| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,929,596 | A→T | 7.1% | intergenic (‑161/+36) | gcvP‑II ← / ← gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,929,596 | 0 | A | T | 7.1% | 654.5 / 2.1 | 238 | intergenic (‑161/+36) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| Reads supporting (aligned to +/- strand): ref base A (108/98); new base T (3/20); total (111/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 241 total aligned reads displayed.
CTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTCAGCA > NC_002947/5929447‑5929744 | ttCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAg > 2:3775370/1‑150 (MQ=255) acgaaGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCAGTGTAgg > 2:7022016/5‑150 (MQ=255) ccTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGa < 1:3132403/150‑1 (MQ=255) ccTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGAGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACGCGTCTCGAATGCAGTGCTGTACCTGTGTAGGa < 1:6870450/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 1:4463618/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 2:7229936/150‑1 (MQ=255) tAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGc < 2:6733272/150‑1 (MQ=255) gACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCAAC‑AGGGGCTGCACCCGGCTCGCATGCCGTGCTGTACCGGTGTAGGAGCgg > 2:3998713/1‑150 (MQ=255) ggCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTa < 1:2824110/150‑1 (MQ=255) ggCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTa < 1:3760642/150‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTCC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg < 2:5217704/150‑1 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCcg > 1:4285390/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCAAA‑ACGGGCTGCACCCCGCGCGAATGCAGTGCTGTACCTGGGTAGGGGGGGCGTTATCcg > 1:6370487/1‑150 (MQ=255) tCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAACCCCACCAAC‑ACGGGCAGCACCCCTCAACAAATCAGTGCAGTAACAGTGTATGAGCGGCTTTAGCcg > 1:5110032/1‑150 (MQ=255) cATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCGAAATCCCCACCAAA‑AGGGGCTGCACCCCTCTCGAAATCAGAGCTGTAACAGTGTTGGTGCCGCTTTAGcccc > 1:7059881/1‑148 (MQ=255) tGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGGCTCGAATGCAGTGCGGTACCTGTGTAGGAGCGGCGTTAGCCGCGa > 2:5095932/1‑150 (MQ=255) ggAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGACTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGaa < 2:4957013/150‑1 (MQ=255) aaaCTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTAAAGCcgctccta < 2:5927333/150‑6 (MQ=255) aCAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCACCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAgcaagcaa > 2:3152839/1‑150 (MQ=255) tCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGa > 2:4326324/1‑120 (MQ=255) tCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCgg < 2:7435589/150‑1 (MQ=255) cTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGt > 2:3322175/1‑150 (MQ=255) tAGGATGGTATTGCCGTTTGTGCGGGGAAAATTTTTTGCTGGCCCGGCCTCTTCGCGGCAAAAGCCGCTCCTAC‑CGGGGCTGCACCCTTCTCTAATGCAGTGCTGTACCTGTGTAGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTc < 1:5531762/150‑1 (MQ=255) tAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCT‑C‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCt > 1:6135546/1‑150 (MQ=255) aGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCACTTCGCGGCTAAAGCCGCTCATAC‑AGGGGCTGCACCCTTCTCGAATGCAGTGCTTTACCTGTTTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCt < 2:5380234/150‑1 (MQ=39) ggAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCtt > 2:5311776/1‑150 (MQ=255) gatggttttGCCGATTGTGCGGGTAATCTTGTTCGCAGGCCCGGCCTCTCCGCGGCTAAAGCCGCACCTAC‑CGGGGCTGCACCCGTCTCTAATGCAGTGGTGTACGTGTTTAGTAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTa < 2:3209512/143‑1 (MQ=255) gAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCGCCAAC‑AGGGGCTGCACCCCTCTCGAAAGCAGTGCTGTACCTGTGTAGGAGCCGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTa > 2:1469032/1‑150 (MQ=255) gAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCCCTCCTAC‑AGGGGCTTCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTa > 1:4823598/1‑150 (MQ=255) ccttttGTGCGGGTAAACTTTTTTGCAGGCCGGGCCTCTTCGCGGCTAACGCCGCTCCTAC‑CGGGGCTGCACCGGTCTCTACTGAAGTGCTGTACCGGTGTAGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATc < 2:2623608/146‑1 (MQ=255) ccGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAACCAACGCGGTCTTACACGCCaaac > 2:5837193/1‑148 (MQ=255) gtgCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGGGGCTAAAGCCGCTCCTAC‑CGGGGCTGCACCCGACTCGATTGCTGGGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGcc < 1:1796726/150‑1 (MQ=38) ggtaaaCTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAACGCCGCTCCTAC‑CGGGGCTGCACCCTTCTCGAATGCAGTGCTGTACCTGTTTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTa < 2:7016040/147‑1 (MQ=39) gggAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCACGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCAGGTa > 2:5501378/1‑150 (MQ=255) ttgtttgtAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCGGGGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagcc > 2:6120568/1‑150 (MQ=255) ttGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTACTAC‑AGGGGCTGCACCCGTCTCGAAAGCAGTTCTCTAACAGGGTAGGAGAGGCTTTATACGCGAAGCAAGCAAAGCGGTCTAACTCGCCAAACACCGACGGGTacccagcc > 2:4495310/1‑150 (MQ=255) tGTTTGCAGGCCCGCCCTCTTCGCGGCTAAAGCCGCTCCACCTGGGGGCTGCACCCGTCTCGATTGCAGTGCTGTACCTGTTTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTagccagcc < 1:4230107/150‑1 (MQ=38) cAGGCCCGGCCTCTTCGCGGCTAAAGCCGCGCCGAC‑AGGGGCTGCCCCCCTCTCGCATGCCGGGCTGTACCGGGGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAACCCGGTCTTACGCGCCCAGCAGCCCCGGGTAGCCCGCCGCCTccc > 2:2804094/1‑149 (MQ=255) aGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAg < 2:6699853/150‑1 (MQ=255) aGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCGTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAg > 2:4658437/1‑150 (MQ=255) gCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCATCTCGAAAGCAGTGCTGTACCGGAGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCATACTCGCCAATCAGCGCCAGGTAGCCAGCCGCATCCAGCa > 2:1147055/1‑150 (MQ=38) ggCCTGTGCGCGGCAAACGCCGCTCCACC‑CGGGGCTGCCCCCGTCGCGATTGCTGTGCTGTACCTGTGTCGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACtt < 1:7136694/150‑1 (MQ=255) ggCCTCTTCGCGGCTAACGCCGCTCCTAC‑CGGGGCTGCACCCGTCTCGACTGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCTGCAACtt < 2:6913407/150‑1 (MQ=255) ggCCTCTTCGCGGCTAAAGCCGCTCCTAC‑CGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACtt < 2:3406712/150‑1 (MQ=255) ggCCTCTTCGCGGCTAAAGCCGCCCCTCC‑CGGGGCTGCACCCGTCTCGAATGCCGTGCGGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACtt < 2:724651/150‑1 (MQ=255) ctctTCGCGGATAAAGCCGCTCCTCC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc < 2:5126738/150‑1 (MQ=255) tatccgcgGATAAAGCCGCTCCTCC‑CGGGGCTGCACCCGTCTCGAATGCAGTGCGGTCCCTGTGTTTGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTcc < 1:7410987/146‑1 (MQ=255) gcgGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAAAGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTc > 2:368083/1‑150 (MQ=255) cTAAAGCCGCTCCTAC‑CGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGcc < 2:2523516/150‑1 (MQ=255) tAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 1:849944/1‑150 (MQ=255) tAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAAAGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCg > 1:124625/1‑150 (MQ=255) cGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGc > 1:5859255/1‑150 (MQ=255) gCTCCTCC‑CGGGGCTGCACCCGTCTCGACTGCAGTGCTGTACCTGTGTAGGCGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGTCCGGGTTGCt < 2:6232151/150‑1 (MQ=255) ctcctcC‑GGGGGCTGCACCCGTCTCGATGGCTGTGCTGTCCGTGTGTCGGCGGGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt < 1:4658101/150‑1 (MQ=255) ccTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTgg < 2:4945625/150‑1 (MQ=255) cTAC‑CGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGGGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGc < 2:123141/150‑1 (MQ=255) cTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTc > 1:1019911/1‑128 (MQ=255) tAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt > 2:2795564/1‑150 (MQ=255) tAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt < 2:6758367/150‑1 (MQ=255) tAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCt > 1:3643190/1‑150 (MQ=255) ggggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCaa > 2:862829/1‑150 (MQ=255) gggCTGCACCCGTCTCTAATGCTGTGCTGTACCTGTTTTGGTGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt < 1:2391625/150‑1 (MQ=255) gggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt > 2:6057956/1‑150 (MQ=255) gggCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAAt > 1:544355/1‑150 (MQ=255) tccACCCGTCTCGAATGCTTTGCTGTACCTGTGTCGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGa < 1:1549185/148‑1 (MQ=255) gCACCGGTCTGTATTGCTGTGCTGTACCTGTGTCGTAGGGGTTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGaa < 1:3878810/150‑1 (MQ=255) gCACCCGTCTCTAATGCAGTGCTGTACCTGTGTTGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGaa < 2:3499637/150‑1 (MQ=255) gCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGaa > 1:6595009/1‑150 (MQ=255) gCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGaa < 2:6561342/150‑1 (MQ=255) cACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAg > 2:4384096/1‑150 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCtt > 2:6506440/1‑132 (MQ=255) ccGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATc > 1:3494256/1‑150 (MQ=255) cGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATcc < 2:567873/150‑1 (MQ=255) gTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa < 2:2289553/150‑1 (MQ=255) gTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa > 1:3289947/1‑150 (MQ=255) gTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCa > 2:6335090/1‑150 (MQ=255) tcGAATGGAGTGCTGTAGCTGTGTAGGAGCGGCTTTTGGCGCGAAGCTAGGAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCGGCATCCAGCTAGTTGTCGTGGTCGGCCGGGTTGCTTGGCTTGATTTTGTAGTTCCaggt > 2:4848467/1‑147 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATc > 2:5077399/1‑96 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATc < 1:5077399/96‑1 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGa > 1:2496923/1‑150 (MQ=255) tcGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGa > 2:4775176/1‑150 (MQ=255) cGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGaa > 2:4646677/1‑150 (MQ=255) aaggCAGTGCTGTACCGGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAcc < 2:5969396/147‑1 (MQ=255) aaTGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAAcc < 2:4828683/150‑1 (MQ=255) aTGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCg > 2:4270874/1‑150 (MQ=255) tGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGt > 1:4355832/1‑150 (MQ=255) cAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTaa < 2:171463/150‑1 (MQ=255) aGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAg > 1:2947643/1‑150 (MQ=255) gTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAgg < 1:6180391/150‑1 (MQ=255) gTGCTGTACCGGTGTCGGAGCGGATTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAgg < 1:4712607/150‑1 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCa > 1:5547086/1‑88 (MQ=255) tGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCa < 2:5547086/88‑1 (MQ=255) gCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGct > 2:2055748/1‑150 (MQ=255) gTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt > 1:7321172/1‑150 (MQ=255) gTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCtt > 1:2283125/1‑150 (MQ=255) ccTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGt > 1:2743190/1‑150 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc > 2:176375/1‑150 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc > 1:1887028/1‑150 (MQ=255) tgtgTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc > 2:2842224/1‑150 (MQ=255) ggtgtAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTc < 2:5756381/149‑1 (MQ=255) | CTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTAC‑AGGGGCTGCACCCGTCTCGAATGCAGTGCTGTACCTGTGTAGGAGCGGCTTTAGCCGCGAAGCAAGCAACGCGGTCTTACTCGCCAATCAGCGCCTGGTAGCCAGCCGCATCCAGCAACTTGTCCAGCTCGGCCGGGTTGCTTGGCTTCAATTTGAAGATCCACGAACCGTAAGGCTCTTCGTTCAGCA > NC_002947/5929447‑5929744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |