| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,334,393 | T→A | 5.3% | L10Q (CTG→CAG) | PP_4690 → | Rieske 2Fe‑2S family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,334,393 | 0 | T | A | 5.3% | 1360.4 / 44.6 | 415 | L10Q (CTG→CAG) | PP_4690 | Rieske 2Fe‑2S family protein |
| Reads supporting (aligned to +/- strand): ref base T (181/210); new base A (9/13); total (190/225) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.36e-01 | |||||||||||
Only 100 of 419 total aligned reads displayed.
GCCTTGTGGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGC > NC_002947/5334244‑5334541 | tgGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGa < 1:6758932/150‑1 (MQ=255) gCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAgg < 2:7112516/150‑1 (MQ=255) gCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAgg > 1:4773917/1‑150 (MQ=255) gCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAgg < 2:6053592/150‑1 (MQ=255) gCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAgg < 1:723923/150‑1 (MQ=255) gAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGc > 2:1558295/1‑150 (MQ=255) gAGCGGCGGAACTGCGCACCAGAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGGTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCAGGCCGAggga < 2:3752842/150‑2 (MQ=255) aGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGcc > 2:1443358/1‑150 (MQ=255) aGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGcc > 1:2278434/1‑150 (MQ=255) aGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCAGGCCGAgggat < 2:1208165/150‑3 (MQ=255) ggcggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCaaa < 2:4543132/150‑1 (MQ=255) ggcggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCaaa < 1:4381678/150‑1 (MQ=255) gcggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAg > 2:1841078/1‑150 (MQ=255) cggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGc > 1:6046748/1‑150 (MQ=255) cggAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGc < 2:1963933/150‑1 (MQ=255) aaCTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCcgc < 2:2571342/150‑1 (MQ=255) cTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCgcgc < 1:7399970/150‑1 (MQ=255) cTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCgcgc > 1:1855217/1‑150 (MQ=255) cTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTGTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCgcgc > 2:5465626/1‑150 (MQ=255) tGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGcc > 1:5747604/1‑150 (MQ=255) gcACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTc < 1:2413925/150‑1 (MQ=255) aCCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAg < 2:2004033/150‑1 (MQ=255) tAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTa < 2:5363833/150‑1 (MQ=255) tAGGCAGCCGGGCGCAGAGAATGAGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTa < 2:7134299/150‑1 (MQ=255) gCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGAc < 1:3799009/150‑1 (MQ=255) cAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACg < 2:220520/150‑1 (MQ=255) cGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCt < 1:1187862/150‑1 (MQ=255) gcgcAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGa > 1:1522981/1‑150 (MQ=255) gcAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAAc > 2:3540874/1‑150 (MQ=255) agagAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTg > 1:6903668/1‑150 (MQ=255) gagaATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGt < 1:1154894/150‑1 (MQ=255) agaATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGtt > 2:2137803/1‑150 (MQ=255) agaATGCGATCAATTTGATAACTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGtt < 2:5979548/150‑1 (MQ=255) gaAGGCGATCAATTTGATAATGAGTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCGTTGGACATCCCGCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTc < 2:4664389/150‑1 (MQ=255) aaTGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCg < 2:909101/150‑1 (MQ=255) gCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcg < 1:4336147/150‑1 (MQ=255) cGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgt < 1:5466757/150‑1 (MQ=255) aTCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGtt > 2:2364997/1‑142 (MQ=255) aTCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc < 1:4158797/150‑1 (MQ=255) aTCAATTGGATAATTATGCGCAGTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGgcgtgc < 2:4827948/150‑1 (MQ=255) ttGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGcc > 1:6290239/1‑150 (MQ=255) gATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCaa > 1:25198/1‑150 (MQ=255) aTAATTATTCGCATTGTAGCGTCAAGCCATCACGTTTTTCACGGGTAATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAg < 1:288830/150‑1 (MQ=255) aaTTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCa > 2:2842607/1‑109 (MQ=255) aaTTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGc > 1:6550310/1‑150 (MQ=255) aaTTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGc > 1:1279821/1‑150 (MQ=255) ttattCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCa < 2:4055703/150‑1 (MQ=255) ttattCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCa > 2:2991153/1‑150 (MQ=255) ttCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGgt < 2:6379465/150‑1 (MQ=255) tCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGgtg > 2:3854132/1‑150 (MQ=255) tCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGgtg > 1:1000644/1‑150 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCGTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 1:3878850/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 2:3965486/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 1:5937171/150‑1 (MQ=255) cATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtac < 1:2577381/150‑1 (MQ=255) aTTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacc > 1:23100/1‑150 (MQ=255) aTTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacc > 2:651054/1‑150 (MQ=255) ttGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacct > 1:5240526/1‑150 (MQ=255) tGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacctg > 2:7041311/1‑150 (MQ=255) ggAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCGACGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacctgt > 2:2747348/1‑150 (MQ=255) ggAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacctgt > 1:7143680/1‑150 (MQ=255) gAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAg > 1:6220139/1‑139 (MQ=255) gCGTCAAGCCATCTCGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGtgtacctgtacc < 1:775018/150‑1 (MQ=255) gTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCAGGCCGAgggat < 2:5634784/76‑3 (MQ=255) cAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCaa < 2:5527142/150‑1 (MQ=255) aGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAAcc > 2:6690501/1‑150 (MQ=255) cATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCt < 1:6108841/150‑1 (MQ=255) tCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGc < 1:487424/150‑1 (MQ=255) gtTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCAc > 2:7164063/1‑150 (MQ=255) gtTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCAc > 2:5213264/1‑150 (MQ=255) cACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCggg < 2:1646694/150‑1 (MQ=255) aCGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGa < 2:6765029/150‑1 (MQ=255) ggTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACAt > 1:5612694/1‑150 (MQ=255) aTCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCg < 2:4899662/150‑1 (MQ=255) aTCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCg > 2:1522080/1‑150 (MQ=255) aTCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCg < 1:3248267/150‑1 (MQ=255) tCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGc > 1:5677846/1‑150 (MQ=255) cTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTg > 1:158617/1‑150 (MQ=255) aTGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTgg > 1:6637181/1‑150 (MQ=255) tGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTggg < 1:2448041/150‑1 (MQ=255) gCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGc > 2:3270744/1‑55 (MQ=255) gCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGc > 2:6841987/1‑150 (MQ=255) cACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTggg > 2:4237216/1‑148 (MQ=255) cTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCaga < 1:4559535/150‑1 (MQ=255) ttCCTTTGTACATCCCTCGGCCTGGCCGGGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCagag > 1:917528/1‑150 (MQ=255) ttCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCagag < 2:592800/150‑1 (MQ=255) tCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAgg > 1:6375258/1‑150 (MQ=255) cTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGAc > 1:3538450/1‑150 (MQ=255) tttGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGAcg > 1:1985639/1‑150 (MQ=255) ttGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGAcgc < 1:3127035/150‑1 (MQ=255) cATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTc > 1:2643284/1‑150 (MQ=255) aTCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCt < 1:5133534/150‑1 (MQ=255) tCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTg < 1:2795071/150‑1 (MQ=255) cccTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTgg < 2:6209193/150‑1 (MQ=255) cccTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTgg < 2:7406472/150‑1 (MQ=255) ccTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGa > 1:6437736/1‑150 (MQ=255) ccTCGGCCAGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGa > 2:512502/1‑150 (MQ=255) gCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACa < 1:2151660/150‑1 (MQ=255) gCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACa < 1:5403215/150‑1 (MQ=255) ccTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAg < 1:4039409/150‑1 (MQ=255) | GCCTTGTGGCGAGCGGCGGAACTGCGCACCATAGGCAGCCGGGCGCAGAGAATGCGATCAATTTGATAATTATTCGCATTGGAGCGTCAAGCCATCACGTGTTTCACGGGTCATCCTTGCCATGCACTTCCTTTGTACATCCCTCGGCCTGGCCGAGGGCCAAAGCCGCGCCTTCAGCGTAGACGGCCTCGAACTGTTCGGCGTGCGTCGCCAAGGCCAGGTGTACCTGTACCGCAACCGCTGCCCGCACCGGGACATCCCGCTGAACTGGGCAGAGGACGCGTTTCTGGATGACAGC > NC_002947/5334244‑5334541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |