| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,875,332 | A→T | 10.1% | intergenic (+88/+46) | PP_5144 → / ← ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,875,332 | 0 | A | T | 10.1% | 398.5 / 5.8 | 140 | intergenic (+88/+46) | PP_5144/ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator |
| Reads supporting (aligned to +/- strand): ref base A (73/47); new base T (3/14); total (77/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.19e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGC > NC_002947/5875188‑5875478 | ccctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGc > 1:3254198‑M1/79‑150 (MQ=255) ctgaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgttgtctgttcgGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg > 1:5879418‑M1/77‑150 (MQ=255) cagaagaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgcgGGGCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCGAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg > 2:2944765‑M1/77‑150 (MQ=255) agaaccttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTc > 1:2090028‑M1/73‑150 (MQ=255) ttgggttggcgcggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgcgGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg > 2:3737531‑M1/67‑140 (MQ=255) ttttGGGGGGCTTTTGGGGTAATTTGTGTTGTTGGTCTTTGTATTTGTTGTTGTCTGTTCGGGCCTCTTCGGGGGTGAACCCGCTCCTCCACCGGCCTGGGTCCAACCCCA‑GAGGTGTGTAGGTGGTTGGAGGGGGTTAACCCGCGAaga < 2:2631095/150‑1 (MQ=255) ttggcgcggatgattgggcctggggctaataaaaccctgtgcgggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACCACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAaga > 2:5386344‑M1/62‑150 (MQ=255) tttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCATCGCGGGTGAAACCCCACCGAAAAACCCCAGGGTAAAAACCCA‑CAAGTGTGTTAGGGGTAGGAGCGGGTTCACCCGCCAagag > 2:2380838/1‑150 (MQ=255) gCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTAACCCCAACAACAAAGGCCAGGGTCCAACCCCA‑CATGTGTTTACGGGGGAGGAGCCGGTTAACCCCCCAAGAGGCCg > 1:2358429/1‑150 (MQ=255) cggatgattgggcctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCggg < 1:2382232‑M1/75‑1 (MQ=255) cGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCCCGCCGACCACGGCCTGGGTCCAACCCCA‑CATGTGTGTTCCGGGGAGGAGCGGGTTGACCCCCGAAGAGGCCgg > 1:4741695/1‑150 (MQ=37) cGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCCCAACAAAAACCGCCTGGGTCCAACCCCA‑CAAGTGTGTAAGTGGTAGGAGCGGGTTCACCCCCGAATAGGCCgg > 2:3147439/1‑150 (MQ=255) gggggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCCCTCCAACAACAGCCAGGGTCCAAACCCA‑GAAGTGTGTTCGTGGGAGGAGCGGGTTCAACCGCGAACATGCCCGCACAAACAg > 2:6253192/1‑150 (MQ=255) ggggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCGCGCCTACAAAGGCCAGGGTCCAAACCCC‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAga > 2:3736651/1‑149 (MQ=39) ctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg < 2:2490762‑M1/74‑1 (MQ=255) ctggggctaataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCgg > 1:2490762‑M1/43‑116 (MQ=255) aaaTTGAGTTGTTGGTCTGATTTTTTGATGTTGTCGGTTCGGGCCTCTCCGCGGGTCAACCCGCTCCTACAACGGCCTGGGTCCAACCCCT‑GATGTTTGTACGTGGTTGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCa < 2:3605669/150‑1 (MQ=38) aaTTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCGCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCCAAGAGGCCGGCACAAACAGCAacac > 2:3917662/1‑150 (MQ=255) tttGTGTTGTTGGTCTGTTTTTTTGTTGTTTTCTGTGGGGGCCTCTGCGGGGGCCACCCCGCCCCCACACGGGCGTGGGCCAACCCCCT‑TTTGTTTTAAGGTGGTAGGCGGGGTTACCCCCGCGAAGAGGCCGGCACAAACAGCATCAcc < 2:2758091/149‑1 (MQ=255) taataaaaccctgtgagggtgatgctgtttgtgccGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTa < 1:2672910‑M1/67‑1 (MQ=255) ttgttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTcaca > 2:1023343/1‑150 (MQ=255) ttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCC‑GCTGTGTGTTCGTGGTAGGACCGGGGTCACCCCCGAAGCGGCCGGCACAAACAGCAACACCCGCACAggg > 2:6574488/1‑150 (MQ=37) gttaGTATTTGATGTTGTCTGTTCGGGCCTGTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCT‑GATGTGTGTACGTGGTAGGCGGGGGTTCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTtta < 2:7356153/147‑1 (MQ=38) tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGAAACCCCTCCAACAAACGCCAGGGTCCAAACCCA‑CATTTGTGTAAGTGGTAGGGGCGGGTTCAACCGCCAAGAGGGCCGCACAAAAAGCAAAACACACACAGGGTTttat > 2:127308/1‑150 (MQ=255) ttttttttgtggtGTGTTGGGGCCTCTTGGGGGTTCAACCCGCTCCTACAACGGCGTGGGTCAAACCCAA‑TTTGTGTGTACGTGGTAGGAGGGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGc < 2:5741310/143‑1 (MQ=255) tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCGCTCCTACAACGGCCTGGGGCCCACCCCA‑GGTGTGGGGACGTGGTAGGAGCGGGTTCACCCCCGGCGAGGCCGGCCCACACAGCCTCCCCCACACCGGGTGTTATTAGccc > 2:4630274/1‑150 (MQ=25) tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCCCTCCTACAACCGCCGGGGTCCAACCCCA‑GATGTGTGTACGTGGGAGGAGCGGGTTCACCCGCGACGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGccc > 2:3666655/1‑150 (MQ=39) tgttgtCTGTTCGGGCCTCTTCGCGGGTGAACCCGCACCAACAACGGCCTGGGTCCAAACCCA‑GATGTGTGTACGTGGTATGAGCGGGTTAACCCGCGAAGAGGCCCGCACAAACAGCATCAACCAAACAGGGTTTTATTATCCCCAGGc > 2:2358665/1‑150 (MQ=37) ttgtCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTGCTTGAACGGGGTGGGTCCAACCCCA‑GTTGTGTGTTGGTGGTTGGAGCGGGTTGACCCGCGAAGAGGGCGGCAGAAACAGCATCACCCTGACAGGGTTTTTTTTGCCCCAGGgcc > 2:4256769/1‑150 (MQ=255) tCTGTTGGGGCCTCTGCGGGGGTTAACCCGCTCCTACACCGGCGTGGTTCCAACCCCT‑TTTGTGTGTCCGTGGTTGGTGGGGGTTCACCCGCGATGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAat < 2:6546720/150‑1 (MQ=255) ttCGGGCCTCTTCGCGGGTGTACCCGGTGCTACAACGGCCTGGGTGCAACCCCA‑GATGTGTGTAAGTGGTAGGAGCGGGTTGACCCGCGAAGAGGCCGGCACAAAAAGGATCAACCTGACAGGGTTTTTTTATGCCCAGGCCCAatcatc > 2:6664767/1‑150 (MQ=255) TCTTCGCGGGTGACCCCGCTCCTACACCGGCCTGGTTCAAACCCCT‑GTTGTTTTTACGTGGTATGAGCTGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCaa > 2:1448154‑M1/1‑150 (MQ=255) ggaGCGGGTTCACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAAcc < 1:5059179‑M1/147‑1 (MQ=255) TCGCGGGTGAACCCGCTCCTACACCGGCCTGGGGCCACCCCCA‑GTGGTGTGTAGGTGGTCGGCGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAAccc > 2:6130473‑M1/1‑150 (MQ=255) ggggttGAACCCGCTCCAACACGGGCCTGGGTCAAACCCCT‑GTTGTGTGTAGGTGTTCGGAGGGGGTTCCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCaa < 1:5510926/145‑1 (MQ=255) ggggttGAACCCGCTCAAAC‑ACGGGCGTGGTCCAAACCCATTTTGTGTGTCCTTGGTTGGGGGGGTTACCCCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCaa < 1:2922481/145‑1 (MQ=255) GCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCaa < 1:600858‑M1/150‑1 (MQ=255) gggttccaCCCGCCCCAACACGGGCGTGGGTCAAACCCCT‑GTTGTGTTTCGTTGTTTGGTGGGGTTTCACCGGCGACGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 1:1694102/143‑1 (MQ=255) ggggTGACCCCGCTCCTACTCGGGCGTGGGTCCAACCCAT‑GTTTTTTTTCGGGTGTTGGTGGGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 2:1063028/149‑1 (MQ=255) CGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 1:3652920‑M1/150‑1 (MQ=255) GGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg < 1:7169142‑M1/150‑1 (MQ=255) GTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGtt < 1:1554513‑M1/150‑1 (MQ=255) GTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGtt < 1:1333482‑M1/150‑1 (MQ=255) tccaCCCGCCCCTACACGGCCCTGGGCCCAACCCAA‑TTTGTTTGTAGTTGTTTGGTGGGGTTCCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttc < 1:5427960/147‑1 (MQ=255) TGAACCCGCGCCTCCACCGGCGTGGGTCCAACCCCA‑GATGTGTTTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttc > 2:7090307‑M1/1‑150 (MQ=255) aaCCCGCTCCAACACGGGCGTGGGCCCAACCCCT‑GTTGTGTGTCGTTGTTTGTCGGGGGTACACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttctt < 2:781156/150‑1 (MQ=255) AACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttctt > 2:4957001‑M1/1‑150 (MQ=255) ACCCGCTCCTACACCGGCGTGGGTCCAACCCCA‑TATGTGTGTAGGTGGTTGGCGGGTTTTAACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttcttc > 2:1982383‑M1/1‑150 (MQ=255) CCCGCTCCTACAACGGCCTGGGTCCAACCCCT‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCa > 2:2353719‑M1/1‑150 (MQ=255) CCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCa < 2:4199796‑M1/150‑1 (MQ=255) CCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCa < 2:4199819‑M1/150‑1 (MQ=255) CCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg < 1:3842887‑M1/150‑1 (MQ=255) CCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg < 1:2561687‑M1/150‑1 (MQ=255) GCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAggg < 1:3568007‑M1/150‑1 (MQ=255) GCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAggg < 1:3059156‑M1/150‑1 (MQ=255) CTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGc < 2:4880166‑M1/150‑1 (MQ=255) TCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGcc < 1:6419945‑M1/150‑1 (MQ=255) TACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttat > 1:2196108‑M1/1‑100 (MQ=255) TACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt < 2:5779114‑M1/150‑1 (MQ=255) TACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt < 2:6399915‑M1/150‑1 (MQ=255) TACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt < 2:6399919‑M1/150‑1 (MQ=255) TACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt < 2:1477039‑M1/150‑1 (MQ=255) ACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 1:4725303‑M1/150‑1 (MQ=255) ACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 2:4884092‑M1/150‑1 (MQ=255) ACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 1:6094586‑M1/150‑1 (MQ=255) ACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 2:349603‑M1/150‑1 (MQ=255) ACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 2:4370372‑M1/150‑1 (MQ=255) ACAACGGCCTGGGACCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTAACCCGCGAAGAGGCCGGCACAAACAGCATCACACTCACAGGGTTTAATTAGCCCCAGGCCCAATAATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGtt < 2:945276‑M1/150‑1 (MQ=255) aaCGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAAc < 1:434638/73‑1 (MQ=255) aaCGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAAc > 2:434638/1‑73 (MQ=255) aCGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGttcttc < 2:6102419/137‑1 (MQ=255) ggCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttatt > 2:3338219/1‑95 (MQ=255) cTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAg > 1:6539917/1‑150 (MQ=255) tGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGc > 2:2701439/1‑150 (MQ=255) tGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGc > 1:6955353/1‑150 (MQ=255) gggTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCt > 2:5882819/1‑150 (MQ=255) gTCCAACCCCC‑GATGTGTGTACGTGGTAGGAGGGGGTCCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgt < 2:3215436/150‑1 (MQ=255) tCCAACCCCA‑GTTGTGTGTACGTGGTTGGAGGGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgtg < 2:5124762/150‑1 (MQ=255) tCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgtg > 2:5428992/1‑150 (MQ=255) tCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCtgtg > 1:7117784/1‑150 (MQ=255) cAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGa > 1:1328564/1‑150 (MQ=255) ccccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg > 2:2721471/1‑50 (MQ=255) ccccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATaa > 2:1730841/1‑150 (MQ=255) ccccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATaa > 2:6839932/1‑150 (MQ=255) ccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAcc > 2:680140/1‑150 (MQ=255) ccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAAcc > 1:5746092/1‑150 (MQ=255) ccA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGATGCAGCGAGCTGTGGATAAcc > 2:855103/1‑150 (MQ=255) cA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCt > 1:1195363/1‑150 (MQ=255) tgtACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTg > 1:6789324/1‑150 (MQ=255) tgtACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTg > 1:406274/1‑150 (MQ=255) tACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTc > 1:6697644/1‑150 (MQ=255) tACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTc > 2:1229820/1‑150 (MQ=255) tACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTc > 2:1527250/1‑150 (MQ=255) cGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCAt > 2:2019671/1‑150 (MQ=255) cGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCAt > 2:1642133/1‑150 (MQ=255) gTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATg > 1:6418184/1‑150 (MQ=255) gTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATg > 1:5682323/1‑150 (MQ=255) gTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATg > 2:943994/1‑150 (MQ=255) tGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATgg < 1:4880166/150‑1 (MQ=255) ggTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGc > 2:4273251/1‑150 (MQ=255) | GAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCA‑GATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGTTGCAGCGAGCTGTGGATAACCTGCGGGTTGTCATGGC > NC_002947/5875188‑5875478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |