| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,065,450 | T→G | 6.5% | intergenic (+81/+100) | PP_5311 → / ← PP_5312 | signal transduction protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,065,450 | 0 | T | G | 6.5% | 720.5 / 29.8 | 223 | intergenic (+81/+100) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (90/115); new base G (9/5); total (101/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.87e-01 | |||||||||||
Only 100 of 224 total aligned reads displayed.
TGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCAC > NC_002947/6065302‑6065598 | gAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTg < 2:1706682/150‑1 (MQ=255) catgcaagggattcaggacaagcacatccagatcaagggcaacccggcgctggtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTg > 2:4947941‑M1/134‑150 (MQ=255) aaCAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGc > 1:5049211/1‑150 (MQ=255) cAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGccc > 1:2085796/1‑150 (MQ=255) aaGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCACCTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCcg > 1:227842/1‑150 (MQ=255) gTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACGGTCTTGCTCAATGTCTAACAGCTGGCGCGAGTTTGGACTGTGGGAGCGGGCTTGCCcgcgc > 1:2479601/1‑149 (MQ=255) tGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGATCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGaa < 1:4526407/150‑1 (MQ=255) cTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCAAGCCcgctccca < 1:4280532/150‑6 (MQ=255) tCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCAGTAACACATAGCCGGCGGGAGCAACTGTCTTGCTCAATTTCGAACTGCTGGCGCGGTGGTGGACTGTGGGAGCGGGCGTGCCCGCGCaccc > 1:5770956/1‑148 (MQ=255) gAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCg < 2:4442973/150‑1 (MQ=255) aGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCgg > 2:3326912/1‑150 (MQ=255) tggaACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAg > 2:3941850/3‑150 (MQ=255) gagaACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAg > 1:5504749/1‑150 (MQ=255) atcacatccagatcaagggcaacccggcgctggtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGc > 2:1021488‑M1/114‑150 (MQ=255) aaCCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCg < 2:5737638/150‑1 (MQ=255) cTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTg < 2:7307850/150‑1 (MQ=255) gTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGcc < 2:1955802/150‑1 (MQ=255) ttGCGTTAGCTGGCTTCGCATTTACATGCACAGCATTAATCATTAAAACTTATCCTGAGGGATCAAATGTCTTGCTCAATTTCTAACATCTGGCTCGATTTTGGACTTTGGTAGCTGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa < 2:604252/150‑1 (MQ=25) tGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAt < 1:4873707/150‑1 (MQ=255) gCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATg > 1:6369348/1‑150 (MQ=255) gTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCa > 2:2196085/1‑150 (MQ=255) gTGAGCTGGCTTCGCAGTTCCAGGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCACCTGTCTTGCTCAATTTCTCACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCTTCGCCGGTgttcgcgg < 1:773685/150‑8 (MQ=37) tGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAc < 2:5289337/150‑1 (MQ=255) ggCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTc < 2:2813042/150‑1 (MQ=255) gCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCg > 1:6210058/1‑150 (MQ=255) cTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGc < 1:7229346/150‑1 (MQ=255) cTTCGCAGTTCCATGCACCGCATTAAGCATTAACACAGAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTACCCGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGc < 2:2899557/150‑1 (MQ=255) tCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTcaccg < 2:1229799/150‑5 (MQ=255) tCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCtt < 2:1481269/150‑1 (MQ=255) gCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTACCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGt < 2:7331145/150‑1 (MQ=255) gCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGt > 2:6074191/1‑150 (MQ=255) cAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGtt < 1:1921861/150‑1 (MQ=255) gTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGATGGCGCGATTTTGGACTGTGGGAGCCGGCTTGGCCGCCCACACCCGCCAACCCGGGGCCATGCACCCCGTCGCTTGTGTc > 1:107282/1‑150 (MQ=255) ttCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcg > 2:1518936/1‑150 (MQ=255) tCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGTCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgc < 1:1369367/150‑1 (MQ=255) tCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgc < 2:4225298/150‑1 (MQ=255) tCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgc < 1:592461/150‑1 (MQ=255) tCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgc < 1:7159524/150‑1 (MQ=255) ggtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgcg > 1:4728602‑M1/83‑150 (MQ=255) gtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagcaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCgg > 2:5810743‑M1/82‑150 (MQ=255) gtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCgg > 1:6936029‑M1/82‑150 (MQ=255) gtgatgtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCgg > 2:450847‑M1/82‑150 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCggg < 2:631404/150‑1 (MQ=255) gtggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACg < 1:1427793‑M1/74‑1 (MQ=255) tggttccaggggttgatgaaatacctgacaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGc > 1:2971694‑M1/76‑150 (MQ=255) tggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGc > 1:7197632‑M1/76‑150 (MQ=255) ccGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGc > 2:6196573/1‑150 (MQ=255) ccGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGc < 2:6872856/150‑1 (MQ=255) ggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGcc > 1:2487802‑M1/75‑150 (MQ=255) ggttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGCGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGcc > 1:7099689‑M1/75‑150 (MQ=255) gttccaggggttgatgaaatacctgaaaccatagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGccc > 2:3049608‑M1/74‑150 (MQ=255) gttccaggggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGccc > 2:1427793‑M1/74‑150 (MQ=255) gcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGccc > 1:964948/1‑150 (MQ=255) gcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGccc < 2:7063127/150‑1 (MQ=255) ttaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCt < 1:4884526/150‑1 (MQ=255) taagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTc < 2:6625757/150‑1 (MQ=255) taagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTc < 1:7404313/150‑1 (MQ=255) gcattaaCACATAGCCTGCGGGAGCAACTGTCCTGCTCAATTTCTAACAGCTGCCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCCCCca < 1:3455304/150‑1 (MQ=255) ggttgatgaaatacctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgcg < 1:1122632‑M1/68‑1 (MQ=255) acacATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTa < 1:7040422/150‑1 (MQ=255) aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGc < 1:3011827/150‑1 (MQ=255) tAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCg > 2:163641/1‑150 (MQ=255) gCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGtc < 1:6880641/150‑1 (MQ=255) cTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGtcat > 2:4032874/1‑150 (MQ=255) tGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGtcatc < 2:331632/150‑1 (MQ=255) ggAGCGACTGTCTTGCTCAATTTCTAACCGCTGGCGCGATTTTGGACTGTGGGAGTGGGCTTGCCCGCGACCACCGGCGAAGCCGGTGCCATGCACCGCGTCGATTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATcc < 1:3439674/150‑1 (MQ=37) ggAGCGACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGTAGTGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCAAAGGTAAAGCGTCATCATcc < 1:7178102/150‑1 (MQ=255) caaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCgg < 1:197114‑M1/69‑1 (MQ=255) cAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTcgcg > 1:5963601/1‑110 (MQ=255) ttGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTc < 1:3326912/150‑1 (MQ=255) ttGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTc > 2:2573306/1‑150 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTTTTTAGCGGGCCCGCCCGCGCCCACAGGGAAAGCCTCAACATCCCCCGCGGGCGTCAGc > 1:2631842/1‑150 (MQ=25) tCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGcc > 1:5316355/1‑150 (MQ=255) tCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGcc > 2:5960129/1‑150 (MQ=255) cAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 2:6743876/1‑150 (MQ=255) cAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTACCACAGGTAAATCGTCATAATACCCCTCGGGCTTCAGCCt > 1:5165020/1‑150 (MQ=25) aaattCTAACAGCTGGCGCGATTGTGGACTGTGGGAGCGGGCTTGCCCGCGAAAACCGGCGAATCCGGAGCCAAGCACCGCGTCGCGTGTTTCGCGGGCACGCCCGCGCCCACCCGTAAAGCGTCATAATCACCCTCGGGCTTCAGccgt > 2:3137689/4‑148 (MQ=21) aaCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt < 2:83160/150‑1 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTTCCCGCGAACACCCGCGAAGCCCGTGCCAAGCACCCCGTCGCTTGTTTAGCGGGCACCCCCCCGCCCACAGGTAAAGCGTCAACAAACCCCACGGGCGTCACCCATTCTTAttt > 1:1862311/1‑150 (MQ=21) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 1:347162/150‑1 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGACTTTAGTCttt > 2:236908/1‑150 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTg < 1:4032874/150‑1 (MQ=255) gCTGGCTCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGATCACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCTCAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGt < 2:5471679/150‑1 (MQ=255) gCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTAGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATACCCGTCGGGCTTCAGCCTTTCGTCTTTTGt > 2:2469357/1‑150 (MQ=255) gcgcGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa < 1:4606388/150‑1 (MQ=255) cgcgAGTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg < 1:1518936/150‑1 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAgg > 2:5507470/1‑150 (MQ=255) GGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCGTCAGCCTTTATTCTTTGGTTTCAGGTATTTCATCAAcccc < 1:3819782‑M1/150‑1 (MQ=255) GGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTATCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCACCCTTTCTTCTATGGTTTCAGGTATTTCATCAAcccc < 2:5124726‑M1/150‑1 (MQ=255) GGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt < 2:2658365‑M1/150‑1 (MQ=255) GGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt < 2:191635‑M1/150‑1 (MQ=255) GGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCGTGTTTCGCGGGCACGCCCGCTCCCACAGGGAAAGCGGCCTCCTCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGGATTTCATCAACCCCt < 1:4631591‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGTCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGa < 2:1016139‑M1/150‑1 (MQ=255) GCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGa > 1:4099242‑M1/1‑150 (MQ=255) CGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGaa > 1:4388746‑M1/1‑150 (MQ=255) CGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGaa < 2:3096387‑M1/150‑1 (MQ=255) GGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAc > 1:3151219‑M1/1‑150 (MQ=255) GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCCCGCCCGCGCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTGAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca < 1:454744‑M1/150‑1 (MQ=255) GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca < 2:3678675‑M1/150‑1 (MQ=255) GCTTGACCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCACACACACGTAAACAGTAATCAACCCCGAACGGCTTCATCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCAGGAaccc < 1:649234‑M1/150‑2 (MQ=255) | TGAACAAGGTGCTCGAGGCCGAGAACCTGTTGCGTGAGCTGGCTTCGCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCAC > NC_002947/6065302‑6065598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |