| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 383,420 | A→G | 6.0% | intergenic (+77/‑106) | PP_0319 → / → PP_0320 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 383,420 | 0 | A | G | 6.0% | 791.6 / 22.3 | 247 | intergenic (+77/‑106) | PP_0319/PP_0320 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base A (97/134); new base G (6/9); total (104/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 248 total aligned reads displayed.
CCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAG > NC_002947/383274‑383569 | ccTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaac > 2:7213776‑M2/1‑147 (MQ=255)ccTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaac > 1:3248556‑M2/1‑147 (MQ=255) ttGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCACATTCGCGGGTAaaccc < 2:1912163‑M2/150‑6 (MQ=255) gcgAACTCAAGCGCAGATCGCCGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATCAGCCCCGTCCACCGTCCCCCCGTAGGAGCGGGTTCCCCCGCGAATGCGTCCGTGGCTTCAACACCGCATTCGCGGGTAaacccgctc > 2:4311460‑M2/1‑141 (MQ=255) gcgAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTAACCCGCGAATGCGTCAGTGGCTTCAAAACCGCATTAGCGGGGAaacccgcgc < 1:814306‑M2/150‑10 (MQ=255) aCTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctac < 2:2365770‑M2/150‑14 (MQ=255) tCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCCTTCGCGGGTAAACCCGCTCCTACAg > 1:3003404/1‑150 (MQ=255) tCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAg > 2:579158/1‑150 (MQ=255) gcgcAGATCGACGCCGCGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTg > 2:6549476/1‑150 (MQ=255) aTCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTg > 2:703851/1‑150 (MQ=255) aTCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCACTGGCTTCAAAACCGCAATCGCGGGTAAACCCCCTCCGAAAGGGTGCAtagg > 1:6329248/1‑147 (MQ=255) tCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa < 1:1276146/150‑1 (MQ=255) gACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGAtt < 1:7117982/150‑1 (MQ=255) gACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTAACCCGCGCAAGCGGGAGTGGCTTAAAAAACGCATTAGCGGGGAAAACCCCACCAACACGGTGCAACAGAtt > 1:1849446/1‑150 (MQ=255) ccACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCtt < 2:429477/150‑1 (MQ=255) ccACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCtt < 2:5998415/150‑1 (MQ=255) cACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTc < 2:1808811/150‑1 (MQ=255) cACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTc < 1:6219576/150‑1 (MQ=255) aCGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGGTCACCCGCCAAATCGTCACTTGCTTCAAAACCCCAATCGCGGGGAAACCCCCACCGAAAGGGTGCATCTGATTGCttga > 1:2670986/1‑148 (MQ=255) ggTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGa < 1:887132/150‑1 (MQ=255) ggTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGa < 1:4789372/150‑1 (MQ=255) gTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCAACTGATTGCGTCAGAt > 1:6536131/1‑150 (MQ=255) aTGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACt < 2:3319041/150‑1 (MQ=255) tGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg < 2:1370626/150‑1 (MQ=255) tGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg < 1:6467424/150‑1 (MQ=255) gCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTgg < 2:7328388/150‑1 (MQ=255) ccATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa < 2:1495068/150‑1 (MQ=255) aTCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGAtt > 1:6699923/1‑150 (MQ=255) tCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCTCCCGCGAATGCGTCAGTGGCTTCAACAGCGCATTCGCGGGTAATGCCGCTGCTACAGGGTGCATGTGATTGCTTGTGATCAGTGGAttt > 2:7343917/1‑149 (MQ=255) gCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTAGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg > 2:1318840/1‑150 (MQ=255) cGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTgg < 1:3680876/150‑1 (MQ=255) cGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTgg < 1:2504928/150‑1 (MQ=255) aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCATATCACTGGATTAACTGGATa > 2:3433200/1‑150 (MQ=255) aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATa < 2:6322328/150‑1 (MQ=255) cATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCGACAGGGTGCATATGATTGCTTAAGATCACTGGATTAACTGGATACg > 1:2913310/1‑150 (MQ=255) aTCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCGACAGGGTGCATCTGAATGCTTCAGATCACTGGATTAACTGGATACGc > 2:6066007/1‑150 (MQ=255) tgCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCaa < 1:6033870/149‑1 (MQ=255) gCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAg < 2:4079355/150‑1 (MQ=255) cTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAgt < 1:2179204/150‑1 (MQ=255) cAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGtata < 2:3958899/150‑1 (MQ=255) cAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGtata < 1:1667624/150‑1 (MQ=255) tAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCCAATGCGTCAGTGGCGTCAACACCCCATTCGCGGGGAAACCCGCTCCGACAGGGTGCATCTGATTGCTTCAGATAACTGGATTAACTGGATACGCAAGTGTATacac > 1:4123401/1‑150 (MQ=39) ccccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTGAACCCGCGGCTACAGGGTGCATCTGATTGGGTCAGATCAAAGGTTTAACGGGAGACGGCAGTGGATAAACTTTc > 1:5809615/1‑150 (MQ=21) gTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCa > 2:6977003/1‑150 (MQ=255) cGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTCAACCCGCTCCGACAGGGTGCCTCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACATTCCGCAAAAcca > 2:6245819/1‑148 (MQ=255) gTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaat < 2:2966558/150‑1 (MQ=255) tCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaata < 1:6894194/150‑1 (MQ=255) ccccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaataata < 1:995189/150‑2 (MQ=255) cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAtgt > 1:3591021/1‑150 (MQ=255) cccGTAGGAGCGGGTTCACCCGCGAATGCGCCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAtgt > 2:6856607/1‑150 (MQ=255) cGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGc < 2:6425400/150‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCgg < 1:3341729/150‑1 (MQ=255) tAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCgg > 2:5450864/1‑150 (MQ=255) aGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCggg < 1:2646523/150‑1 (MQ=255) gggTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcac < 1:1019465‑M2/150‑102 (MQ=255) ggTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAgg > 2:1557690/1‑150 (MQ=255) gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagg < 1:5057843‑M2/150‑104 (MQ=255) gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAggg > 2:2280654/1‑150 (MQ=255) ttCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAgggg > 2:5600386/1‑150 (MQ=255) ttCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGGGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAgggg > 2:6596181/1‑150 (MQ=255) cACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTg > 2:3695806/1‑63 (MQ=255) aCCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAAc > 1:1340257/1‑92 (MQ=255) aCCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGAGACGCAAGTGTATACACTTTCCGCAAAACAATACTGTGCGGGGAGTAGGGGCAt < 2:5146255/150‑1 (MQ=255) cccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATg < 2:1696982/150‑1 (MQ=255) ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTGaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc < 2:6479331‑M2/150‑110 (MQ=255) ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagt < 1:3138743‑M2/134‑94 (MQ=255) ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagt > 2:3138743‑M2/1‑41 (MQ=255) ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGc > 1:2930255/1‑150 (MQ=255) ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGc > 1:1039507/1‑150 (MQ=255) cgcgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTGaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgct < 2:3790108‑M2/150‑111 (MQ=255) cgcgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCg > 1:4448767/1‑150 (MQ=255) cgcgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCg > 1:734631/1‑150 (MQ=255) gcgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTGaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctg < 2:5864522‑M2/150‑112 (MQ=255) gcgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGt > 2:3620480/1‑150 (MQ=255) cgAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTa > 1:2375108/1‑150 (MQ=255) aaTGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctgatg < 1:2638836‑M2/150‑115 (MQ=255) tGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTg > 2:2883570/1‑150 (MQ=255) tGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTg < 1:4723706/150‑1 (MQ=255) gTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg > 2:2742425/1‑73 (MQ=255) gTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCg < 1:2735217/150‑1 (MQ=255) aGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTaa > 2:4341855/1‑150 (MQ=255) aGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTaa > 1:1351289/1‑150 (MQ=255) tGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAaga < 1:6009876/150‑1 (MQ=255) tGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAGGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAaga < 2:5676905/150‑1 (MQ=255) gggCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAaga < 2:2767080/149‑1 (MQ=255) ggCTTCAACACCGCATTCGCGGGTGaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctgatgctccttctgca > 1:5864139‑M2/1‑25 (MQ=255) cTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCa > 1:2256857/1‑150 (MQ=255) ttCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCAt > 2:1272224/1‑150 (MQ=255) ttCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCAt > 1:7407871/1‑150 (MQ=255) ttCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCAt > 1:5503276/1‑150 (MQ=255) aaCACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCa > 1:7015059/1‑150 (MQ=255) aaCACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCa > 2:3878418/1‑150 (MQ=255) acacCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAg > 1:5106276/1‑150 (MQ=255) ccATTCGCCGCAAAACCCGCTCCTACAGGCAGCATCTCATTCCTTCAGATCACTGGAATAACTCCATACGCAAGTGTATACACTATCCCCAAAACAATAATCTGCGGGGAGTAGGGGCATGCGTATCTGGCGAAAGAGCATCCAGTTGCa < 2:5013681/149‑1 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAGGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTg > 1:3720793/1‑150 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGGTGCAACTGATTGATTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAATACAATATTGTGCGGGGAGTAGGGGCATGCGTATCTGGCGGAAGAGCATCCAGTTGCAATTg > 2:3001163/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGTGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCa < 1:2019743/150‑1 (MQ=255) gTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCAcc > 2:4902540/1‑150 (MQ=255) tAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCa < 1:5450864/150‑1 (MQ=255) tAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCa < 1:2303554/150‑1 (MQ=255) | CCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTTGCAATTGATCACCAG > NC_002947/383274‑383569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |