| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,932,960 | T→A | 6.5% | intergenic (‑61/+92) | PP_5195 ← / ← fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,932,960 | 0 | T | A | 6.5% | 737.0 / 5.1 | 245 | intergenic (‑61/+92) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (98/121); new base A (15/6); total (117/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.25e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
GACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCA > NC_002947/5932811‑5933109 | gACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCT < 2:5685305‑M1/150‑1 (MQ=255) atcagcagCACTCTCAGTGGCAGCAGCAGCTAGGCGGCGATCTGGGAGACCGGGAGGTACCAGTTGCGTTGGGGGGTGTGGGGCAATGATTAAATCTCGTGTGCTATTTCGTCGGCTGCGCTGTCGTTCGCGGTT‑ATAGCCGATACTACg < 2:6275266/148‑1 (MQ=255) aacaGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACg < 1:7231295/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 1:6666378/150‑1 (MQ=255) cagcagCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGAGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACggg < 2:912739/150‑1 (MQ=255) cagcaCGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGAc < 2:404017/150‑1 (MQ=255) cTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCaa < 1:5879472/150‑1 (MQ=255) tCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAg > 2:5843022/1‑150 (MQ=255) cAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAgg < 1:4537540/150‑1 (MQ=255) gggCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAg < 1:3470374/150‑1 (MQ=255) gcagcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTGGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAggg < 1:1847468/150‑3 (MQ=255) gcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAg > 1:1958102/1‑150 (MQ=255) gcagcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAg < 2:1644179/150‑1 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtcc < 2:6089596‑M1/150‑27 (MQ=255) gcaCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATc < 1:2522684/150‑1 (MQ=255) aCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCt < 2:5005815/150‑1 (MQ=255) aCCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCt < 1:5565338/150‑1 (MQ=255) ccAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCGCTCCAACGGGGACCGCGCAACGCAGTGCAGATCCTg < 2:7197075‑M2/150‑2 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgt > 2:3924549‑M2/1‑148 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgt > 2:1958093‑M2/1‑148 (MQ=255) cAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCCGt < 1:1059874/150‑1 (MQ=255) aaGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgta > 2:472421‑M2/1‑147 (MQ=255) gcggcgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtagga < 1:6105136‑M1/150‑35 (MQ=255) gcggcgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtagga > 2:4326209‑M2/1‑144 (MQ=255) gcggcgATCAGGGAGACCGGGAGGTACCAGCGGCGTGGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtagga < 1:4368885‑M1/150‑35 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAACTCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgg < 2:3780536‑M1/150‑39 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgg < 1:3241789‑M1/150‑39 (MQ=255) cgATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgg > 1:2029127‑M2/1‑140 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcggg > 2:3399543‑M2/1‑139 (MQ=255) gATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcggg > 1:5310273‑M2/1‑139 (MQ=255) aGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggttta > 2:4322941‑M2/1‑135 (MQ=255) ggAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgg > 2:6781609‑M2/1‑133 (MQ=255) agaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAACTCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccg > 2:6409925‑M2/1‑131 (MQ=255) agaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccg > 2:6409951‑M2/1‑131 (MQ=255) agaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccg > 2:4439174‑M2/1‑131 (MQ=255) gaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgc > 2:6672871‑M2/1‑130 (MQ=255) gaCCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGAGGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgc > 2:4802937‑M2/1‑130 (MQ=255) tACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCGGGG‑AAAACCCCGCCAAACGGGACCCCGCCAAGCACTGGCGATACGGGGTGTGC‑GGGTGTTACCGCGAAACGGccc > 1:2804510/1‑150 (MQ=255) aCCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGCGCGGGT‑AAAACCCCTCCTAAGGGGACCGCGCCACGCACTGCAGATCCGGTAGGAGC‑GGGGTTAACCCCCAAAGGGccca > 2:3997872/1‑149 (MQ=255) cAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTGGGCGGGT‑AAAACCCCTCCAGCCGGGACCGCCCAACGCCGTGCAGAAACGGTTGGAGC‑CGGGTTAACCCCGAAATGGCCCaaa > 1:1774459/1‑150 (MQ=255) cggggggTTGGGGGGTGTGGGGCAAGGCTTAAATGTCGTGTGCGTTGGCGACCGCGGGGGGGTGTTTCGCGGTT‑AAACCCGCTCCTAGGGGTACCGCGCATGGCAGTGCATATCGTGTTGGAGG‑GGTTTTACCCGCGAAAGGGCCCTAA‑c < 1:6977013/144‑1 (MQ=255) gcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCTGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGc < 2:3127855/150‑1 (MQ=255) gcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGc < 1:6021306/150‑1 (MQ=255) gcgTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCCCCGGT‑AAAACCCCACCTAAGGGGACCCCCCAAAGCAATGCAGATACAGTAGGAGC‑GGGTTTACCCCCCAAAGGGCCCaaaacggc > 2:4206543/1‑145 (MQ=255) ggggggTGTGGGGCACGGCTGAACTCTCGTGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTCCGGGGCCCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCaaa < 1:4024838/150‑1 (MQ=39) ggggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTGGCGGGT‑TAAAACCCACCAACGGGGGCCCCGCAACGCCCTGGAGATACAGTAGGGGCGGGGTTTACCC‑CGCAAGGGCCCTAACCGGGCCCaaga > 1:5451365/1‑148 (MQ=255) ggggTGGGGGGCATGGCTTAATTCTGGTGTGGGTTGGCGACCGCTGCGGGGTGGTTGGGGGTT‑AAACCCGCTCCTACGGGGACCGCGCATGGCAGTGCAGATCCTGTTGGTGC‑GGTTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAaga < 1:6380036/150‑1 (MQ=255) gggTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGG‑GAAACCCCCCCAACCGGGGCCCCGCCACGCCGTGCAGATCCGGTTGGAGC‑GGGTTTTACCCCGCAAGGGGCCCAA‑CCGGCCCcaaaat > 1:3643501/1‑147 (MQ=255) gCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGTGAAACCCCACCCAACGGGG‑CCCCGCCACGCCGTGCAGATCCTGTTGGAGC‑GGGTTTAAACCCGAAAAGGGCCCAA‑AGGGCCCAAATAGGATAAAGcc > 2:1429651/1‑150 (MQ=255) aGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGTTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTgg < 2:2228272/150‑1 (MQ=255) ggCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAAACCGCTCCTTCGGGGACCGCGCCAGGCCGGGCAGATGCAGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCAAA‑AGGGCCCAAAGAGGATAAAGCCAGgc > 2:1748817/1‑150 (MQ=255) gCTGAATTCTCGAGTGCGTTGGCGACCGGTGCGCGGTCGTTCGGGGGT‑AAACCCGCTCCTACGGGGACCGCGCACGGCAGTGAATTTCCTGTTGGAGC‑GGTTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGgcg < 1:5100258/150‑1 (MQ=255) gAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCtt < 2:2997369/150‑1 (MQ=255) aattctcGTGTGCTTTGGCGACGGCTGGGCGGTCGTTCGCGGGT‑AAACCCGCTCATCCGGGGACCGCGCAAGGCTGTGCATATCCTGTAGGCGC‑GGTTTAACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:6874611/147‑1 (MQ=255) aaaTCTCTGGTGCGCTGGCGCCCGCTGCGGGGTGGTTCGCGGGT‑AAACCCGCTCCTCCGGGGACCGCGCAAGGCATTGCAGATCCTGTAGTAGC‑GGGTTTACCCGCGAAATGGCCCTAA‑CGGGCTCAAAGAGGATAATGCCTGGCGCTTa < 2:337286/150‑1 (MQ=255) aaaTCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 2:7285022/150‑1 (MQ=255) tatggAGTGGGTTGGGGACCGCTGCGCGGTCGTTCGCGGTT‑AAACCCGCTCCTCGGGGGACCGCGCAAGGCAGTGAATTTCCTGTAGGTGC‑GGTTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGtt < 1:4766771/146‑1 (MQ=255) cgcgTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 1:4163380/147‑1 (MQ=255) cGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:3967477/150‑1 (MQ=255) cGAGTGCGATGGCGACCGCGGCGCGGTCGTTCGCGGGT‑AACCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTCGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAC‑CGGGCCCAACGAGGATAAAGCCTGGCGCTTAGTTGTa < 2:1007298/150‑1 (MQ=255) gcgtgggCGACCGGTGCGCGGTCGTTCGCGGGT‑AACCCCGCTCCTACGGGGACCGCGCAAGGCAGGGCAGATCGTGTAGGCGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTagccag < 1:5658211/145‑1 (MQ=255) tGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCg < 2:5465308/150‑1 (MQ=255) cGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATc < 2:2801721/150‑1 (MQ=255) cGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATc < 2:402568/150‑1 (MQ=255) gCTGCGCGGTCGTGCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGAACGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCa < 1:3267093/150‑1 (MQ=255) ttCGGGGGT‑AAACCCGCCCCTACcggatctgccgtgccttgcgcgggccccgtcggtgggggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctccga < 2:2899779‑M1/150‑128 (MQ=255) ttCGCGGGA‑AAACCCGCTCCTACcgtttgtgcagggccttggggggtcccctttggtggggttttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccg < 2:3103548‑M1/150‑128 (MQ=255) gcgcgGGG‑AAACCCGCTCCTACGGGGCCCGCGCAAGGCAGTGCAGCTCCTGTCGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTc < 1:6585772/149‑1 (MQ=255) gT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTg > 1:6264463/1‑150 (MQ=255) gT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTg > 2:6741754/1‑150 (MQ=255) aaaCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGgc > 1:7442521/1‑150 (MQ=255) aCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTa > 2:5784045/1‑104 (MQ=255) aCCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTa < 1:5784045/104‑1 (MQ=255) cccGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatc > 1:4740021‑M1/1‑11 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTgg < 2:6442460/146‑1 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTgg > 1:6442460/1‑146 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCt < 2:3017340/150‑1 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCt > 2:3213872/1‑150 (MQ=255) cccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCt > 1:2363395/1‑150 (MQ=255) ccGCTCCTACaggatgtgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgtgatttgagccttggcccacacaacccatcgccgctggtacctcccggtctccctgatcg > 2:3726587‑M1/1‑10 (MQ=255) ccGCTCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcg > 2:4287507‑M1/1‑10 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcg < 2:4072949‑M2/150‑113 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcg < 2:2534080‑M2/150‑113 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcg < 2:1548730‑M2/150‑113 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcg < 1:2245198‑M2/150‑113 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCtt > 1:128630/1‑150 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCtt > 2:4967526/1‑150 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCtt > 2:4721927/1‑150 (MQ=255) ccGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTGAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCtt > 2:3544302/1‑150 (MQ=255) gCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGc > 1:6781382/1‑150 (MQ=255) tCCTACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcgccgc > 2:542251‑M1/1‑6 (MQ=255) tCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCg > 2:4853974/1‑150 (MQ=255) tCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCg > 2:3850324/1‑150 (MQ=255) cTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGc > 2:524115/1‑150 (MQ=255) tACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcgccgcctt > 2:6321131‑M1/1‑3 (MQ=255) tACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcgccgcctt > 2:1079468‑M1/1‑3 (MQ=255) tACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcgccgcctt > 2:2681801‑M1/1‑3 (MQ=255) tACaggatctgcactgccttgcgcggtccccgtaggagcgggtttacccgcgaacgaccgcgcagcggtcgccatcgcactcgagatttcagccttgccccacaccccccaacgccgctggtacctcccggtctccctgatcgccgcctt > 1:2742812‑M1/1‑3 (MQ=255) tACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCa > 2:6914944/1‑150 (MQ=255) tACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCa > 2:3238297/1‑150 (MQ=255) | GACAACAGCAGCACGCTCAGGGGCAGCAGCACCAAGGCGGCGATCAGGGAGACCGGGAGGTACCAGCGGCGTTGGGGGGTGTGGGGCAAGGCTGAAATCTCGAGTGCGATGGCGACCGCTGCGCGGTCGTTCGCGGGT‑AAACCCGCTCCTACGGGGACCGCGCAAGGCAGTGCAGATCCTGTAGGAGC‑GGGTTTACCCGCGAAAGGGCCCTAA‑CGGGCCCAAAGAGGATAAAGCCTGGCGCTTAGTTGTAGCCAGCCCGATCCATCAGGCGAATGGCTTCAGCCTGGCGCTTGCCGGCA > NC_002947/5932811‑5933109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |