| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,490,159 | T→C | 16.8% | intergenic (+68/‑79) | purH → / → purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,490,159 | 0 | T | C | 16.8% | 418.0 / 63.0 | 179 | intergenic (+68/‑79) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| Reads supporting (aligned to +/- strand): ref base T (67/78); new base C (14/15); total (81/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.11e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACG > NC_002947/5490010‑5490308 | gCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAAAACGAGGGTGGAtt > 2:5385554/1‑150 (MQ=255) gATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAcc > 2:586211/1‑150 (MQ=255) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgc < 1:1263660/150‑1 (MQ=255) tGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgc < 2:5225517/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCTGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:7217360/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCTGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:5531846/150‑1 (MQ=255) gCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgcc < 1:4724672/150‑1 (MQ=255) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGCGGGGGTTGCCC‑CGCAAAAGATGGTGGGTTGAccgccc > 2:1248567/1‑149 (MQ=255) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGGGTTGCCGCGAAAAAGCTGGTGGATTAAcccccc > 2:5334224/1‑149 (MQ=255) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgccg < 2:1882976/150‑1 (MQ=255) cTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCAccgccg < 2:6465016/150‑1 (MQ=255) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTcgcg < 1:3359279/150‑1 (MQ=37) aTCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgcg < 1:964085/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:1764237/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCgg < 2:4141241/150‑1 (MQ=37) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:4008325/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 1:4453381/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:6647627/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:3572443/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:4721544/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:6740435/150‑1 (MQ=255) tCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:359093/150‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGTGGCTTGCGCCGAACACTGTGGGAGC‑GGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCgg < 1:580993/150‑1 (MQ=14) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCggg < 2:5410018/150‑1 (MQ=37) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCggg < 1:4161546/150‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCggg < 1:6544684/150‑1 (MQ=255) cGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCggg < 1:4189403/150‑1 (MQ=255) tgcCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGc < 1:2255823/149‑1 (MQ=255) ccGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCg < 1:1630184/150‑1 (MQ=255) cgacgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGc < 1:2483670/150‑1 (MQ=255) gacgaGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTCCCGCCACTAATTACGCGGATCCCGAGGCACGTCGAGATC‑CTGTGGGAGC‑GGGGGTGCCCGCGCCTGCGCTGGGGGGGTCCCCGCCGCCGGCGCGGGGCAGCCCGcg > 2:4016077/1‑149 (MQ=255) tCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCGTGACCCCGAGAACGATGGGGGGTTCCCCGCCCCCTTAGCGGGCCAGCCCGCGCCCCCAGAGTTCg > 2:4311820/1‑150 (MQ=255) gcgATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGGGTGCCCCCGAAATAGATGGTGGGTTCACCGCCCCAGTCGCGGGCCAGCCCGCACCCACCGGGTTGGgc > 2:2882795/1‑150 (MQ=255) tCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCCCCAATACGATGGGGGGTTCACCGCCGCCTTCGCGGGCCAGCCCGCGCCCACAGTGGTGGGCGCAAGcc > 2:2952387/1‑150 (MQ=255) cagtGGCTTGCGCAACTCCCCCCATTAATTACGCGGACCCGGCGGCAGGCGGAGATC‑GTGTGGGAGC‑GGGCTTCCCGGCTAATACTTTGGTTTATCCCCCGCCGCATACGCGGCCACCCCCGCTCCCACAGTGTTCGGCGCAAGCCACgg < 2:311564/147‑1 (MQ=255) cACTGGCATGCGCCACTTCCGCCACTATTTACGCGTATCCCGAGGCTAGTCTAGATC‑CTGTGGGTGC‑GGGCTTGCCCGCTAATCCGTTGGTGGATTCACCGCCGCATTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACgg < 2:6725131/150‑1 (MQ=38) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGc < 1:2417417/120‑1 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGc > 2:2417417/1‑120 (MQ=255) tGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCGTGCCCGCCAATACGAAGGGGGATTGCCCGCCCCACTCGCGGGCCACCCCGCACCCACAGTGGTCGGCGCAAGCCACCGGag > 2:4782379/1‑149 (MQ=255) tggcgcCACCCCCGCACCTAATGCCGCGGTTCCCGCGGCATGTCTCCCCC‑GGGGGGGCGC‑GGGCTGGCCCGCTAATCCGTTGTTGCATCCCCGCCCGCATTGGCGGGAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACt < 2:867982/148‑1 (MQ=255) tGCGCCACTGCCGCAACTAATTACGCGGATCCCGAGGCACGTCGAGACC‑CTGGGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGTTTTCACCGCCGCCTTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACtt < 2:1168812/150‑1 (MQ=38) gcCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCgg < 2:1815804/102‑1 (MQ=255) cACTCCCGCCACTAATTCCGCGGATCCGGCGGCAAGTCGAGAAC‑CTGTGGGAGC‑GGGCTTGCCCGCTAATACTTTGTTGGATACACCCCCCCATTCGCGGCCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATc < 1:1123195/150‑1 (MQ=255) gCCACTAATTACGCGTAGCCCGAGGCACGTCTAGATC‑CTGTGGGTGC‑GGGCTTGCCCGCTAATCGTATGGTGGATTCACCGCCGCTTTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGttt < 2:7116363/150‑1 (MQ=255) cTAATTACGCGGATCCCGTGGCAAGTCGATATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGAGGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGAc < 2:495080/150‑1 (MQ=255) aaTTACGCGGACCCCGAGGCACGTCGAGATC‑CTGTGGGTGC‑GGGCTGGCCCGCTAATCCGAGGGTGGATGCACGGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACAt < 2:4589830/150‑1 (MQ=38) ccgcgtttCCCGCGGAAAGTCGAGATC‑GTGTGGGAGC‑GGGCTGGCCCGCTAATACGATGGGGTATTCACCGCCGCATTCGCGGGAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:439209/143‑1 (MQ=255) aCGCGGATCCCGTGGAACGTCGAGTTC‑CTGTGGGCGC‑GGGCTTGCCCGCTAATACGTTGGTGTTTACACCGCCGCATTCGCGGGAACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:6255832/150‑1 (MQ=255) aCGCGGACCCCGCGGCACGTCGATATC‑GTGTGGGAGG‑GGGCTGGCCCGCTAATAGGTTGGTGTTTTCACCGCCGAATTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGaaa < 2:6256064/150‑1 (MQ=255) cgGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCGTGCCCCCGCAAACCATGGTGGGTTAACCCCCCCCGTCGCGGGCCAGCCCCCGCCCCCCGGGGTCGGCGCCACCCCCGGGGTCACAGGGATCGCGGGTTTGGCAGGGAAGtt > 2:3681331/1‑150 (MQ=255) ggATCCCGAGGCACGTCGCGATC‑CTGTGGGCGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGttt < 2:474968/150‑1 (MQ=255) aTCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgcg > 1:6041030/1‑76 (MQ=255) aTCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTcgcg < 2:6041030/76‑1 (MQ=255) tCCCGTGGCAAGTCGAGATC‑GGGGGGGCGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 2:4168824/150‑1 (MQ=255) ccccGCGGCATTTCGAGTTC‑CTGGGGGCGC‑GGGCTTGCCCGCGAATACGTTGGTGGATTCACCGCCGCTTTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 2:406055/149‑1 (MQ=38) cGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGGTTGCCCCCCGAAACCATGGTGGTTTAAACCCCCCAAACCCGGGCCAGCCCGCGCCCCCCGTGTTCGGCGCAAGCCACGGGAGCACGGTGATAGAGGGTTTTAAAAGAAAGTTTTgttaa > 2:2405839/1‑146 (MQ=255) gaTC‑CTGTGGGAGC‑GGGCTTGCCCCCGAATACGGTGGTGGATTCACCGCCGCATTCGCGGGGAAGCCCGCGCCCCCCGTGTTCGGCGCAAGCCCCGGGATCACTTGAATAGAGGTTTTTGCATGGAAGTTTTTATAATAGGCAGCGGTgg > 2:7345125/1‑150 (MQ=25) cTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGt < 2:7214254/150‑1 (MQ=255) gtgGGCGC‑GGGCTGGCCCGCGATTACGTTGGTGGTTTCACCGCCGCATTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:2017239/150‑1 (MQ=255) gtgGGAGG‑GGGCTTGCCCGCTTATATGATGGTGGATTCACCGCCGCTTTGGGGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:6896837/150‑1 (MQ=255) gtgGGAGG‑GGGCTGGCCCGCTAACACGTGGGGGGATTCCCCGCCCCATGCGGGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 1:4830961/150‑1 (MQ=255) gtgGGAGC‑GGCCTGGCCCGCGAATCCGCTGGGGGATTCCCCGCCGCAGGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGa < 2:6587366/150‑1 (MQ=255) gC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGc > 2:1933471/1‑150 (MQ=255) c‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGACTCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGcc > 2:395194/1‑150 (MQ=255) gggCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGccc > 2:5346800/1‑150 (MQ=255) gCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctg > 2:6998036/1‑150 (MQ=255) cTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctgg > 1:686295/1‑150 (MQ=255) ttGCCCGCTACTACGATGGTGGATTCACCGCCGCATTCGCGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc < 2:5259384/150‑1 (MQ=255) ttGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggc > 1:3446493/1‑150 (MQ=255) ccccGCCAATACGATGGTGCATTCACCGCCCCATTCGCGGCCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcct < 2:194545/149‑1 (MQ=255) cccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa < 1:259663/113‑1 (MQ=18) cccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGa > 2:259663/1‑113 (MQ=18) cccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 1:2522588/1‑150 (MQ=37) cccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctg > 2:3514836/1‑150 (MQ=255) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:6772150/1‑150 (MQ=37) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:4866054/1‑150 (MQ=37) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTGGAATCGAGGTTTTGACAGGTAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3453909/1‑150 (MQ=25) ccGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAG‑GATCTCGACTTGCCTCGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 1:7447857/1‑150 (MQ=14) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:5152724/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:148976/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:7129994/1‑150 (MQ=255) ccGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCcctggcctgg > 2:3863224/1‑150 (MQ=255) cgcgAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGa > 2:7158183/1‑150 (MQ=255) gcgAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:4495453/1‑150 (MQ=255) gcgAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 1:5035746/1‑150 (MQ=255) gcgAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGaa > 2:4192650/1‑150 (MQ=255) aaTACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTg > 1:3573049/1‑106 (MQ=255) tACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCg > 1:6683105/1‑150 (MQ=255) gcggcggtgaATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGc > 1:5636406/6‑150 (MQ=38) cGATGGTGTATTCACCGCCGCATTCGCGGGAAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGcc < 2:1766521/150‑1 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 1:6154679/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:222996/1‑150 (MQ=255) gATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGccc > 2:222514/1‑150 (MQ=255) aTGGTGTATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCa < 2:3033474/150‑1 (MQ=255) aTGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCa > 1:285249/1‑150 (MQ=255) gggtggATTCCCCGCCGCATGCGGGGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAg < 2:229263/149‑1 (MQ=255) gtggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGa > 2:1799787/1‑150 (MQ=255) gggATTCACCGCCGCTTGCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAc < 2:7021890/149‑1 (MQ=255) ggATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGAcc > 1:5130231/1‑150 (MQ=255) aTTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCa > 2:2169077/1‑150 (MQ=255) | GCGTGATGCTGAAGTCATCGCTGCTGCCGACGAGGCCGGCATCGCGATGGTCTTCACTGGCATGCGCCACTTCCGCCACTAATTACGCGGATCCCGAGGCAAGTCGAGATC‑CTGTGGGAGC‑GGGCTTGCCCGCGAATACGATGGTGGATTCACCGCCGCATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTTGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACG > NC_002947/5490010‑5490308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |