Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 356,673 G→C 5.3% V5V (GTG→GTC tdcG‑I → L‑serine dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947356,6730GC 5.3% 1264.8 / 39.9 368V5V (GTG→GTCtdcG‑IL‑serine dehydratase
Reads supporting (aligned to +/- strand):  ref base G (171/177);  new base C (2/18);  total (173/195)
Fisher's exact test for biased strand distribution p-value = 7.64e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 380 total aligned reads displayed.

TCGGTTGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCTGTC  >  NC_002947/356524‑356822
                                                                                                                                                     |                                                                                                                                                     
  ggTTGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGtt                                                                                                                                                     >  2:6903562/1‑150 (MQ=255)
   gTTGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCTTTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGGCCTGCGCTTGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTc                                                                                                                                                    <  1:5933677/150‑1 (MQ=255)
   gTTGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATCGCCATCAGCGTGTTc                                                                                                                                                    <  2:3136325/150‑1 (MQ=255)
     tGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGa                                                                                                                                                  <  2:7184624/150‑1 (MQ=255)
      gCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGAc                                                                                                                                                 <  1:4318128/150‑1 (MQ=255)
      gCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGAc                                                                                                                                                 <  2:6187899/150‑1 (MQ=255)
        aGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCt                                                                                                                                               >  1:2968235/1‑150 (MQ=255)
         gACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTg                                                                                                                                              >  2:3840725/1‑150 (MQ=255)
            ggCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTc                                                                                                                                           >  2:3694340/1‑150 (MQ=255)
              cGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCaa                                                                                                                                         <  1:3027457/150‑1 (MQ=255)
              cGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCaa                                                                                                                                         <  1:3204908/150‑1 (MQ=255)
                    gggCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCgg                                                                                                                                   >  1:981074/1‑150 (MQ=255)
                     ggCGGTAAAAGCCCGATGCTGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGgt                                                                                                                                  <  2:5994244/150‑1 (MQ=255)
                     ggCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGgt                                                                                                                                  <  1:6571052/150‑1 (MQ=255)
                        ggTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTc                                                                                                                               >  2:2213053/1‑150 (MQ=255)
                         gTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCg                                                                                                                              <  2:3508271/150‑1 (MQ=255)
                           aaaaGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCggg                                                                                                                            <  2:2177519/150‑1 (MQ=255)
                           aaaaGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCggg                                                                                                                            <  2:3615574/150‑1 (MQ=255)
                           aaaaGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCggg                                                                                                                            <  1:3903067/150‑1 (MQ=255)
                                cccGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTc                                                                                                                       >  1:6238628/1‑150 (MQ=255)
                                   gatgatGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAg                                                                                                                    >  2:7062582/1‑150 (MQ=255)
                                    atgatgCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGc                                                                                                                   >  2:7366357/1‑150 (MQ=255)
                                       atgCTGGCATTCTAGGCGGCCCGCTGTTTGAGCATAGCAGCTAACCCGCGCTGCGCATGGCTCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGAACTGTTCAAGATCGGTGTCGGGCCCTCCAGCTcc                                                                                                                <  1:1827696/150‑1 (MQ=255)
                                        tgCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTccc                                                                                                               >  2:6744975/1‑150 (MQ=255)
                                         ccgcgaatgcggaggtatagccaccatcgcattcgcgggtaaacccgctcctacagggctcaatgtccacccaacaacctggcaggaggtccacatgtcactgAGCGTCTTCGACCTGTTCAAGAGCGGCAGCGGCCCCTCCAGCTCCca                                                                                                              <  2:6320972‑M1/47‑1 (MQ=255)
                                         ccgcgaatgcggaggtatagccaccatcgcattcgcgggtaaacccgcgcctacagggctcaatgtccacccaacaacctggcaggaggtccacatgtcactgAGCGTCTTCGACCTGTTCAAGATCGGCATCGGCCCCTCCAGCTCCca                                                                                                              <  1:5444005‑M1/47‑1 (MQ=255)
                                           tGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCcaca                                                                                                            >  2:1020296/1‑150 (MQ=255)
                                           gcgaatgcggaggtatagccaccatcgcattcgcgggtaaacccgcgcctacagggctcaatgtccacccaacaacctggcaggaggtccacatgtcactgAGCGTCTTCGACCTGTTCAAGATCGGCATCGGCCCCTCCAGCTCCcaca                                                                                                            <  2:2676330‑M1/49‑1 (MQ=255)
                                           gcgaatgcggaggtatagccaccatcgcattcgcgggtaaacccgcgcctacagggctcaatgtccacccaacaacctggcaggaggtccacatgtcactgAGCGTCTTCGACCTGTTCAAGATCGGCATCGGCCCCTCCAGCTCCcaca                                                                                                            <  2:814285‑M1/49‑1 (MQ=255)
                                             gCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACAcc                                                                                                          >  1:6771730/1‑150 (MQ=255)
                                              cATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCg                                                                                                         >  2:2793141/1‑150 (MQ=255)
                                                 tCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCg                                                                                                      >  1:5820731/1‑150 (MQ=255)
                                                  cggaggtatagccaccatcgcattcgcgggtaaacccgctcctacagggctcaatgtccacccaacaacctggcaggaggtccacatgtcactgAGCGTCTTCGACCTGTTCAAGATCGGCATCGGCCCCTCCAGCTCCCACACGGTCgg                                                                                                     <  1:5237502‑M1/56‑1 (MQ=255)
                                                    aGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGcc                                                                                                   >  1:6489240/1‑150 (MQ=255)
                                                     ggcggcCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGccc                                                                                                  <  1:4582562/150‑1 (MQ=255)
                                                           ccGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCg                                                                                            >  1:35582/1‑150 (MQ=255)
                                                            cGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGt                                                                                           >  2:5249614/1‑150 (MQ=255)
                                                                 tttGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTgg                                                                                      <  2:5511004/150‑1 (MQ=255)
                                                                    gAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGgcgc                                                                                   >  1:1327879/1‑150 (MQ=255)
                                                                    gAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGgcgc                                                                                   <  1:2114239/150‑1 (MQ=255)
                                                                       ccTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCt                                                                                >  2:3256416/1‑150 (MQ=255)
                                                                       ccTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCt                                                                                >  1:6995484/1‑150 (MQ=255)
                                                                        cTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTg                                                                               >  1:4285742/1‑150 (MQ=255)
                                                                         tAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGgt                                                                                                                                  >  2:4453351/1‑98 (MQ=255)
                                                                         tAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGgt                                                                                                                                  <  1:4453351/98‑1 (MQ=255)
                                                                         tAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTgt                                                                              >  2:6110761/1‑150 (MQ=255)
                                                                         tAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTgt                                                                              >  2:2373050/1‑150 (MQ=255)
                                                                                  ccccGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAgg                                                                     >  1:2193811/1‑150 (MQ=255)
                                                                                    ccGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGc                                                                   >  2:4604113/1‑150 (MQ=255)
                                                                                    ccGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGc                                                                   >  1:838290/1‑150 (MQ=255)
                                                                                    ccGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGc                                                                   >  1:3359030/1‑150 (MQ=255)
                                                                                    ccGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCAGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGc                                                                   >  1:6517742/1‑150 (MQ=255)
                                                                                     cGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACCATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGCCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGcc                                                                  >  2:2304394/1‑150 (MQ=255)
                                                                                          tGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTgcgc                                                             >  1:4841213/1‑150 (MQ=255)
                                                                                          tGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTgcgc                                                             <  1:5199367/150‑1 (MQ=255)
                                                                                                tGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgc                                                       >  2:32811/1‑150 (MQ=255)
                                                                                                tGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgc                                                       >  2:4808999/1‑150 (MQ=255)
                                                                                                 ggCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgcg                                                      <  2:2024664/150‑1 (MQ=255)
                                                                                                 ggCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgcg                                                      <  2:2558506/150‑1 (MQ=255)
                                                                                                 ggCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgcg                                                      <  2:5008870/150‑1 (MQ=255)
                                                                                                 ggCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAAcgcg                                                      <  1:150451/150‑1 (MQ=255)
                                                                                                   cgcgcAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGt                                                    <  1:6380416/150‑1 (MQ=255)
                                                                                                       cAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGc                                                <  2:137666/150‑1 (MQ=255)
                                                                                                         gagaCAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTg                                              <  1:738334/150‑1 (MQ=255)
                                                                                                         gagaCAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTg                                              >  2:5761336/1‑150 (MQ=255)
                                                                                                            aCAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAg                                           >  2:4298086/1‑150 (MQ=255)
                                                                                                              aaGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCg                                         >  2:3473846/1‑150 (MQ=255)
                                                                                                              aaGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCg                                         <  1:6702877/150‑1 (MQ=255)
                                                                                                               aGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCgt                                        <  2:7408700/150‑1 (MQ=255)
                                                                                                               aGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCgt                                        >  2:164610/1‑150 (MQ=255)
                                                                                                                  ccAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAATATCGGTGTCGGGAACTCCATCTCCCACACCGACGGCCCCATGCGTGCTGTCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTa                                     >  2:7283475/1‑150 (MQ=255)
                                                                                                                  ccAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTa                                     >  2:6812408/1‑150 (MQ=255)
                                                                                                                  ccAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTa                                     >  2:5100843/1‑150 (MQ=255)
                                                                                                                   cAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTaa                                    <  1:4154623/150‑1 (MQ=255)
                                                                                                                   cAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTaa                                    >  2:4247528/1‑150 (MQ=255)
                                                                                                                     gCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTaaaa                                  <  1:5313543/150‑1 (MQ=255)
                                                                                                                     gCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTaaaa                                  <  1:5103150/150‑1 (MQ=255)
                                                                                                                      cAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAAc                                 <  1:2751774/150‑1 (MQ=255)
                                                                                                                         gagGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGa                              <  1:32811/150‑1 (MQ=255)
                                                                                                                          agGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTACTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGAt                             <  2:554464/150‑1 (MQ=255)
                                                                                                                            gTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCg                           >  1:7301997/1‑150 (MQ=255)
                                                                                                                              gATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGaa                         <  2:6543805/150‑1 (MQ=255)
                                                                                                                              gATTCGACAAGGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGaa                         <  2:6995484/150‑1 (MQ=255)
                                                                                                                              gATACGACAATGCCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCACCACCCACACCGTCGGCCCCATGCGAGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGACTAAAACGGATCGaa                         <  2:6417179/150‑1 (MQ=255)
                                                                                                                                ttCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGt                       <  1:3768305/150‑1 (MQ=255)
                                                                                                                                    aCAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTgcgc                   <  2:5820179/150‑1 (MQ=255)
                                                                                                                                      aaTGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCt                 >  1:1153287/1‑150 (MQ=255)
                                                                                                                                      aaTGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCt                 >  1:4920667/1‑150 (MQ=255)
                                                                                                                                          gCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTAt             <  1:2842023/150‑1 (MQ=255)
                                                                                                                                            cATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCt                                               <  2:338603/114‑1 (MQ=255)
                                                                                                                                            cATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATgg           >  1:1042995/1‑150 (MQ=255)
                                                                                                                                             aTCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGc          <  1:1698827/150‑1 (MQ=255)
                                                                                                                                              tCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCt         <  1:3404453/150‑1 (MQ=255)
                                                                                                                                              tCAGAGTGTTCGACCTGTTCAAGATCGGTGTCGGTCCCTCCAGCTCCCACACCGTCGGCCCACTGAGTGCTGGCGCCCTTTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCt         <  1:3934604/150‑1 (MQ=255)
                                                                                                                                               cAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTc        >  1:6868094/1‑150 (MQ=255)
                                                                                                                                               cAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTc        <  2:4019012/150‑1 (MQ=255)
                                                                                                                                                  cGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCt     <  1:188820/150‑1 (MQ=255)
                                                                                                                                                  cGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCt     <  2:2968235/150‑1 (MQ=255)
                                                                                                                                                    tgtTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCTGt   >  2:5341364/1‑150 (MQ=255)
                                                                                                                                                    tgtTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCTGt   <  1:2490798/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCGGTTGCAGACGGCGAGGTGGGCGGTAAAAGCCCGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCGGTGAGCTGGAGCGTGTAAAACGGATCGAAGTGCGCCTGTATGGCTCGCTGTC  >  NC_002947/356524‑356822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: