Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,451,295 A→C 13.3% Q148P (CAG→CCG)  thiE → thiamine‑phosphate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,451,2950AC13.3% 596.2 / 18.3 288Q148P (CAG→CCG) thiEthiamine‑phosphate synthase
Reads supporting (aligned to +/- strand):  ref base A (155/86);  new base C (17/29);  total (172/116)
Fisher's exact test for biased strand distribution p-value = 8.72e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 288 total aligned reads displayed.

CAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGC  >  NC_002947/5451147‑5451443
                                                                                                                                                    |                                                                                                                                                    
 aGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAgg                                                                                                                                                    <  2:2563951/150‑1 (MQ=255)
 aGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAgg                                                                                                                                                    <  2:6463556/150‑1 (MQ=255)
    cAATCATCGGATACACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTAAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGccc                                                                                                                                                 <  1:3105354/150‑1 (MQ=255)
     aaTCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCCATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCGGCGCGCGCCGGcccc                                                                                                                                                >  1:3886261/1‑149 (MQ=255)
     aaTCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCGGCTCGAGCAGGCCcg                                                                                                                                                >  2:6558194/1‑150 (MQ=255)
           gggCTCCACCTGCCCCGCCAGCCTCGTACTGGCCGCCCAGGCTGCCAGCGATGGCGCCTGCTTGGTGGCCTTTGGCGGCTCCTTAATTTCTGTCACCACGCGGGGCGCGCCGGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCa                                                                                                                                          <  1:3544276/149‑1 (MQ=255)
            ggCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCGGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAg                                                                                                                                         <  2:6742724/150‑1 (MQ=255)
             gCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCCGCTACGTGGCCTGTGGCCGCGTCTTCCATTCTGTCCCCCAGCCGGGCGCGCCCGCTGCCAACGGCGGCCGGCGCGCGCCCGCCCGCGcccccg                                                                                                                                        >  2:4214461/1‑147 (MQ=255)
             gCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCacg                                                                                                                                        >  1:6367121/1‑148 (MQ=255)
              cTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCACGCGGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGt                                                                                                                                       <  2:3460042/150‑1 (MQ=255)
               tCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGcccccgtg                                                                                                                                      >  1:6116676/1‑145 (MQ=255)
                     tGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCACGCCCGCCCCCCGCTGAAACTg                                                                                                                                >  1:6462433/1‑150 (MQ=255)
                      gCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCCGGCCCGCGCCCCGGTGACACAGc                                                                                                                               >  1:7226572/1‑150 (MQ=255)
                      gCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTGTGGCCGCTTCTTCCATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACAGc                                                                                                                               >  2:2330768/1‑150 (MQ=255)
                            ccAGCCTCGAACGGGCCGCCCAGGCTGCCAGCGACGGCGCCAGCTACGTGGCCTTGGGCCGCTTCTGCAATTCGGTCACCACGCCGGGCGCGCCCGCGGCCACCGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCg                                                                                                                         <  2:3544728/150‑1 (MQ=255)
                               gCCTCGAACTGGCCGCCCAGGCTGCCAGCGACGGCGCCAGCTACGTGACCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCACCGTCGGCCTGCTCGAGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCg                                                                                                                      <  2:881560/150‑1 (MQ=255)
                                  tCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACAGCCGATCGCCGTGa                                                                                                                   >  1:6151795/1‑150 (MQ=255)
                                  tCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCGCGAGCCGGCCCGCGCCCCGGGGAAACAGCCGATCGCCGGGa                                                                                                                   >  1:3440800/1‑150 (MQ=255)
                                   ttcgcTGGCAGCCTGGGCGGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGag                                                                                                                  >  2:2801273/5‑149 (MQ=255)
                                      gcTGGCAGCCTGGGCGGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCGCGAGCCGGCCCGCGCCCACGTGAAACAGCCCATCGCCGTGAGCgg                                                                                                               >  1:454388/2‑150 (MQ=255)
                                         ggCCGCCCCGGCTGCCAGCGACGGCGCCAGCTAGGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCACGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGCGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTgg                                                                                                            <  1:1766137/150‑1 (MQ=255)
                                         ggCCGCCCAGGCTGCCAGCGAAGACGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCGGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTgg                                                                                                            <  2:493406/150‑1 (MQ=255)
                                           ccgccCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCa                                                                                                          >  2:1001236/1‑150 (MQ=255)
                                             gccCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTGCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCCGGTGAAACTGCCGATCGCCGTGCTCGGGGGCCTc                                                                                                        >  2:4345264/1‑150 (MQ=255)
                                                     tGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGGGATCGGTGGCATCACCCACGa                                                                                                >  1:2977106/1‑150 (MQ=255)
                                                     tGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCGGCTCGAGCAGGCCCGCGCCCCGGTGAAACAGCCGATCGCCGTGATCGGTGGCATCACCCTCGa                                                                                                >  2:368019/1‑150 (MQ=255)
                                                        cAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCCGGCCCGCGCCCAGGTGAAACAGCCGATCGCCGTGATCGGGGGCATCACCCGCGACaa                                                                                             >  2:25274/1‑150 (MQ=255)
                                                         aGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGGCGGCGCGAGCAGGCCCGCGCCCCGGTGAAACGGCCGCTCGCCGGGAGCGGGGGCGTCACCCACgcccac                                                                                            >  1:2069853/1‑145 (MQ=255)
                                                         aGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGCTCGCCGTGATCGGTGGCATCACCCTCGACAAc                                                                                            >  2:6931501/1‑150 (MQ=255)
                                                         aGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAAc                                                                                            >  2:7284254/1‑150 (MQ=255)
                                                           cgtcggCGCCAGCTCGGTGGCCTTTGGCGGATTCTTCACTTGTGCCACAACGCGGGGCGCGCCCGCCCCCACCGTCGGCCTGCTCGCGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAAcgc                                                                                          <  1:5201738/146‑1 (MQ=255)
                                                                gcgcCCGCTAGGTGGCATTTTGCCGCTACTTCAATTCTGTCACCATGCCGGGCGCGCCCGCTGCCAAGGTCGGCCTGCTCTAGGCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGccc                                                                                     <  2:6708781/150‑1 (MQ=255)
                                                                gcgcCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGAACGCCGTGATCGGTGGCATCACCCACGACAACCCCGccc                                                                                     >  2:3325108/1‑150 (MQ=255)
                                                                  gcCAGCTACGTGGCCTTTGGCCGCTTATTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCCCCCCCAGGTGAAACTGACGCTCTCCCTGCTCGGTGGCCTCACCCACGACAACGCCCCCCCa                                                                                   >  2:6288599/1‑150 (MQ=255)
                                                                           ttGGACTTTGGCCTATTCTTCTATTCTGTCACCCCGCGGGGGGCGCCCGCTGCCACCGTCGGCCTGCTGGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGcc                                                                          <  2:99207/149‑1 (MQ=255)
                                                                           gTGGCTTTTGGCCGATTCTTCAATTCTGTCACCCAGCCGGGCGCGCCCGCTGCCCACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGcc                                                                          <  1:7325089/150‑1 (MQ=255)
                                                                           gTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCACGTGAAACTGCCGATCGCCGTGATCGGTGGCAACACCCTCGACAACGCCGCCCCACTCGTCGcc                                                                          >  2:3717117/1‑150 (MQ=255)
                                                                            tGGCCTTTGGCCGCTTCTTCAATTCTGTCACCACGCCGGGCGCGCCCGCTGCCAACGTCGGCGTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGccc                                                                         <  2:4655953/150‑1 (MQ=255)
                                                                             ggCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCa                                                                        >  2:1432335/1‑150 (MQ=255)
                                                                               ccTTTGGCCTCTTCTTAAATTCTGTCACCACGCCGGGCGCGCCCGCGGCCACCGGCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTTGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACg                                                                      <  1:4211165/150‑1 (MQ=255)
                                                                                cTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGCCCCGCGCCCAGGTGAAAATGCCGATCGCCGTGATCGGTGGCATAACCCACGACAAAGCCCCCCCACAGGTCGCCCACgg                                                                     >  1:4458417/1‑150 (MQ=255)
                                                                                 tttGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGgc                                                                    >  2:661818/1‑150 (MQ=255)
                                                                                    ggCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACAGGTCGCCCACGGCGcc                                                                 >  2:1655819/1‑150 (MQ=255)
                                                                                      ccGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACAGCCGATCGCCGTGATAGGTGGCATCAACCACGACAAAGCCGCCCCACAGGTCGCCCACGGCGCCGa                                                               >  1:2399251/1‑150 (MQ=255)
                                                                                      ccGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCACGCCCCCGCCCCCGGGAAACAGCCGAACGCCGGGCTCGGTGGCATCACCCACGACACCCCCCCCCCACAGGGCGCCCACGccgccgc                                                               >  1:4595255/1‑149 (MQ=255)
                                                                                      ccGCTTCTACAAATCGGTCACCACCCCGGGCGCGCCCGCGGCCACCGCCGGCCTGCTCGCGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGa                                                               <  1:2344504/150‑1 (MQ=255)
                                                                                       cGCTTCTTCAATTCTGGCCCCCAGCCGGGCGCGCCCGCTGCCACCGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGAc                                                              <  2:4157683/150‑1 (MQ=255)
                                                                                           tcttctATTCTGTCACCACGCGGGGCGCGCCCGCTGCCACCGTCGGCCTGGTCGAGCAGGCCCGCGCCCAGGTGAATCTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACctgc                                                          <  2:7069927/150‑1 (MQ=255)
                                                                                           tcttcAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCCACGTCGGCCGGCGCCAGCAGGCCCCCGCCCAGGTGAAACTGCCGCTCGCCGGGATCGGTGGCCACACCCACGACAACGCCGCCCCACTGGGCGCCCACGGCGCCGACctgc                                                          >  2:608/1‑150 (MQ=255)
                                                                                           tcttcAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACctgc                                                          >  2:4762420/1‑150 (MQ=255)
                                                                                            cttcAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGcc                                                                 >  2:6199560/1‑142 (MQ=255)
                                                                                             ttcAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACctgctg                                                        >  2:5622709/1‑150 (MQ=255)
                                                                                             ttcAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCCAGCCGGCCCGCGCCCACGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCACGACAACGCCCCCCCACGGGTCGCCCACGGCGCCGACcggcag                                                        >  1:1675200/1‑148 (MQ=255)
                                                                                             tacAATTCTCTCACCAACCCGGCCCCGCCCGCTCCCAACGCCGCCCTGCACCAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTTATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACctgctg                                                        <  2:6221165/148‑1 (MQ=255)
                                                                                                atttCTGTCACCCAGCGGGGCGCGCCCGCTGCCACCGTCGGCCTGCTCGAGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCg                                                     <  1:2220342/148‑1 (MQ=255)
                                                                                                aaTACTGTCACCACGCCGGGCGCGCCCGCTGCAAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCg                                                     <  2:7428421/150‑1 (MQ=255)
                                                                                                 cttCTGCCCCCACGCCGGCGCCCCCCGCTGCCCCCGTCGGCCTGCCCGCGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCgg                                                    <  1:5697345/149‑1 (MQ=255)
                                                                                                 aTTCTGCCACCCCGCCGGGCGCGCCCGCTGCCACCGGCGGCCTGCTCGCGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCgg                                                    <  1:1105265/150‑1 (MQ=255)
                                                                                                  ttCTGACACCCCGCGGGGCGCGCCCGCGGCCAACGGCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGt                                                   <  1:6651111/150‑1 (MQ=255)
                                                                                                   gcggTCCCCACGCCGGGCGCGCCCGCTCCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTg                                                  <  2:211332/147‑1 (MQ=255)
                                                                                                    cTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCAACAATGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGa                                                 >  2:2977197/1‑150 (MQ=255)
                                                                                                     tGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGAt                                                >  2:3635168/1‑150 (MQ=255)
                                                                                                      gTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCCGGCCCCCGCCCAGGTGAAACAGCCGATCGCCGTGATCGGGGGCATCACCCGCGACAACGCCGCCCCACAGGGCGCCCACCGCGCCGGCCAGCTGGCGGTGATc                                               >  1:371090/1‑150 (MQ=255)
                                                                                                         aCCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCAc                                            >  2:3013486/1‑150 (MQ=255)
                                                                                                         aCCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGGGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCAc                                            >  1:480340/1‑150 (MQ=255)
                                                                                                         aCCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCACGTGAAACTGCCGATCGCCCTGATCGGTGGCATCACCCCCGACAACGCCGCCCCACAGGTCGCCCACCGCGCCGCCCTGCTGGCGGTGATCCAc                                            >  1:2036779/1‑150 (MQ=255)
                                                                                                         aCCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCGCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCCACAACCCCGCCCCACGGGTCGCCCACCGCCCCGACCAGCTGGCGGTGATCCAc                                            >  1:499204/1‑150 (MQ=255)
                                                                                                           cAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTTATATATCATGCCCGCGCCCAGGTGAAAAAGCCGATCGCCGTGATATGTTGCATAACCCTCTACAAAAACGCCACAATATTAGCCCAACGCGCCGACATGCTGTAGGTGAtgaaaat                                          >  1:5791784/1‑144 (MQ=255)
                                                                                                             cgCCGGGCGCGCCCGCTGCCACCGGCGGCCTGCTCGCGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCt                                        <  2:4046008/149‑1 (MQ=255)
                                                                                                               ccGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGCTCGGGGGCATCACCCGCGACAACGCCGCCCCCCTGGTCGCCCATGGCGCCGACCTGCTGGCGGTGATCCACGGCTTg                                      >  1:4706347/1‑150 (MQ=255)
                                                                                                                cGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGCTCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTgg                                     >  2:1372573/1‑149 (MQ=255)
                                                                                                                     gcccccGCGGCCCCCGGCGGCCGGCCCGAGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGt                                <  1:2715941/147‑1 (MQ=255)
                                                                                                                       gcCCGCTGCCAACGCCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGc                              <  2:2437810/150‑1 (MQ=255)
                                                                                                                        cccGCTCCAACCGTCGGCCGGCTCGCGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGcc                             <  2:6983961/150‑1 (MQ=255)
                                                                                                                         ccGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCg                            >  2:5269697/1‑150 (MQ=255)
                                                                                                                         ccGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCg                            >  1:5909265/1‑150 (MQ=255)
                                                                                                                          cGCTCCCAACGTCGCCCTGATCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGa                           <  2:3875124/150‑1 (MQ=255)
                                                                                                                             tcccAACGTCGCCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAg                        <  2:2889923/148‑1 (MQ=255)
                                                                                                                              gCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgc                       >  1:5509611/1‑150 (MQ=255)
                                                                                                                               ccAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgcg                      >  2:1477455/1‑150 (MQ=255)
                                                                                                                                cAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCGTCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgcgc                     >  2:3912942/1‑150 (MQ=255)
                                                                                                                                cAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgcgc                     >  2:549050/1‑150 (MQ=255)
                                                                                                                                 aaCGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgcgcg                    >  2:2036069/1‑150 (MQ=255)
                                                                                                                                 aaCGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAgcgcg                    >  2:3739485/1‑150 (MQ=255)
                                                                                                                                   cGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCAGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCa                  <  2:5366555/150‑1 (MQ=255)
                                                                                                                                      cGGCCTGCGCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGa               <  2:5935459/150‑1 (MQ=255)
                                                                                                                                       ggCCTGCTGGCGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGaa              <  2:1832494/150‑1 (MQ=255)
                                                                                                                                       ggCCTGCTCGAGCCGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGaa              <  1:3072435/150‑1 (MQ=255)
                                                                                                                                       ggCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGaa              >  1:3219161/1‑150 (MQ=255)
                                                                                                                                       ggCCGGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGaa              <  1:4074992/150‑1 (MQ=255)
                                                                                                                                        gCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAg             >  2:239474/1‑150 (MQ=255)
                                                                                                                                          cTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGc                                                                           <  1:1493209/86‑1 (MQ=255)
                                                                                                                                           tGCTCGAGCAGGTCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCa          >  1:6867119/1‑150 (MQ=255)
                                                                                                                                             cTCGACCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCAcc        <  1:6098993/150‑1 (MQ=255)
                                                                                                                                              tCGAGCAGGCCCGCGCCCGGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCAccc       >  1:776032/1‑150 (MQ=255)
                                                                                                                                                gAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCg                                  >  1:120154/1‑121 (MQ=255)
                                                                                                                                                gAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCg                                  <  2:120154/121‑1 (MQ=255)
                                                                                                                                                gAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACccgc     >  1:3614894/1‑150 (MQ=255)
                                                                                                                                                 cgCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACccgcc    <  2:4613768/149‑1 (MQ=255)
                                                                                                                                                 aGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACccgcc    <  2:5754995/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGCCCGCGCCCAGGTGAAACTGCCGATCGCCGTGATCGGTGGCATCACCCTCGACAACGCCGCCCCACTGGTCGCCCACGGCGCCGACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGC  >  NC_002947/5451147‑5451443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: