| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,932,952 | C→A | 11.6% | intergenic (‑53/+100) | PP_5195 ← / ← fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,932,952 | 0 | C | A | 11.6% | 613.9 / 21.8 | 211 | intergenic (‑53/+100) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (70/111); new base A (24/5); total (94/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.08e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 222 total aligned reads displayed.
TGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCT > NC_002947/5932805‑5933101 | agcacaacagcaGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCACGGAGACCGGGAGGTACCAGCGGCGGGGGGGGGAGTGGGGCAAGGCTGAAATCACGAGTGCGATGGCGACCGCTGCGCGGTCGTGCGCCGGT‑AAACCCGCcc > 1:1690275‑M1/4‑148 (MQ=255) aGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTC < 1:5933664‑M1/150‑1 (MQ=255) gACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCT < 2:5685305‑M1/150‑1 (MQ=255) caacaGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTAC < 1:5600411‑M1/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCTACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 2:3341375/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 2:6705375/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 1:6666378/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGAGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 2:912739/150‑1 (MQ=255) cagcaCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGAc < 2:163093/150‑1 (MQ=255) caCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCCCACCTACGGGGACcgc > 2:524365/1‑150 (MQ=255) cAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAgg < 1:4537540/150‑1 (MQ=255) ggggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGGCGGGT‑AAAACCCCTCCTACGGGGCCCGCGCAAGGcc > 2:3166351/1‑149 (MQ=255) ggggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCGCGGGT‑AAAACCCCGCCGACGGGGACCGCGCCAGGcc > 1:5465308/1‑149 (MQ=255) gggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAg > 2:338861/1‑150 (MQ=255) gggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAg < 2:1657162/150‑1 (MQ=255) gcagcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTg < 2:3798587/150‑1 (MQ=255) gcagcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTg < 2:6314025/150‑1 (MQ=255) gcagcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTGGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAggg < 1:1847468/150‑3 (MQ=255) gcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAg > 1:1958102/1‑150 (MQ=255) cagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGa < 1:1397312/150‑1 (MQ=255) agcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGAt < 2:5835867/150‑1 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtcc < 2:6089596‑M1/150‑27 (MQ=255) caCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATcc < 1:7191441/150‑1 (MQ=255) caCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATcc < 2:7171683/150‑1 (MQ=255) aCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCt < 2:5005631/150‑1 (MQ=255) aCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCt < 1:5565338/150‑1 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgt > 2:3924549‑M2/1‑148 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgt > 2:1958093‑M2/1‑148 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCCGt < 1:1059874/150‑1 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGG‑AAAACCCCGCCTACGGGGCCCCCGCAACGCACTGCAgctaaagg > 2:2586808/1‑143 (MQ=255) aaGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgta > 2:4023888‑M2/1‑147 (MQ=255) aaGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgta > 2:1079468‑M2/1‑147 (MQ=255) aaGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgta > 2:2681801‑M2/1‑147 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgg < 2:4072949‑M1/150‑39 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcggg < 1:6483637‑M1/150‑40 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcggg > 2:6427994‑M2/1‑139 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcggg > 2:3399543‑M2/1‑139 (MQ=255) tCAGGGCGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtt > 1:2634781‑M2/1‑137 (MQ=255) aGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggttta > 2:4322941‑M2/1‑135 (MQ=255) aGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCGCTCCATAGGGGGCCGCGCAAGGCAGTGCAGAAAGTgtattagccggttta < 2:3928658‑M2/150‑16 (MQ=255) gggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttac > 1:5843022‑M2/1‑134 (MQ=255) gggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCGGGT‑TAACCCGCGCCAACCGGGTCCGCGCCAGGGCGTGCACATACGGGAGGAGC‑GGGgtttc > 1:3921299/1‑148 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacc > 1:338861‑M2/1‑133 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgg < 1:6781609‑M2/143‑11 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgg > 2:6781609‑M2/1‑133 (MQ=255) gagaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGGCGGGT‑AAAACCCCACCAAAGGGGACCCCCCCAGGCAGTGCATATACAgtaggagcgggtttaacc < 2:4512745‑M2/150‑19 (MQ=255) agaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccg > 2:4439174‑M2/1‑131 (MQ=255) agaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccg > 2:6409951‑M2/1‑131 (MQ=255) gggAGGTACCAGCGGCGTTGGGGGGTGTGGGGCACGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGaaa < 1:2124052/150‑1 (MQ=255) gggAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGaaa < 2:7255484/150‑1 (MQ=255) gggAGGTACCAGCGGCGGTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGaaa < 2:5636809/150‑1 (MQ=255) tACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATACTGTAGGAGC‑GGGTTTACCCGCGAAAGGGccc > 2:4839469/1‑150 (MQ=255) tACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGG‑AAACACCCGCCTAACGGGACCCCGCCAGGCCGTGCAGAAACGGTAGGAGC‑GGGGTTAACCCCCAAAGGGccc > 1:4844879/1‑150 (MQ=255) tACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCGGGG‑AAAACCCCGCCAAACGGGACCCCGCCAAGCACTGGCGATACGGGGTGTGC‑GGGTGTTACCGCGAAACGGccc > 1:2804510/1‑150 (MQ=255) cAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCGGGT‑AAAACCCCTCCAGCCGGGACCGCCCAACGCCGTGCAGAAACGGTTGGAGC‑CGGGTTAACCCCGAAATGGCCCaaa > 1:1774459/1‑150 (MQ=255) gggTTGGGGGGTGGGGGGCAAGGCTGAAATCTCGTGTGCTATGGCGACCGCTGCGGGGTGTTTGGGGGTT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCTGTGCTGTTCCTGTAGGTGC‑GGTTTTACCCGCGAAAGGGCCCTAACGGGc < 1:800809/148‑1 (MQ=255) gcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCTGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGc < 2:3127855/150‑1 (MQ=255) gcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGc < 1:6021306/150‑1 (MQ=255) gcgTTGGGGGGTGTGGGGAATGGCTGAAATCTCGAGTGCTTTGGCGACCGCTGCGCGTTCGTTCGCGGTT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGG‑GGTTTTACCCGCGAAAGGGCCCTAACGGGc < 1:2271027/150‑1 (MQ=255) ggggggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGG‑AAACCCCCACCTACGGGGTCCGCGCAAGGCACTGCAGATCCTGTAGGAGC‑GGGTTTAACCGCGAAAGGGCCCGAACGGGCCCcaa > 2:5181222/1‑150 (MQ=255) gggtTGGGGGGCATGGCTTAATTCTCGTGTGCGTTGGCGACCGCTGCGGGGTGGTTGGGGGTT‑AAACCCGCTCCTAGGGGGACCGCGCATGGCAGTGAAGTTCCTTTTGGTGG‑GGTTTTACCCGCGAAAGGGCCCTAACGGGCCCAAaga < 1:6379627/150‑1 (MQ=255) ggggTGTGGGGCACGGCTGAAATCTCGTGTGCGTTGGCGCCCGCTGCGGGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGAAAGGCTGTGCAGATCCTGTAGGAGG‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAaga < 1:429197/150‑1 (MQ=255) ggggTGTGGGGCAAGGATTAAATCTCGTGTGCGAGGGCGACCGCTGCGCGGTGGTTCGGGGTT‑AAACCCGCTCATACGGGGACCGCGAATGGCAGTGCTGATCCTGTTGGAGG‑GGTTTTACCCGCGAAAGGGCCCTAACGGGCCCAAaga < 1:6420795/150‑1 (MQ=255) gggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGG‑GAAACCCCCCCAACCGGGGCCCCGCCACGCCGTGCAGATCCGGTTGGAGC‑GGGTTTTACCCCGCAAGGGGCCCAACCGGCCCcaaaat > 1:3643501/1‑147 (MQ=255) gggCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCGCTCCAACCCGGACCCCGCAACGCCGTGCAGATACTGTAGGAGCGGGGTTTACCC‑CGCAAGGGCCCGAACGGGCCCCAAGAGGGTAAAg > 2:4030135/1‑150 (MQ=255) gCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGTGAAACCCCACCCAACGGGG‑CCCCGCCACGCCGTGCAGATCCTGTTGGAGC‑GGGTTTAAACCCGAAAAGGGCCCAAAGGGCCCAAATAGGATAAAGcc > 2:1429651/1‑150 (MQ=255) catgggtGAAATCTCGTTTGCGTTGGGTACCGCTGCGCGGTCTTTCGGGGTT‑AAACCCGCTCCTACGGGGACCGGGCATGGCAGTGCTGATCCTGTAGGTGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCt < 1:4135615/144‑1 (MQ=255) aGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGTTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTgg < 2:2228272/150‑1 (MQ=255) ggCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCGCTCCTTCGGGGACCGCGCCAGGCCGGGCAGATGCAGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCAAAAGGGCCCAAAGAGGATAAAGCCAGgc > 2:1748817/1‑150 (MQ=255) gCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGgcg < 2:6130165/150‑1 (MQ=255) gCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCAGgcg > 2:4272359/1‑150 (MQ=255) gCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCCCTCCAAAGGGGACCGCGCAAGGCAGTGCAGATACGGTAGGAGC‑GGGGTTAACCGCGAAAGGGCCCAAACGGGCCCCAAGAGGCTAAAGCCAGgcg > 2:4163380/1‑150 (MQ=255) tGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTAGCGGGT‑AAAACCGCACCTACGGGGGCCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTAACCGCGAAATGGCCCTAAAGGGCCCAAAGAGGAAAAATCATGgcgcg > 2:4766771/1‑149 (MQ=255) gAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCtt < 2:2997369/150‑1 (MQ=255) aattctcGTGTGCTTTGGCGACGGCTGGGCGGTCGTTCGCGGGT‑AAACCCGCTCATCCGGGGACCGCGCAAGGCTGTGCATATCCTGTAGGCGC‑GGTTTAACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:6874611/147‑1 (MQ=255) aaaTCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTAGGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:5432532/150‑1 (MQ=255) ctcGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGTT‑AAACCCGCTCCTACGGGGACCGCGAATGGCTGTGCAGATCCTGTTGGAGG‑GGTTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTg < 1:251779/150‑1 (MQ=255) tcGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑TAAACCCCAACAACCGGGACCGCGCAAGGCAGTGCAGATACAGTATGTTC‑GGGGTTTACCGCCAAAGGGCCCAAAAGGGCCCAAAAAGGATAAAACCAGGCGCGTAGTTGt > 1:7314639/1‑150 (MQ=255) cgcgTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 1:4163380/147‑1 (MQ=255) cGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:3990183/150‑1 (MQ=255) cGAGTGCGATGGCGACCGCGGCGCGGTCGTTCGCGGGT‑AACCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTCGGAGC‑GGGTTTACCCGCGAAAGGGCCCTACCGGGCCCAACGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:1007298/150‑1 (MQ=255) tGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCg < 2:5465308/150‑1 (MQ=255) tGGCGACCGCTGCGCGGTCGTTCGCCGGT‑AAAACCCCTCCTAACGGGCCCGCGCCACGCAGTGCAGCACCGGTTGGGGCGGGGTTTACCC‑CGAAAGGGGCCAAACCGGGCCCAACAGGTAAAAGCCGGGCGGGGAGTTGTagccccgccg > 2:4410907/1‑144 (MQ=255) cGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATc < 2:2801721/150‑1 (MQ=255) ccGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCAt < 1:4754675/150‑1 (MQ=255) gCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCa < 2:3593945/150‑1 (MQ=255) gCTGCGCGGTCGTGCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGAACGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCa < 1:3267093/150‑1 (MQ=255) ttCGGGGGT‑AAACCCGCCCCTACcggatctgccgtgccttgcgcgggccccgtcggtgggggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctccga < 2:2899779‑M1/150‑128 (MQ=255) ttCGCGGGA‑AAACCCGCTCCTACcgtttgtgcagggccttggggggtcccctttggtggggttttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccg < 2:3103548‑M1/150‑128 (MQ=255) gcgcgGGG‑AAACCCGCTCCTACGGGGCCCGCGCAAGGCAGTGCAGCTCCTGTCGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTc < 1:6585772/149‑1 (MQ=255) gcgGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtc > 2:6672871‑M1/1‑20 (MQ=255) cgGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagagttcagccttgccccacaccccccaacgccgctggtacctcccggtct > 2:6409925‑M1/1‑19 (MQ=255) gtt‑aaCCCCGCCCCTCCaggatctccccggccttgcgcggcccccgttggcgggggttaccccgcccacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctcc < 2:872287‑M1/148‑134 (MQ=255) gT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTg > 1:6264463/1‑150 (MQ=255) aCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTa > 2:5784045/1‑104 (MQ=255) aCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:5784045/104‑1 (MQ=255) cccGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatc > 1:4740021‑M1/1‑11 (MQ=255) cccGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatc > 1:5310273‑M1/1‑11 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCt < 2:3017340/150‑1 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCt > 1:2363395/1‑150 (MQ=255) | TGCCAGGACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAACGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCT > NC_002947/5932805‑5933101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |