGGGTTTAACCCGCTAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCg < 1:1931559/150‑1 (MQ=255) CGGCCTCTTCGCGGGTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAg < 2:4859445‑M1/150‑1 (MQ=255) GGCCTCTTCGCGGGTAAACCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTcc‑‑‑ccc < 1:4694978‑M1/54‑1 (MQ=255) ctctTGGGGGGTAACCCC‑GCCCCTCCCGGCGCGGCCGGGGCGGGGTCC‑‑‑CCCGTTGGGGGGGGTTTACCCGCGATGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGc < 1:1425109/150‑1 (MQ=255) TCTTCGCGGGTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCt < 2:5228260‑M1/150‑1 (MQ=255) TCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGc < 1:226756‑M1/150‑1 (MQ=255) gggTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtggggct < 2:4158487‑M2/150‑97 (MQ=255) GGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGGAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTCTAAACCCACCCGTTATAGTCGCTGGCAATc < 2:2124533‑M1/150‑1 (MQ=255) GGGTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATc < 2:1454423‑M1/150‑1 (MQ=255) GGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGACCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCt < 1:4313275‑M1/150‑1 (MQ=255) GTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTg < 2:5376607‑M1/150‑1 (MQ=255) GTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTg < 2:4198775‑M1/150‑1 (MQ=255) GTAAACCC‑GCTCCTACGGG‑‑‑GGACCGCGCACGGTCCGCGCCTGTAGGAGCGGATTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTg < 1:4350947‑M1/150‑1 (MQ=255) AAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGcc < 1:820177‑M1/150‑1 (MQ=255) AAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGcc < 1:1247264‑M1/150‑1 (MQ=255) aTCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaagaggccggcacaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttgt < 2:4029423‑M2/150‑103 (MQ=255) aTCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGtttacccgcgaagaggccggcacaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttgt < 2:4029345‑M2/150‑103 (MQ=255) aTCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGAtttacccgcgaagaggccggcgcaggcgctatcacgctttgggaaacaacccattcccacagcgagaacagaacgccgccccctgctcgtgggtcttcttgt < 1:3002604‑M2/150‑103 (MQ=255) ATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGcccc < 2:7105224‑M1/150‑1 (MQ=255) ATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGcccc < 2:4682320‑M1/150‑1 (MQ=255) tCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCa > 2:2233286/1‑150 (MQ=255) tCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCa > 1:7238308/1‑150 (MQ=255) tCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCa > 1:1585959/1‑150 (MQ=255) tCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCa > 1:1393389/1‑150 (MQ=255) tCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGATGGCAATCTGCCCCa > 1:1237156/1‑150 (MQ=255) | CAATGCCATGCGTGGGGAGCAGCTGCAGCATGATTGCCCGACCTGCCACAAGAAGACCCACGAGCAGGGGGCGGCGTTCTGTTCTCGCTGTGGGAATGGGTTGTTTCCCAAAGCGTGATAGCGCCTGCGCCGGCCTCTTCGCGGGTAAATCC‑GCTCCTACAGGCGCGGACCGTGCGCGGTCC‑‑‑CCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAGAAGCATAACCAAAGCATTTTTTGTTCTTTAACCCGTATAAACCCACCCGTTATAGTCGCTGGCAATCTGCCCCA > NC_002947/4901244‑4901542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |