| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,285,963 | T→A | 5.4% | intergenic (+99/+39) | trmA → / ← pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,285,963 | 0 | T | A | 5.4% | 596.4 / 17.1 | 185 | intergenic (+99/+39) | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base T (123/49); new base A (7/3); total (130/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.66e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
TTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCACGCCGC > NC_002947/5285814‑5286110 | ttCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCtt > 2:3399802/1‑150 (MQ=255) cccGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGc < 1:4063059/150‑1 (MQ=255) cccGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATCGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGc < 1:2973031/150‑1 (MQ=255) taCCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCAAGCCcgctc < 1:2435964/150‑3 (MQ=255) ccaccaTATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGCTCGTTGTAGGAGCGGGCTTGCCCGCGAATg > 2:5044900/1‑150 (MQ=255) ccaccaTATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATg > 2:2815106/1‑150 (MQ=255) atatGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCg > 2:5575658/1‑150 (MQ=255) ggggggTTCTGCTGGTGCGGCGCTGATCGTTGTATGGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATGGATCGGCGGCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGc < 2:890478/148‑1 (MQ=255) gggTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCTCTGCGGccca < 2:5489766/150‑2 (MQ=255) gggTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCGACAATGATCGGCGGCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGcccc > 1:1984924/1‑150 (MQ=255) ggTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCa > 2:5224476/1‑150 (MQ=255) gTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCCAGCCCGCTCCGACAATGATAGGCGTCGGGGTACGCAGATCGTTTTAGGAGCGGGCTTGCCCCCGAAAGGGCCGCCGAGCGGCCCCaa > 1:5649493/1‑150 (MQ=255) gTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCaa > 1:99646/1‑150 (MQ=255) gctgGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTc > 2:5171439/1‑150 (MQ=255) ctgGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCa > 2:2040102/1‑150 (MQ=255) tgGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCAc < 2:7038520/150‑1 (MQ=255) gTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCCACAATGATAGGCGTCGGTGTACGCAGTTCGGTGTAGGGGCGGGCTTGCCCGCCAAAGGGCCGCCGCGCGGCCCCAACCATCAcca > 1:1967083/1‑149 (MQ=37) gTTCGGCGCTGATCGTTGTATTGCCGGCGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCt < 2:6747830/150‑1 (MQ=255) ttCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTc > 2:7396444/1‑150 (MQ=255) cGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAg < 2:4311762/150‑1 (MQ=255) cTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTc < 2:3546599/150‑1 (MQ=255) aTCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCgaa > 2:3644032/1‑150 (MQ=255) gTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCgaagaa > 2:2435852/1‑150 (MQ=255) ttGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGTTCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGt > 1:3014068/1‑150 (MQ=255) gaatgggCTGCAAAGCAGCCCCTTCGCGGGCCACCCCGCGCCGCCCATGTTCGGCGGGGGGGTTCGCCGATCGGGGTTGGTGGGGGCGTGCCCGCGGAAGGGCCGCCGAGCGGCCCCCAGCGTCCCCGCAGAAGTCGAAGAAGACgggcg > 2:887792/5‑147 (MQ=255) gCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGGGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGtct > 1:7281335/1‑150 (MQ=255) ccGGGGCTGCTTTGCAGCCCATTCGCGGGCACGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGtctc > 2:253679/1‑150 (MQ=255) ccGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCCCCTCAGAAGTCGAAGAAGACGGtctc > 2:253696/1‑150 (MQ=255) ccGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGtctc > 2:3582881/1‑150 (MQ=255) ccGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGGCGGGGTACGCAGATCGTTGTTGGAGCGGGCGTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCGTCACCTCAGAAGTCGAAGAAGACGGtctc > 1:5044366/1‑150 (MQ=38) gggCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTcccc < 2:3211319/150‑1 (MQ=255) gctgctGTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCtt < 2:2600450/150‑1 (MQ=255) tttGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCCGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTccccc > 2:6806481/1‑150 (MQ=255) tttGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTccccc > 2:400393/1‑150 (MQ=255) tGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTg < 2:5812247/150‑1 (MQ=255) ccATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCg < 2:5702639/150‑1 (MQ=255) aTTCGCGGGCAAGCCGGCTCCGACATTGATGGGCGTGGTTGTACGCAGATCGTTGTAGGCGGGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCCTCCCCCTGAATGCGGa < 1:2324425/150‑1 (MQ=255) aTTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGa > 2:5832211/1‑150 (MQ=255) gcgGGCACGCCCGCTCCCACTGTCCTCGGGGGGGGGGTCCGCCGCTGGTTGTCGGCGGGGGCTGGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATc < 1:2040102/150‑1 (MQ=255) gcgGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATc > 1:7116549/1‑150 (MQ=255) gcgGGCAACCCGGCTCCGACTTGGATGGGCGTGGTTGTCCGCTGTTGGTTTTTGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATc < 1:3745883/150‑1 (MQ=255) gggCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCaa > 2:1967601/1‑150 (MQ=255) aaGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCg > 1:757655/1‑150 (MQ=255) aaGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCg > 1:6730707/1‑150 (MQ=255) cccGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTa > 1:610062/1‑150 (MQ=255) cccGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTa > 1:2102724/1‑150 (MQ=255) ccGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGccc < 2:2175411/81‑1 (MQ=255) ccGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTAc > 1:4350003/1‑150 (MQ=255) ccGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTAc > 1:5540442/1‑150 (MQ=255) gCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGc > 2:4930248/1‑150 (MQ=255) gCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGc > 1:633636/1‑150 (MQ=255) cTCCGAAATTCATCGGCGTCGGTGACCGCACATCTTTCTAGGACCGGCCTTCCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGcc < 1:7059750/150‑1 (MQ=255) cgcaccttGCTCGGGGTGGGTGTCCGCCGCTCGTTGTAGGCGGGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGt < 1:2630822/144‑1 (MQ=255) ccGACATTGATCGGCGTGGTTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGt < 1:3586024/150‑1 (MQ=255) gACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCt > 1:4267080/1‑150 (MQ=255) ccttGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTc < 2:5998595/148‑1 (MQ=255) aTTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTcc > 2:433511/1‑150 (MQ=255) aTTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTcc > 1:2792880/1‑150 (MQ=255) aTTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTcc > 2:5630047/1‑150 (MQ=255) aTCGGCGTGGGTGTACGCAGATCTTTGTTGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATc < 1:1113559/150‑1 (MQ=255) aTCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATc > 1:1919997/1‑150 (MQ=255) ggCGTCGTTGTACGCTGTTCGTTGTCGGAGCGGGCTTGCCCGCTAATGGGCCGCAGAGCGGCCCCAAGCTTCAACTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCAc < 1:6650115/150‑1 (MQ=255) gCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACt > 2:1265173/1‑150 (MQ=255) cGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACtt > 2:6480648/1‑150 (MQ=255) ggTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCa < 2:4131310/150‑1 (MQ=255) ggTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCa < 2:4217850/150‑1 (MQ=255) ggTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCa > 2:612341/1‑150 (MQ=255) gtgtACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCaa > 2:4550219/1‑150 (MQ=255) tgtACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAAc > 2:6441780/1‑150 (MQ=255) tACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGc > 2:5490113/1‑150 (MQ=255) aCGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCt > 1:5779463/1‑150 (MQ=255) gctgATCGTTGTCGGTGGGGGGTGGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTg < 1:3299113/147‑1 (MQ=255) gCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTg < 2:3058270/150‑1 (MQ=255) gCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTg > 2:1863266/1‑150 (MQ=255) gCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGATTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGACTTCCCATCCACTTCGCAACGCTTg > 2:2949120/1‑150 (MQ=255) cAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTgg > 2:1053874/1‑150 (MQ=255) aTCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCaa > 1:4798054/1‑150 (MQ=255) gTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCa > 2:515711/1‑150 (MQ=255) aatGTCGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCa > 1:5308404/3‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCaa > 2:1157186/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCaa < 2:165742/150‑1 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCaa < 2:6132722/150‑1 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCaa < 1:6715661/150‑1 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCaa > 1:3451356/1‑150 (MQ=255) ttttggAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAg < 1:6090253/146‑1 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAgg < 1:4625635/150‑1 (MQ=255) tAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATCTCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCACTCAAGGt > 2:6667877/1‑150 (MQ=255) attcgCGGGCAAGCCCGCTAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGtt > 1:7422284/5‑150 (MQ=255) attcgCGGGCAAGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCaaa < 2:1259454/97‑1 (MQ=255) attcgCGGGCAAGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCaaa > 1:1259454/5‑101 (MQ=255) attcgCGGGCAAGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCg < 2:5464213/108‑1 (MQ=255) attcgCGGGCAAGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGtt > 2:3761416/5‑150 (MQ=255) ttcgCGGGCAAGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCATGGttt > 2:428331/4‑150 (MQ=255) ggAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGttt > 2:1306390/1‑150 (MQ=255) gAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTc > 1:6983695/1‑150 (MQ=255) aGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCa > 2:2911706/1‑150 (MQ=255) gCGGGCTTGCCGGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGATGATGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCAc < 1:1111580/150‑1 (MQ=255) gggCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCAcgc > 2:7104734/1‑150 (MQ=255) ccTTCCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCAcgccg < 1:2678169/149‑1 (MQ=255) ttGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTc > 1:5498030/1‑107 (MQ=255) | TTCCCGTATACCCACCATATGGAGAGTGGGGTTCTGCTGGTTCGGCGCTGATCGTTGTATTGCCGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCTCCGACATTGATCGGCGTCGGTGTACGCAGATCGTTGTAGGAGCGGGCTTGCCCGCGAATGGGCCGCAGAGCGGCCCCAAGCTTCACCTCAGAAGTCGAAGAAGACGGTCTCCCCTTCCCCCTGAATGCGGATATCAAAGCGGTACGCCGTCTTCCCATCCACTTCGCAACGCTTGGCAATCAAGGTTTCACGCCGC > NC_002947/5285814‑5286110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |