| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,745,472 | T→G | 31.6% | intergenic (+32/+39) | hutF → / ← PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,745,472 | 0 | T | G | 31.6% | 138.0 / 112.7 | 130 | intergenic (+32/+39) | hutF/PP_5037 | formiminoglutamate deiminase/lipocalin family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (23/62); new base G (23/17); total (48/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.03e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
CGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCG > NC_002947/5745324‑5745617 | cGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTg < 2:6532363/150‑1 (MQ=255) gCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑c < 2:7260826/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 1:2961760/150‑1 (MQ=255) cAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 2:641765/150‑1 (MQ=255) cAGGCGCGCGCTGAGCCGGAGACTCGGCAATGGGTGGCGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 1:6855015/150‑1 (MQ=255) aGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttg > 1:2215611/1‑147 (MQ=255) ggTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttgc < 2:1462370/150‑5 (MQ=255) tGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGccc < 1:3641137/150‑1 (MQ=255) ggcgcGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑cttgcac < 1:7448903/149‑7 (MQ=255) cgcgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCcg‑c < 1:5841508/150‑1 (MQ=255) cgATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGa < 1:2324564/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑CTTGCACG‑CGaa < 2:2215611/150‑1 (MQ=255) gATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGaa < 2:4833243/150‑1 (MQ=39) aTGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑CTTGCACG‑CGAAg < 2:5448235/150‑1 (MQ=255) aTGTGATGGTGAAGGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGGG‑CTTGCACG‑CGAAg < 2:6968692/150‑1 (MQ=39) gtgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAggg < 2:4556145/150‑1 (MQ=39) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGt < 1:5649287/150‑1 (MQ=255) tgATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAgggc < 2:66003/150‑2 (MQ=39) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGtt < 2:6661334/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGtt < 1:2816268/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGtt < 2:6270027/150‑1 (MQ=255) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAgggct < 1:5504430/150‑3 (MQ=38) gATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAgggct < 2:803390/150‑3 (MQ=38) aTGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTg < 1:4481958/150‑1 (MQ=255) tGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTgc < 1:5562127/150‑1 (MQ=255) ggTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGGGTTTGAGCCCAAAACGGG‑CAAACCCGCCGAAGGGtgaa > 2:1073432/1‑147 (MQ=255) gttactGGGCAATGGGTGGTGCGCCAGGGGCGTCATGCCCAGGAAGATGATTGCGGGCGGTCGTTTGGCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGTTTGCGTTGCAGCCCTTCGCGTG‑CTAGCCCG‑CGAAGGGTTgcaa < 2:341741/145‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTgcaa < 1:4895345/150‑1 (MQ=255) gTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTgcaa < 2:7209195/150‑1 (MQ=255) tGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTgcaac < 2:381707/150‑1 (MQ=255) tGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTgcaacgcaa < 2:4275021/150‑1 (MQ=255) gcgcCTGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCACGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CACGCCCG‑CGATGGGTTGCAACGCAACCCCAAAAAACTCAg < 2:581565/150‑1 (MQ=255) gcgcCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGGGGTGCAGCCCCACGCGGGCCACCCCCC‑CAAACGGTTGCACCCCAACCCCaaaaacaaaa > 2:2291974/1‑145 (MQ=255) gggCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAgg < 1:1656011/116‑1 (MQ=255) gggCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAgg > 2:1656011/1‑116 (MQ=255) cggctggCCCAGGAAGATGAATGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:7365954/144‑1 (MQ=255) cggcATGCCCAGGATGATGAAAGCGGGGGGGCTTTTGCCACGGTGTTGCGCAAGCTTTTGGGCTGTGCGTACCGGGGTTGCGTGGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:5100430/150‑1 (MQ=255) cggcATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCACGGTGTGGCGCCAGCTTTTGGGCTGAGCGTACGGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:2976999/150‑1 (MQ=255) cggcATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTa < 2:7342686/150‑1 (MQ=255) cccAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTTCAGCCCATAACCTG‑GAACCCCG‑CGAAAGGTTTGAACGCAAACCCAAAAAAAACAGTGCCTTTTTTATATTTg > 2:7276565/1‑150 (MQ=255) ccAGGAAGATGAAAGCGGGGGGGCGTTTGCCTAGGTGTTGCGCCAGCTTTTGGGCGGTGCGTACCGGGGTTGCGTTGCACCCCTTCGCGTG‑AAACCCCG‑CGATGGTTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 1:4314406/150‑1 (MQ=255) catggAATATCACAGGGGGGGGGGTTTTGCCACGGGGTGGCGCCCGCTTTGGGGCTGAGCGTACGGGGGTTGCGTTCCCCCCCTTGGCGTG‑AACGCCCG‑CGACGGGTGGAACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGc < 2:1955694/147‑1 (MQ=255) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa > 1:6783261/1‑90 (MQ=255) gAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑Caa < 2:6783261/90‑1 (MQ=255) aaGATGAAAGCGGGCGGGCGTTTGCCATGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCCTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATc < 1:745171/150‑1 (MQ=255) gATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAGGGCTg < 1:7168662/102‑1 (MQ=25) gATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAACCCTTCGCGGG‑CTTGCACG‑CGAAGGGCTg > 2:7168662/1‑102 (MQ=25) tGAACGGGGGGGGGGGTTGGCCTTGGTGTTGCGCCCGCTTTTGGGCTGTGGGTACGGGGGTTGGGTTGCCGCCCTTCGCGTG‑CACGCCCG‑CGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 1:2443133/150‑1 (MQ=255) cgAACGCGGGCGGGCGTTTGCCACGGTGTTGCGCCCGCTTTGGGGCTGCGCGTACGGGGGTGGCGTGGCCGCCCTTCGCGTG‑CAAGCCCG‑CGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGAc < 2:442482/149‑1 (MQ=255) ggggggTTGGCCATGGTGTTGCGCCTGCTTTTGGGCTGTGGGTACCGGGGTTGCGTTGCAGCCCTTCGGGTG‑CACGCCCG‑CGAGGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGa < 1:5517817/149‑1 (MQ=255) cgggcgTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGGTTACCGGGGTTGGGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGATGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGa < 1:5517768/150‑1 (MQ=255) gtggcgcCTGTTTTTGGGGTGCGGGTCCGGGGGTTGGTTTGCCCCCTTGCGGGTG‑CCCGCCGG‑CTATGGGTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCa < 1:6517468/147‑1 (MQ=255) gcgcCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CACGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATAc < 2:475357/150‑1 (MQ=255) tgtttttGGGCTTCGCTTCCGGGGGTTGGGTTGCCCCCGTGCGCGTC‑CACGCCCG‑CCATGGGTTCAACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCctg < 1:6966527/147‑1 (MQ=255) tggggCGGCGCGTCCGGGGGTTGGGTTGCCGCCCTGCGGGGG‑CACGCCCG‑CGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGcc < 1:2269079/148‑1 (MQ=255) gttACGGGGTTTGGGTTTAAGCCCTTCGGGTC‑CACGCCCG‑TGATGTGTTTCAACGAAACCACAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACTCCCGCAAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCACTGGa < 1:2961228/148‑1 (MQ=255) tACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CACGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAca < 2:4284155/150‑1 (MQ=255) cgggggTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagc < 1:7445050/148‑1 (MQ=255) cGGGGTTGGGTGGCCGCCCTTCGCGTG‑CACGCCCG‑CGATGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 1:1168655/150‑1 (MQ=255) cGGGGTTGCGTGGCAGCCCTTCGCGTG‑CACGCCCG‑CGACGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGAcagca < 2:2631901/150‑1 (MQ=255) gggTGGCGTTGCCGCCCGGCGCGTG‑CACGCCCG‑CGCGGGGTTGCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAgg < 1:1723907/150‑1 (MQ=255) gttgcgtggcCGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGtt < 2:5677534/150‑1 (MQ=255) ttgcgttgcAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 1:3056362/1‑150 (MQ=255) ttgcgttgcAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 1:4737705/1‑150 (MQ=255) ttgcgttgcAACCCTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtc > 2:448715/1‑150 (MQ=37) gcgtggcAGCCGTTCGCGTG‑CAACCCCG‑CGACGGTTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTtctc < 1:4777136/150‑1 (MQ=255) gttgcAACCCTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCGAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCAc > 2:5297752/1‑150 (MQ=38) ttgcAACCCTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACg > 1:1214970/1‑150 (MQ=38) gcAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:4724511/1‑150 (MQ=255) gcAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 2:4724775/1‑150 (MQ=255) gcAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCt > 1:2848756/1‑150 (MQ=255) ccccccTTCGCGAC‑CCCGCCGG‑CGCCGGGTTCCACCGCAACCCCAAAAAACTCAGGGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTc < 1:2618565/147‑1 (MQ=255) cAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACGCCGTGCATTTTTACATATTGGGGGTCGGGAGCCCCCCAGATCCAGCGGCGGGTGTCAAAACCCAGCGGCCGCGCCCGGGCCCGCAGGTTCTCACGCTc > 2:4358068/1‑150 (MQ=255) aacccTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAGCCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:1912968/3‑150 (MQ=38) aacccTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:6854564/3‑150 (MQ=38) aGCCCTTCGCTTG‑CACGCCCG‑CGATGGGTTTCACCGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc < 1:1073432/150‑1 (MQ=255) aGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 1:3636746/1‑150 (MQ=255) aGCCCTTCGCGAG‑CAAGCCCG‑CCAACGGTGGCAACGCACCCCCAAAAAACTCAGTGCATCTTTACTATTTGCTGAACGGACGCACGCCAGATCAAGCGGCTGGTGTCATACCCCGGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTcc > 2:1845827/1‑150 (MQ=255) gCCTTTCGCGTG‑AAAGCCCG‑CTTTGGTTTGAAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc < 1:4784896/150‑1 (MQ=255) gCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:7221081/1‑150 (MQ=255) gCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 2:184530/1‑150 (MQ=255) acccTTCGCGGA‑CTTGCACG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTccc > 1:1542606/2‑150 (MQ=255) cccTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCa > 2:4283265/1‑150 (MQ=255) cccTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCAGGACAGCAGGTTCTCACGCTCCCa > 2:5399674/1‑150 (MQ=255) ccTTCGCGGG‑CTTGCACG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAg > 2:6051214/1‑150 (MQ=255) cTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:6513898/1‑150 (MQ=255) cTTCGCGGG‑CTTGCACG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:791659/1‑150 (MQ=255) cTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:5624016/1‑150 (MQ=39) cTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 2:1871474/1‑150 (MQ=39) cTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:2511727/1‑150 (MQ=39) cTTCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGACCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAgg > 1:1310224/1‑150 (MQ=39) ttCGCGGG‑CTTGCACG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCAGTGTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:6500739/1‑150 (MQ=255) ttCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:5093851/1‑150 (MQ=39) ttCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGc > 2:5153176/1‑150 (MQ=39) tgcgcgTC‑CACGCCCG‑CTATGGGTTCCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCGGGTTCTCACGCTCCCAGGc < 1:4486603/148‑1 (MQ=255) tCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:1075686/1‑150 (MQ=255) tCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:724079/1‑150 (MQ=255) tCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 1:6935540/1‑150 (MQ=255) tCGCGGG‑CTTGCACG‑CGAAGGGCTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGcc > 2:6296455/1‑150 (MQ=39) cgcgTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCg > 2:1968105/1‑150 (MQ=255) | CGCCAGGTGCGCGATGTGATGGTGAATGGGCAATGGGTGGTGCGCCAGGGGCGGCATGCCCAGGAAGATGAAAGCGGGCGGGCGTTTGCCAAGGTGTTGCGCCAGCTTTTGGGCTGAGCGTACCGGGGTTGCGTTGCAGCCCTTCGCGTG‑CAAGCCCG‑CGAAGGGTTGCAACGCAACCCCAAAAAACTCAGTGCATTTTTACTATTTGCTGATCGGACGCCCGCCAGATCAAGCGGCTGGTGTCATACCCCTGCTGCCGCGCCCTGGACAGCAGGTTCTCACGCTCCCAGGCCG > NC_002947/5745324‑5745617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |