| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,279,054 | C→G | 11.1% | intergenic (+79/+27) | rlmG → / ← PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,279,054 | 0 | C | G | 11.1% | 685.3 / 8.9 | 233 | intergenic (+79/+27) | rlmG/PP_4649 | ribosomal RNA large subunit methyltransferase G/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (125/76); new base G (3/28); total (128/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.19e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
GCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTT > NC_002947/5278906‑5279203 | gcgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCg > 1:6159420/1‑150 (MQ=255)gcgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCg > 1:2454990/1‑150 (MQ=255) cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt > 1:6610273/1‑150 (MQ=255) cgGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGt > 1:719166/1‑150 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 1:6196611/150‑1 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 1:5301667/150‑1 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 2:4533384/150‑1 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 2:3301835/150‑1 (MQ=255) ggTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 2:3302010/150‑1 (MQ=255) gttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 2:7419783/1‑150 (MQ=255) ttgttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTggg > 2:2670848/1‑150 (MQ=255) tgagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 1:4601187‑M1/89‑150 (MQ=255) gagcgtcgcagcgctgggtgtggcggcctgtgtgatgcggctgttcatgggggcggcgggcctgaccacacactgataaagagcggcAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTggg > 1:1219274‑M1/88‑150 (MQ=255) gttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCa > 1:1178410/1‑150 (MQ=255) gttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCa > 1:3408694/1‑150 (MQ=255) ttCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCaa < 2:1662305/150‑1 (MQ=255) tCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAg > 1:6340785/1‑150 (MQ=255) ccGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCGATCTAGCGCGTTGCCTGCTTCGTGGGCAAGc > 1:719002/1‑150 (MQ=255) cGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGcc < 1:2758490/150‑1 (MQ=255) ggggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGccc > 1:851144/1‑150 (MQ=255) ggggggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGccc > 1:2282897/1‑150 (MQ=255) gggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCt < 2:5923670/150‑1 (MQ=255) ggTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTg < 2:5854219/150‑1 (MQ=255) tGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGcc > 2:6383293/1‑150 (MQ=255) ggAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCGATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCg > 2:3721639/1‑150 (MQ=255) ggAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCg > 1:3489954/1‑150 (MQ=255) ggAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCg > 2:3721686/1‑150 (MQ=255) ggAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCg > 2:1170275/1‑150 (MQ=255) gAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGc > 1:304025/1‑150 (MQ=255) cAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGctct > 2:873209/1‑150 (MQ=255) tGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTAt > 1:2054314/1‑150 (MQ=255) cAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAgtgt > 2:4845386/1‑150 (MQ=255) ccccAACGTCGTTATTCATCAAAGCCCGCACGTGGGCGCGCCCCCGCCCCCTTTGTAGGGGGTTTGCCCGCCAACACGGCCACCGCCGGTGCAACCTCGGGGGTGGCCTGCTGGGTGGCCACGCCCGCTGCCGCTCTTTATCAGtgtgtg < 2:3210620/149‑1 (MQ=255) ccAAGTTCGTCATTC‑TTAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg < 1:3783643/114‑1 (MQ=255) ccAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTg > 2:3783643/1‑114 (MQ=255) ccAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTc > 2:6926296/1‑150 (MQ=255) ccAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTc > 2:454610/1‑150 (MQ=255) aGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAgg > 1:4141348/1‑150 (MQ=255) gggcGTCTTGC‑TGAACGCCCGCCCGTCGGCGCGCCCCCGCCCCGGTTGGCGCGGGCTGGCCCGCGAACACCGGCACCGCGGGTGCCCTGTCGCGCGTTGCGTGCTGCGTGGGAACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGc < 2:4676127/147‑1 (MQ=255) gTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgc > 1:5480386/1‑150 (MQ=255) gTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgc > 2:1548417/1‑150 (MQ=255) gTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCccgc > 1:3849140/1‑150 (MQ=255) ttC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg < 1:5062664/103‑1 (MQ=255) ttC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTgg > 2:5062664/1‑103 (MQ=255) c‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGcccc > 1:3072899/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGCACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 1:3260284/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 1:1389466/1‑150 (MQ=255) tGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCATTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGccccc > 1:6167962/1‑150 (MQ=255) gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCa > 2:5980161/1‑150 (MQ=255) gAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCa > 2:4036160/1‑150 (MQ=255) acGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACa > 2:5395393/2‑150 (MQ=255) cccAAGCAGGCCCCCCACCCCCCCCCTAGGAGCGGGATTGCCCCACAACACCGGCAACCCCTCACCCAACTACCGCGGTGCCTGCTACGGGCCCAACCCCCCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAg < 2:222549/148‑1 (MQ=255) cgccgcccCCCCCCCCCCTTAGGAGGGGGCTCGCCCCCAAACACCGCCACCCCCTGGGAAATCTAGCGCGTTGCCTGCACCGTGGCCAAGCCCCCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATc < 2:1299160/147‑1 (MQ=255) ggCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATca > 2:2953073/1‑150 (MQ=255) cgcccccgccccCGTAGGCGGGGGCTGGCCCGCTAACACGGGCAACGCCTGTGCCATCTCGCGCGTTGCCTGCTTGGTGGGCACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATcacaca < 2:3825302/150‑1 (MQ=255) cACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgc > 2:2883585/1‑150 (MQ=255) aCCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGGGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgcc < 2:3004257/150‑1 (MQ=255) cGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGgccgc > 1:4317270/1‑150 (MQ=255) cccGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCcaca > 2:2750268/1‑150 (MQ=255) aGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAg < 2:6372060/150‑1 (MQ=255) ttcGCGGGCAAGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAgc < 2:1212927‑M1/147‑1 (MQ=255) ggtggGGGCTTGCCCGCGAACACCGGAAACGCCTGTGCCATCTAGCGGGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAgc > 2:4643978‑M1/6‑150 (MQ=255) AGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAgcgc < 1:1490912‑M1/150‑1 (MQ=255) AGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAgcgc < 2:7064346‑M1/150‑1 (MQ=255) GGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGc > 2:4304737‑M1/1‑150 (MQ=255) GCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCt < 2:345757‑M1/150‑1 (MQ=255) cgAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGAAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCg < 2:5201060/150‑1 (MQ=255) gaccacCGGCACCGCCGGGGCCATCTCGCGCGTGGCCGGCTTGGTGGGCACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGc < 2:3917418/147‑1 (MQ=255) ccccGGCAACGCGGGTGCCATCTCGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa < 2:5163796/148‑1 (MQ=255) cacCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa < 2:2454990/150‑1 (MQ=255) acCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAg > 2:7381502/1‑150 (MQ=255) acCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGACGCCACACCCAGCGCTGCGACGCTCATCGCCCAg > 2:2294974/1‑150 (MQ=255) cGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt > 2:5468879/1‑150 (MQ=255) cGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt > 1:1120465/1‑150 (MQ=255) cGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGAt > 1:571954/1‑150 (MQ=255) ggCACCGCCTGTGCAATCTTGCGGGTTGCCTGGTTGGTGGGAACCCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATc < 1:5420144/150‑1 (MQ=255) gCACCGCCTGTGCAATCTCGCGGGTGGCCTGCTTGGTGGGAAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCa < 2:148292/150‑1 (MQ=255) gCAACGCGTGTGCCATCTAGGGGGTTGCCTGCTTGGTGGGAACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCa < 1:5377766/150‑1 (MQ=255) gCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAgtgtg < 1:1734430/69‑1 (MQ=255) ccTGTGCCATCTAGCGGGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACa < 2:5314521/150‑1 (MQ=255) gcaaTCTAGCGGGTTGCCTGCTTCGTGGGAAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCaa < 2:5595685/147‑1 (MQ=255) gCCATCTAGCGGGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCaa < 1:6706732/150‑1 (MQ=255) gCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCaa < 2:6159420/150‑1 (MQ=255) ccATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCacc > 2:6776947/1‑148 (MQ=255) tAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGt > 1:4251844/1‑150 (MQ=255) gcgcGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCa < 2:6271252/126‑1 (MQ=255) gcgTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCt < 2:3489954/150‑1 (MQ=255) gTTGCCTGCTTGGTGGGCACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGc < 2:2502590/150‑1 (MQ=255) ttGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGcc > 2:2911887/1‑150 (MQ=255) gCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCCGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCcac > 2:1368367/1‑150 (MQ=255) cggCTTGGTGGGCACGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAg < 2:719166/148‑1 (MQ=255) cTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAg < 1:4901115/150‑1 (MQ=255) cTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAg < 2:6610273/150‑1 (MQ=255) gCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGcccc > 2:6317839/1‑58 (MQ=255) gCTTCGTGGGCAAGCCCGCTGCCGCTCTTTACCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCg > 1:6313974/1‑150 (MQ=255) cTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCgg < 1:7419783/150‑1 (MQ=255) tCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGtt > 2:1993768/1‑150 (MQ=255) tCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGtt < 2:5325028/150‑1 (MQ=255) cGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGttt > 2:1758101/1‑150 (MQ=255) cGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGttt > 2:2389045/1‑150 (MQ=255) | GCGGTTGTTCCGGGGGGTGGAGCAGGTGGCGGCAACGCCCAAGTTCGTCATTC‑TGAAAGCCCGCAAGTAGGCGCGCCACCGCCCCCGTAGGAGCGGGCTTGCCCGCGAACACCGGCAACGCCTGTGCCATCTAGCGCGTTGCCTGCTTCGTGGGCAAGCCCGCTGCCGCTCTTTATCAGTGTGTGGTCAGGCCCGCCGCCCCCATGAACAGCCGCATCACACAGGCCGCCACACCCAGCGCTGCGACGCTCATCGCCCAGATCAGCAACAGCCAACCCAGTCGCTGCCACAGCGGTTT > NC_002947/5278906‑5279203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |