| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,131,953 | C→T | 5.4% | intergenic (+39/+28) | PP_5374 → / ← PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,131,953 | 0 | C | T | 5.4% | 825.7 / 23.4 | 258 | intergenic (+39/+28) | PP_5374/PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (113/131); new base T (7/7); total (120/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
GTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACAT > NC_002947/6131805‑6132102 | gTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCa < 2:2253296/150‑1 (MQ=255) tGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAg < 1:3417107/150‑1 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACTCTGGAAGACACAAGACCGACAGCCATCAGCTGt > 2:4118009/1‑150 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGt < 1:4092136/150‑1 (MQ=255) cgcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGt < 2:2697575/150‑1 (MQ=255) gcCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTc > 2:5947843/1‑150 (MQ=255) ttCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGt < 1:1334355/150‑1 (MQ=255) ttCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGt < 2:3927927/150‑1 (MQ=255) ttCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGt < 2:4533233/150‑1 (MQ=255) tCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAAACACAAGACCGACAGCTGATGGCTGTCGGTc < 2:5543708/150‑1 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAATACCGACAGCCATCAGCTGTGGGTGtt > 1:3143588/1‑150 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCtt > 1:2755180/1‑150 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAAAACGACAGCCATCAGCGGTCGGTCtt > 1:5818480/1‑150 (MQ=255) ataCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 1:1970124/150‑1 (MQ=255) ataCCTGGGATTCACCCGATATTCATCACGCCGGTGTCTTGGCCATTGGCCTGCGAGGTGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 2:1618506/150‑1 (MQ=255) ccTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACAAAAGACCGACAGCCATCAGCTGTGGGTCTTGTGtt > 1:6263734/1‑150 (MQ=255) cTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGttt < 1:6904090/150‑1 (MQ=255) cTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGttt > 1:4480147/1‑150 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 1:4621394/145‑1 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt > 2:4621394/1‑145 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt < 2:1429425/150‑1 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt > 1:6542509/1‑150 (MQ=255) tGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtttt < 1:1031435/150‑1 (MQ=255) aTTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCTTGTGtcttccag < 2:2340020/150‑5 (MQ=38) tCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAg < 1:6610731/150‑1 (MQ=255) cACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCg > 2:4823599/1‑131 (MQ=255) gCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGc < 1:4533513/150‑1 (MQ=255) gCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGc < 2:3303954/150‑1 (MQ=255) aTCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCAc > 2:6161879/1‑150 (MQ=255) tCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCAcc > 1:5704197/1‑150 (MQ=255) aCGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGa > 2:1140323/1‑150 (MQ=255) cGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGaa < 1:2116991/150‑1 (MQ=255) ccGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGGGGTTTGGGCAGGCTATTTCTGCACCGAAgg > 1:885452/1‑150 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCgg > 2:6361087/1‑108 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCgg < 1:6361087/108‑1 (MQ=255) tGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCa > 1:6785622/1‑150 (MQ=255) ccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGTCCGACGGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAc > 2:4311991/1‑150 (MQ=255) ccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACGGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAc > 1:373635/1‑150 (MQ=255) ccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAc < 1:7087142/150‑1 (MQ=255) tGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCa > 1:7324776/1‑149 (MQ=255) tGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCa < 2:7324776/149‑1 (MQ=255) ggCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGt < 2:6875560/150‑1 (MQ=255) gCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTc < 2:402179/150‑1 (MQ=255) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCTtgt > 1:114450/1‑100 (MQ=37) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc > 2:3645749/1‑150 (MQ=255) cTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc < 2:1937310/150‑1 (MQ=255) tGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCg > 1:4859996/1‑150 (MQ=255) gCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGTCCGCCAGCCATCAGCTGTCGGGGGTGTGTTTTGGGCAGGCTATTTCTGCACCGCAGGCAGGGCCCTCAACCAGTCCCgg > 1:5626575/1‑150 (MQ=255) gAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGCCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGaa < 1:2265294/150‑1 (MQ=255) gCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTACAGCCACCCTGGAAGACACAAGACCGACCGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGcc < 2:4171454/150‑1 (MQ=255) gATATGGGGCTTACAGCGAAGAAAGCCAGCTAACATAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTATTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCAc < 1:5031076/150‑1 (MQ=255) atatGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAACGCAGGGCCAACAACCAGTCCCGGAACAGCCGCACg > 1:5003816/1‑150 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:6056947/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 2:4364832/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 2:1789096/150‑1 (MQ=255) ggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 1:1527115/150‑1 (MQ=255) gACAGCGAAGAAAGCCAGCTAACCTACAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAg < 2:4530916/150‑1 (MQ=255) aCAGCGAAGAACGCCAGGGCACCTAAAGCCACCCTGGCAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTAGTTCTGCACCGGAGGCAGGGCCAGCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAgg > 2:3846885/1‑150 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGaa > 1:523469/1‑127 (MQ=255) gCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTGTTGTGTTTTTGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTACCGGAACAGCCGCACGCTTTCGCGAGGAcc > 1:5547486/1‑150 (MQ=255) gaagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCAACAGCATTCGGGGTTGTGTTTTTGGCAGGCTATTTGTGCACCGAAGGCAGGGCCAACAAACAGTCCCCGAAAACCCGCACCCTTTCACGAGGACCAc > 1:1481535/1‑150 (MQ=255) aagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACg > 1:5384573/1‑150 (MQ=255) agaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGc < 1:5740803/150‑1 (MQ=255) agaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGc > 2:6907545/1‑150 (MQ=255) gCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGt < 2:1361464/150‑1 (MQ=255) ccAGCTAACCTAAAGCCACCCTGGAAGACACAGGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTg < 2:6751848/150‑1 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 2:5770838/150‑1 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 2:5690629/150‑1 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga > 1:5967773/1‑150 (MQ=255) aGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGga < 1:3870434/150‑1 (MQ=255) gCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac < 1:2344033/150‑1 (MQ=255) tAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgacga < 2:2506946/150‑1 (MQ=255) aaCCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgacgac > 2:6018375/1‑150 (MQ=255) aCCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACt < 1:4599475/150‑1 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:3202612/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTcc > 2:1707794/1‑150 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGAAAGCCATCAGCTGTCGGTCTTGTGTTTTTGGCAGGCTATTTATGCACCGAAGGCAGGGCCATCAAACAGTACCGGAACAGCCGCACGCTTTCACGAGGAACACGCTCGGTGGACGACTcc > 1:2282055/1‑150 (MQ=255) tAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCAGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACCCTTTCACGAGGACCACGCTCGGTGGACGACTCca > 1:6487869/1‑150 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACtt < 2:203697/150‑1 (MQ=255) caaaacacAAGACCGACAGCTGATGGCTGTCGGTCTTGTGTCTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTc > 1:52005/5‑108 (MQ=25) aGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTgg < 2:1481535/150‑1 (MQ=255) acacAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCg < 2:464344/150‑1 (MQ=255) cacaAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGt < 2:2417580/150‑1 (MQ=255) cacaAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGt < 2:891906/150‑1 (MQ=255) aGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGt < 2:2155431/150‑1 (MQ=255) aGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGt < 2:661520/150‑1 (MQ=255) gACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTc > 1:3442030/1‑150 (MQ=255) aCCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCt < 2:5230208/150‑1 (MQ=255) aCCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCt > 1:3749783/1‑150 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg < 1:2022654/150‑1 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg > 2:1830586/1‑150 (MQ=255) cGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTgg > 1:478972/1‑150 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:1364828/150‑1 (MQ=255) gACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 1:4383682/150‑1 (MQ=255) gCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc < 2:2798134/150‑1 (MQ=255) gCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc < 2:6546539/150‑1 (MQ=255) cATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACca > 2:4941527/1‑150 (MQ=255) cATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACca > 1:4925838/1‑150 (MQ=255) aTCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACcac > 1:4175515/1‑150 (MQ=255) cAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCCCCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACAt < 2:5384573/150‑1 (MQ=255) | GTGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACAT > NC_002947/6131805‑6132102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |