| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,131,950 | C→T | 5.6% | intergenic (+36/+31) | PP_5374 → / ← PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,131,950 | 0 | C | T | 5.6% | 808.1 / 24.3 | 250 | intergenic (+36/+31) | PP_5374/PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (108/128); new base T (7/7); total (115/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 256 total aligned reads displayed.
CCGGGTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCA > NC_002947/6131801‑6132099 | cccggTGGGCCCCATCCTATACCAGGGAATCACCCCCAAGGCAACACCCCGGTGGCTGGGCCCATGGCCAGCGAGGGGCTTTATATGGGGCTGACAGCGAAGAAATCCAACAAACCAAAAGCCACCCAGGAAAACACAAAACCCACAGcc > 2:3636601/4‑150 (MQ=255) gTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCa < 2:2253296/150‑1 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGcaga < 2:6053884/150‑4 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGt < 2:2697575/150‑1 (MQ=255) cTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCCTCAGCTGTCgg > 2:4370994/1‑150 (MQ=255) ttCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGt < 1:1334355/150‑1 (MQ=255) ttCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGt < 2:1946178/150‑1 (MQ=255) tCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAAACACAAGACCGACAGCTGATGGCTGTCGGTc < 2:5543708/150‑1 (MQ=255) ccTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCt < 1:6202246/150‑1 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAATACCGACAGCCATCAGCTGTGGGTGtt > 1:3143588/1‑150 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAAAACGACAGCCATCAGCGGTCGGTCtt > 1:5818480/1‑150 (MQ=255) ataCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 1:1970124/150‑1 (MQ=255) ataCCTGGGATTCACCCGATATTCATCACGCCGGTGTCTTGGCCATTGGCCTGCGAGGTGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 2:1618506/150‑1 (MQ=255) cTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGttt < 1:6904090/150‑1 (MQ=255) cTGCGATTCACCCGCAAGGCATCACGCCGGTGGCAGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCAAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGACTTGAGttt < 2:4031047/150‑1 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt < 2:1429425/150‑1 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt < 1:1031435/150‑1 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt > 1:6542509/1‑150 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt > 2:4675244/1‑150 (MQ=255) aTTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCTTGTGtcttccag < 2:2340020/150‑5 (MQ=38) ttCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCa > 2:2162193/1‑150 (MQ=255) tCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAg < 1:6610731/150‑1 (MQ=255) cccGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCGGTCGGGCGGGTGGTTTGGGCAGGCt > 2:3743034/1‑150 (MQ=255) cGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAt < 1:3636601/150‑1 (MQ=255) gCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGc < 1:4533513/150‑1 (MQ=255) gCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGc < 2:3303954/150‑1 (MQ=255) tCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCAcc > 1:4335278/1‑150 (MQ=255) tCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCAcc > 1:5704197/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 1:464344/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 2:1140323/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCGTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 1:3745228/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCAGCAGCTGTCGGGCTTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 1:898485/1‑150 (MQ=255) cGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGaa < 1:2116991/150‑1 (MQ=255) cGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGc < 2:6601211/150‑1 (MQ=255) cGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGc < 1:4521857/150‑1 (MQ=255) cGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGGTTTGGGCAGGCTATTTCTGCACCGAAGGc > 2:5816072/1‑150 (MQ=255) ggTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACCAGACCGACAGCCCTCAGCAGGCGGTCTTGTGTTTTGGTCAGGCTATTTGTGCACCGCAGGCa > 1:7077833/1‑150 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCgg < 1:6361087/108‑1 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGc < 2:1381486/150‑1 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGc < 1:5947843/150‑1 (MQ=255) tGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCa < 2:4622834/150‑1 (MQ=255) ggCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATc > 1:3987776/1‑150 (MQ=255) ggCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATc < 2:3934970/150‑1 (MQ=255) cccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCaa < 2:4311478/150‑1 (MQ=255) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCTtgt > 1:114450/1‑100 (MQ=37) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTGTTGTGTTTTGGGGAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc > 2:832721/1‑150 (MQ=255) gCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGTCCGCCAGCCATCAGCTGTCGGGGGTGTGTTTTGGGCAGGCTATTTCTGCACCGCAGGCAGGGCCCTCAACCAGTCCCgg > 1:5626575/1‑150 (MQ=255) gCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCgg < 2:4572492/150‑1 (MQ=255) gAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGCCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGaa < 1:2265294/150‑1 (MQ=255) gATATGGGGCTTACAGCGAAGAAAGCCAGCTAACATAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTATTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCAc < 1:5031076/150‑1 (MQ=255) atatGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAACGCAGGGCCAACAACCAGTCCCGGAACAGCCGCACg > 1:5003816/1‑150 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:6056947/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:1527115/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 2:4364829/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 2:1789096/150‑1 (MQ=255) tGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGa < 2:3893386/150‑1 (MQ=255) cAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGa < 2:5671892/150‑1 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGaa > 1:523469/1‑127 (MQ=255) gCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTGTTGTGTTTTTGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTACCGGAACAGCCGCACGCTTTCGCGAGGAcc > 1:5547486/1‑150 (MQ=255) gaagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCAACAGCATTCGGGGTTGTGTTTTTGGCAGGCTATTTGTGCACCGAAGGCAGGGCCAACAAACAGTCCCCGAAAACCCGCACCCTTTCACGAGGACCAc > 1:1481535/1‑150 (MQ=255) aagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACg > 1:6784122/1‑150 (MQ=255) aagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACg > 1:5384573/1‑150 (MQ=255) agaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGc > 2:6907395/1‑150 (MQ=255) agaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGc < 1:5740803/150‑1 (MQ=255) ccAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTg < 2:6751858/150‑1 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 2:5770838/150‑1 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 1:3870434/150‑1 (MQ=255) gCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac < 1:2344033/150‑1 (MQ=255) gCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac < 2:6956293/150‑1 (MQ=255) gCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac < 2:4163958/150‑1 (MQ=255) tAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgacga < 2:2506946/150‑1 (MQ=255) aCCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACt < 1:4599475/150‑1 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:3202612/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 1:4880883/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:1707794/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGAAAGCCATCAGCTGTCGGTCTTGTGTTTTTGGCAGGCTATTTATGCACCGAAGGCAGGGCCATCAAACAGTACCGGAACAGCCGCACGCTTTCACGAGGAACACGCTCGGTGGACGACTcc > 1:2282055/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGAACCACAGCCAACAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTATTCACCGAAGGCCGGGCCATCAACCAGTACCGGAACAGCCCCCCGCTTTAACGAGGGCCACGCACGGTGGACGACTcc > 1:3253987/1‑150 (MQ=255) tAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCAGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACCCTTTCACGAGGACCACGCTCGGTGGACGACTCca > 1:6487869/1‑150 (MQ=255) tAAAGCCACCCTGGAAGACACAAGACCCACACCCAACAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAACAGTCCCGGAACAGCCGCACGCGTTAACGAGGACCACCCGCGGTGGACGACAccc > 1:2016939/1‑149 (MQ=255) ccACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAgcagg < 1:2685613/150‑1 (MQ=255) aCCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAgcaggca < 1:771499/150‑1 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACtt < 2:5233801/150‑1 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACtt < 2:203697/150‑1 (MQ=255) caaaacacAAGACCGACAGCTGATGGCTGTCGGTCTTGTGTCTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTc < 2:52005/104‑1 (MQ=25) caaaacacAAGACCGACAGCTGATGGCTGTCGGTCTTGTGTCTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTc > 1:52005/5‑108 (MQ=25) cacaAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGt < 2:2417580/150‑1 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTc < 2:5979193/150‑1 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTc > 1:3442030/1‑150 (MQ=255) ccGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTg < 2:1564195/150‑1 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg > 1:478972/1‑150 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg > 2:1830586/1‑150 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:4383682/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 2:4533140/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:1364828/150‑1 (MQ=255) aCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAg > 2:6749528/1‑150 (MQ=255) aCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAg > 2:4896700/1‑150 (MQ=255) gCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc < 2:2798134/150‑1 (MQ=255) gCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc < 2:6546539/150‑1 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCAAACAACCAGTCCCGGAACAGCCGCACGCTATCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAcc > 2:6354847/1‑150 (MQ=255) cATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACca > 1:4925838/1‑150 (MQ=255) | CCGGGTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCA > NC_002947/6131801‑6132099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |