| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,745,462 | G→A | 15.3% | intergenic (+22/+49) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,745,462 | 0 | G | A | 15.3% | 261.1 / 32.9 | 113 | intergenic (+22/+49) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (16/76); new base A (5/10); total (21/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.03e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5745313‑5745611 | ccGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAg < 1:6538327/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 2:896033/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:5648685/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:3216679/150‑1 (MQ=255) gCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGCGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTc < 1:4112739/150‑1 (MQ=255) cGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcg < 2:1106148/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 1:1539463/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 1:1539450/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 2:701905/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgc < 1:4985659/150‑1 (MQ=255) gATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGGTTCAGcccatagc > 2:1185034/1‑145 (MQ=255) aTCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCTGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgcg < 1:5972708/150‑1 (MQ=255) tCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTcgcgg < 1:945791/150‑2 (MQ=255) cGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTg < 2:6532363/150‑1 (MQ=255) cGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTg < 1:7358759/150‑1 (MQ=255) gCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑c < 2:7260826/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 2:641765/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 1:2961760/150‑1 (MQ=255) cAGGCGCGCGCTGAGCCGGAGACTCGGCAATGGGTGGCGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 1:6855015/150‑1 (MQ=255) aGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttg > 1:2215611/1‑147 (MQ=255) ggTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttgc < 2:1462536/150‑5 (MQ=255) ggTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttgc < 2:1462370/150‑5 (MQ=255) tGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGccc < 1:3641137/150‑1 (MQ=255) tGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑cttgcac < 2:692375/150‑7 (MQ=255) ggcgcGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttgcac < 1:7448903/149‑7 (MQ=255) cgcgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCcgc < 1:5841508/150‑1 (MQ=255) cgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGa < 1:2324564/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑CTTGCACGCGaa < 2:2215611/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGaa < 2:4833243/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAg < 1:1791306/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑CTTGCACGCGAAg < 2:5448235/150‑1 (MQ=255) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAg < 1:2414192/150‑1 (MQ=39) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAggg < 1:4281799/150‑1 (MQ=255) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAggg < 2:4556145/150‑1 (MQ=39) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGt < 1:5649287/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAgggc < 2:66003/150‑2 (MQ=39) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAgggc < 2:65829/150‑2 (MQ=39) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGtt < 2:6661334/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGtt < 2:6270027/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGtt < 1:2816268/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAgggct < 1:5504430/150‑3 (MQ=38) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAgggct < 2:803390/150‑3 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTg < 1:133898/150‑1 (MQ=255) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTg < 1:4481958/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgc < 1:5294044/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgc < 1:5562127/150‑1 (MQ=255) gttactGGGCAATGGGTGGTGCGCCAGGGGCGTCATGCCCAGGAAGATGATTGCGGGCGGTCGTTTGGCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGTTTGCGTTGCAGCCCTTCGCGTG‑CTAGCCCGCGAAGGGTTgcaa < 2:341741/145‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgcaa < 1:4895345/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgcaa < 2:7209195/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgcaa < 2:2196913/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgcaac < 2:381707/150‑1 (MQ=255) tGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTgcaacgcaa < 2:4275021/150‑1 (MQ=255) tgCGCCTGGGGCGGCATGCCCAGGAAGATGAACGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCa < 2:7338831/150‑1 (MQ=255) gcgcCTGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CACGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAg < 2:581565/150‑1 (MQ=255) gcgcCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGGGGTGCAGCCCCACGCGGGCCACCCCCCCAAACGGTTGCACCCCAACCCCaaaaacaaaa > 2:2291974/1‑145 (MQ=255) gggCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAgg > 2:1656011/1‑116 (MQ=255) cggctggCCCAGGAAGATGAATGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:7365954/144‑1 (MQ=255) cggcATGCCCAGGATGATGAAAGCGGGGGGGCTTTTGCCACGGTGTTGCGCAAGCTTTTGGGCTGTGCGTACCGGGGTTGCGTGGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:5100430/150‑1 (MQ=255) cggcATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCACGGTGTGGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:2976999/150‑1 (MQ=255) cggcATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:7342686/150‑1 (MQ=255) ccAGGAAGATGAAAGCGGGGGGGCGTTTGCCTAGGTGTTGCGCCAGCTTTTGGGCGGTGCGTACCGGGGTTGCGTTGCACCCCTTCGCGTG‑AAACCCCGCGATGGTTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 1:4314406/150‑1 (MQ=255) catggAATATCACAGGGGGGGGGGTTTTGCCACGGGGTGGCGCCCGCTTTGGGGCTGAGCGTACGGGGGTTGCGTTCCCCCCCTTGGCGTG‑AACGCCCGCGACGGGTGGAACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:1955694/147‑1 (MQ=255) gacgaggAACGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCTTTGCAGCCCTTCGCGTG‑CAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGAt < 2:2909879/144‑1 (MQ=255) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa > 1:6783261/1‑90 (MQ=255) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 2:6783261/90‑1 (MQ=255) aaGATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCCTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATc < 1:745171/150‑1 (MQ=255) gATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAGGGCTg > 2:7168662/1‑102 (MQ=25) gATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACGCGAAGGGCTg < 1:7168662/102‑1 (MQ=25) cgAACGCGGGCGGGCGTTTGCCACGGTGTTGCGCCCGCTTTGGGGCTGCGCGTACGGGGGTGGCGTGGCCGCCCTTCGCGTG‑CAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:442482/149‑1 (MQ=255) gAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTGGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAcg < 2:7235943/150‑1 (MQ=255) ggggggTTGGCCATGGTGTTGCGCCTGCTTTTGGGCTGTGGGTACCGGGGTTGCGTTGCAGCCCTTCGGGTG‑CACGCCCGCGAGGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGa < 1:5517817/149‑1 (MQ=255) aaGGTGTTGCGCCCGCTTTGGGGCTGCGCGGCCCGGGGTTGCGTGGCAGCCCGTCGCGCG‑CACGCCCGCTAAGGTGTGCACCGCAACCCCACACAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTgg < 2:4051918/150‑1 (MQ=255) cggTGTTGCGCCAGCTTTGGGGCTGAGCGTACGGGGGTTGCGTTGCTGCCCTTCGCGTG‑CACGCCCGCGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGgt < 1:5552975/149‑1 (MQ=255) gtggcgcCTGTTTTTGGGGTGCGGGTCCGGGGGTTGGTTTGCCCCCTTGCGGGTG‑CCCGCCGGCTATGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 1:6517468/147‑1 (MQ=255) gcgcCCGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCTAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAc < 2:475725/150‑1 (MQ=255) gcgcCAGCTTTTGGGCTGCGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAc < 2:5469806/150‑1 (MQ=255) gcgcCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CACGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAc < 2:475357/150‑1 (MQ=255) tttGGGCTTAGCGTCCGGGGTTTGCGTTCAACCCCTTCGCGTC‑CAAGCCCCCGAAGGGTTCAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCtgatgc < 2:4668444/150‑1 (MQ=255) tggggCGGCGCGTCCGGGGGTTGGGTTGCCGCCCTGCGGGGG‑CACGCCCGCGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 1:2269079/148‑1 (MQ=255) gttACGGGGTTTGGGTTTAAGCCCTTCGGGTC‑CACGCCCGTGATGTGTTTCAACGAAACCACAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACTCCCGCAAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCACTGGa < 1:2961228/148‑1 (MQ=255) cgggggTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:7445050/148‑1 (MQ=255) gggggTTGCGGTGCCGCCCTGCGGGCC‑CACCCCCGCGCTGGGTTCCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 1:6529094/149‑1 (MQ=255) cGGGGTTGGGTGGCCGCCCTTCGCGTG‑CACGCCCGCGATGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 1:1168655/150‑1 (MQ=255) gggTGGCGTTGCCGCCCGGCGCGTG‑CACGCCCGCGCGGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAgg < 1:1723907/150‑1 (MQ=255) gttgcgtggcCGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGtt < 2:5677534/150‑1 (MQ=255) ttgcgttgcAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 1:4737705/1‑150 (MQ=255) ttgcgttgcAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 1:3056362/1‑150 (MQ=255) ttgcgttgcAACCCTTCGCGGG‑CTTGCACGCGAAGGGCTGCAACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 2:448715/1‑150 (MQ=37) gcgtggcAGCCGTTCGCGTG‑CAACCCCGCGACGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 1:4777136/150‑1 (MQ=255) ttgcAACCCTTCGCGGG‑CTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 2:1866979/1‑150 (MQ=38) ttgcAACCCTTCGCGGG‑CTTGCACGCGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:1214970/1‑150 (MQ=38) gcAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 1:2848756/1‑150 (MQ=255) gcAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:4724511/1‑150 (MQ=255) gcAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:4724775/1‑150 (MQ=255) cAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc > 2:4358082/1‑150 (MQ=255) cAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACGCCGTGCATTTTTACATATTGGGGGTCGGGAGCCCCCCAGATCCAGCGGCGGGTGTCAAAACCCAGCGGCCGCGCCCGGGCCCGCAGGTTCTCACGCTc > 2:4358068/1‑150 (MQ=255) aGCCCTTCGCTTG‑CACGCCCGCGATGGGTTTCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc < 1:1073432/150‑1 (MQ=255) aGCCCTTCGCGAG‑CAAGCCCGCCAACGGTGGCAACGCACCCCCAAAAAACTCAGTGCATCTTTACTATTTGCTGAACGGACGCACGCCAGATCAAGCGGCTGGTGTCATACCCCGGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:1845827/1‑150 (MQ=255) gCCTTTCGCGTG‑AAAGCCCGCTTTGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc < 1:4784896/150‑1 (MQ=255) gCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:7221081/1‑150 (MQ=255) | CCGGTGGCGATCGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCGCGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCC > NC_002947/5745313‑5745611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |