| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,739,101 | C→T | 6.7% | intergenic (‑122/+35) | proY ← / ← hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,739,101 | 0 | C | T | 6.7% | 793.4 / 30.8 | 254 | intergenic (‑122/+35) | proY/hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): ref base C (139/98); new base T (4/13); total (143/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.32e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 262 total aligned reads displayed.
CGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCG > NC_002947/5738952‑5739248 | cgcTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgc > 1:6026012‑M2/1‑148 (MQ=255) gagaCCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcg < 2:4870610‑M2/150‑8 (MQ=255) gagaCCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcg < 2:7170113‑M2/150‑8 (MQ=255) gaCCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaa > 2:4319430‑M2/1‑141 (MQ=255) acgttGAGCTTGTTGCATGTCACTTCCTTGATTTGTTTTTGTGGTCGTGTGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTAATTCTGTGGGAGCGGGCGCGCCCGCGAAg < 2:6926318/147‑1 (MQ=39) cTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggg < 2:5256755‑M2/150‑13 (MQ=255) cTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCAAGCCCCCACCCCCACGGGATTGTGTTTTGAGCCAAAATAAGTGGGAGCGGGCGCGCCCCCCAAggg > 1:1015143/1‑150 (MQ=255) cTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCAACCCCCCGACCACACGGGAAGTTGTTTTTCAACAACATAGGTTGGAGCGGGCGCGCCCCCGAAagg > 1:3153654/1‑150 (MQ=255) ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgc > 2:3408693/1‑150 (MQ=255) cTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGccc > 2:238075/1‑150 (MQ=255) gTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGGGTTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCa < 2:2373673/150‑1 (MQ=255) tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGTTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCGCCCGCTCCCCCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAg < 2:4381964/150‑1 (MQ=255) tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCGCGCCCACCGGGGATGGTGGTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAg > 2:1893706/1‑150 (MQ=255) aCGTCCTTTATTGTTTTTTGTGGTGGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACTGGGGATGGTGTTTTGCACCTACTTCGGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAggg < 2:6880229/150‑1 (MQ=255) tCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCACGGGCg > 2:3998897/1‑150 (MQ=255) tCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCAAGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCGGTGGGAGCGGGCGCGCCCCCGAACGGCCGCCCAGCGGCCCCAGGGGCg > 2:5116212/1‑150 (MQ=255) ccTTTATTTTTTTTTGGGGTGGTGAGTTTCTGGGGGCTGCTGCGCCGCCCCTTCGCGGGCACGCCCGCTCCCACTGGGGTTGGTGTTTTGCACCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGt < 1:6663784/150‑1 (MQ=255) ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCTCCCACAGGGGATGGTGTTTTGGACCTACGTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCCCCCACCGGCCCCAGGGGCGGTa > 1:7330346/1‑150 (MQ=255) ttGAATTGTTTTAGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCCCCCCCACACCGGAAGGTGTTTTTCACCAACATCTGTGGGCGCGGGCCCCCCCCCCCAGGGCCCCCCCCCCGCCCCCCGGGCGGTa > 1:6868427/1‑150 (MQ=255) gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa < 2:4680513/150‑1 (MQ=255) gAATTGTTTTTGGGGGCGGGATATTCCGGGGGCTGCTGCGCCGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGCTGGTGTTTGGCACCTACTCCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa < 2:882762/150‑1 (MQ=255) gAATTGTTTTGGTGGGCGTGTGATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACa < 2:3873393/150‑1 (MQ=255) ttGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAAGGTGTTTTGCACCTACATCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGc > 2:4564083/1‑150 (MQ=255) tGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCt > 2:3062213/1‑150 (MQ=255) ttttGTGTTCGTGAGATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCAAAGGGTTTGGTTTTTTGCACCTACTTCTGTGGTAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg < 2:3221803/150‑1 (MQ=255) ttttGGGGGCGTGCGTTTCAGGGGGCGGCGGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTTGGTGTTTTGCACCTACTACTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg < 2:2514424/150‑1 (MQ=255) ttgggggTCGTGAGAGTCCGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCACCGGGGATGGTTTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGc < 2:1579874/145‑1 (MQ=255) gtgGTCGTGAGATTCTGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGt < 1:5514369/150‑1 (MQ=255) ggagaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGGTGGTGTTTTGCACCGACGGCGGTGGGGGCGGGCGCGCCCCCGGAGGGCCGCCCCGCGGCCCCAGGGGGGTTAGAGGCGTGGCCGTGCACccg > 1:3530225/2‑150 (MQ=37) ataTTCTGGGGGTTGCTGGGCAGCCCCTGCGGGGGCACGCCCGCTCCCCCCGGTGTTGGTTTTTGCCCCCTACTTCTGGGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccgcc < 1:3808087/148‑1 (MQ=255) tCAGGGGGCGGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCCCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgca < 2:5922681/150‑1 (MQ=255) ctgggggCTGCTGCGCACCCCCTTCGGGGGCACGCCCGCACCCACTGGGGTTGGTTTTTTGCACCTACTTCTGTGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcag < 1:2000979/148‑1 (MQ=255) ggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGc < 2:5471022/150‑1 (MQ=255) tgctgcGCAGCCCCTTCGCGGGGACCCCCGCTCCCCCAGGGGGTGGGGGTTTTCACCTACGTCTGTGGGGGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGGTAAAGGCGTGGCAGTACACCCCCCGGCagccagcccg > 1:4920542/1‑148 (MQ=255) tgctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCTGGTGGTTTGCCCCGGCGTCTGTGGGGGCGGGCGCGCCCGCGAAGGGCCCCCCCGCGGCCCCCGGGGCGGTACAGGCTTGGCAGTACACCCCCCGGCACCAAGcccg > 2:788548/1‑148 (MQ=255) gctgcGCAGCCCCTTCGCGGGCTCGCCCGCTCCCCCAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGt < 2:6052281/150‑1 (MQ=255) ctgcGCAGCCCCTTCGCGGGCCCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACGTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTc > 2:6978498/1‑150 (MQ=255) ggcgcAGCCCCTGCGCGGGCCCGCCCGCACCCCCAGGGTATGGTGTTTGGCACCTACTTCTGTGGGAGGGGCCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa < 1:6406082/149‑1 (MQ=255) gcgcAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAg < 2:6654192/150‑1 (MQ=255) gcAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGGTTTGCCCCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGGTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGAc > 2:6613486/1‑150 (MQ=255) gcAGCCCCTTCGCGGGCACGCCCGCGCCCCCAGGGGCTGGTGGTTTGCACCGACTTCGGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCCCCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGAc > 2:5112370/1‑150 (MQ=255) cccccTGCGCGGGCACGCCGGCGCCCCCCGGGTATGGTGTTTTGCCCCTACTTCTGGGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAc < 1:4992096/149‑1 (MQ=255) ggagcgGGCGTGCCCGCTCCCACAGGGGGTGGTGTTTTGCACCTACGTCGGGGGGGGCGGGCGCGCCCGCGAAGGGCCGCCCCGCGGCCCCAGGGGCGGGACAGGCGTGGCCCTACACCCGCCCGCCGCAAGCCGGGCAGACTAcccagg > 1:5440043/4‑147 (MQ=255) gcgcgGGCAGGCCGGGTCCCCGTGGGGTTGTTTTTTTGCACTTACTTGTGGGGGGGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg < 1:6238910/149‑1 (MQ=255) ggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAAc > 1:1474544/1‑150 (MQ=255) gCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa > 1:7109769/1‑150 (MQ=255) aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAgg > 1:939906/1‑150 (MQ=255) ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaacaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggct < 2:7436811‑M2/150‑100 (MQ=255) ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCa > 1:727024/1‑150 (MQ=255) gCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaa < 1:4485915‑M2/150‑102 (MQ=255) tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagt < 1:2428277‑M2/150‑104 (MQ=255) tCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGTgcccgcgacggggctgcgcagcagccccctgaatctcacgaccacaaaaacaagtccaggacgtgacatgcaacaagctcaaggtcgcaagcgcgggcgcagt < 2:4506664‑M2/150‑104 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgc < 1:4731945‑M2/150‑106 (MQ=255) ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACCGGCTTGGCAGTACACCCGCCGGCCGCACGCCGGGCAGACTACCCTTGGCCCCCAGGTCCACGGccg > 2:5670734/1‑149 (MQ=255) acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgccc < 1:2376803‑M2/150‑108 (MQ=255) acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt > 2:6179375/1‑150 (MQ=255) caGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt < 2:2141278/150‑1 (MQ=255) caGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt > 2:3834475/1‑150 (MQ=255) cggggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc < 2:5337741/149‑1 (MQ=255) aGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc > 1:3607864/1‑150 (MQ=255) ggggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCg > 1:6201572/1‑150 (MQ=255) gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGa > 2:6094332/1‑150 (MQ=255) gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGa > 1:3645205/1‑150 (MQ=255) ggtGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGata > 1:5331515/3‑150 (MQ=255) gATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGata < 1:1198673/150‑1 (MQ=255) aTGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGatat > 2:5934804/1‑150 (MQ=255) tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATc > 1:2724954/1‑150 (MQ=255) tGGTGTTTCGCACCTACTCCGGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATc < 1:5391159/150‑1 (MQ=255) ggTTTTTTGCACTTAGTTCTGTGGGTGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATcc < 1:2763939/150‑1 (MQ=255) ttttGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGAACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcg > 2:2755665/1‑150 (MQ=255) tttGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGgcgc < 2:3607864/150‑1 (MQ=255) aCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCgaaga > 2:4589474/1‑150 (MQ=255) catccccTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGaaa > 1:426826/7‑150 (MQ=255) cTACTTCTGTGGGAGCGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccct < 2:5706204‑M2/150‑129 (MQ=255) aCTTCTGTGGGAGCGGGCGTgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctc < 1:1943584‑M2/150‑131 (MQ=255) aCTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctc < 2:1067691‑M2/150‑131 (MQ=255) aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGTGCGAAGAAacg > 1:1620260/1‑150 (MQ=255) ttCTGTGGGAGCGGGCGCgcccgcgaaggggatgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacaaccgtttcatggccctcgg < 1:2950792‑M2/150‑133 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt > 2:3729526/1‑150 (MQ=255) ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt > 1:2054539/1‑150 (MQ=255) tacTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt < 1:3062213/148‑1 (MQ=255) tgtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt < 2:5243882/123‑1 (MQ=255) tgtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt > 1:5243882/1‑123 (MQ=255) cccttcgcgggcaCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctcc < 2:6791314‑M2/144‑137 (MQ=255) tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 1:2423803/1‑150 (MQ=255) tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 2:3720494/1‑150 (MQ=255) ccttcgcgggcACgcccgctaaggggctgcgcagcagccccctgaatctcacgaccaccacaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctccg < 1:1576932‑M2/145‑138 (MQ=255) ccttcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacgg > 1:4899762/6‑150 (MQ=255) gggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACGACCCTTGGCCACCAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggt > 2:3967548/1‑150 (MQ=255) ttcgctgGCACgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtt > 1:5926833‑M2/4‑11 (MQ=255) ttcgcggGCACgcccgctaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctccgcc < 1:3226132‑M2/147‑140 (MQ=255) ttcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTCGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc > 2:2823091/4‑150 (MQ=255) ggAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgattcatggccctcggctccgcc < 2:1036800‑M2/150‑140 (MQ=255) ggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc < 2:6868427/150‑1 (MQ=255) ggAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacggtc > 2:1939111/1‑150 (MQ=255) gAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCg > 2:4433951/1‑150 (MQ=255) aGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCATTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGt > 2:4111502/1‑150 (MQ=255) gCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTa < 1:3933734/150‑1 (MQ=255) gCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTa > 2:1415913/1‑150 (MQ=255) ggCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTg > 1:1705040/1‑150 (MQ=255) | CGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCG > NC_002947/5738952‑5739248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |