| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,090 | G→A | 11.6% | intergenic (+60/‑228) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,090 | 0 | G | A | 11.6% | 482.8 / 41.1 | 175 | intergenic (+60/‑228) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (62/91); new base A (5/15); total (68/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
CGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTA > NC_002947/444942‑445236 | gTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGt < 2:5225953/150‑1 (MQ=255) gggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTcc < 2:4253561/150‑1 (MQ=255) ggCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCg > 2:7396498/1‑150 (MQ=255) cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTTCCCGCGAAATCGTCCGAt > 2:1958299/1‑150 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCa < 1:5059866/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCa < 1:6965211/150‑1 (MQ=255) gcccGAAGTCGAGCTCGGCGCAAAGGTCGTCACGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAg < 2:7380631/148‑1 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAg < 1:4873944/150‑1 (MQ=255) tccGAAGTCGAGCTCGGCGCAATGGTCGTCAAGGCATCCGACGATATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGa < 1:6048929/149‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGa < 1:1344302/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGa < 2:489887/150‑1 (MQ=255) ccGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGac > 1:3058587/1‑150 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGacaa < 1:2969090/150‑1 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGacaa < 1:2968317/150‑1 (MQ=255) aaGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGacaac < 2:5707975/150‑1 (MQ=255) cGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGacaaaattg < 1:2854562/150‑6 (MQ=38) gAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAttt < 1:3065745/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:3178896/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:3119841/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:7099497/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:886339/150‑1 (MQ=255) cTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGt < 2:6453282/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTc < 1:1982064/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTc < 1:7291508/150‑1 (MQ=37) ggCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTg < 1:2252286/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTc < 2:4172097/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTc < 1:7099225/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATc < 2:2511836/150‑1 (MQ=38) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGCCCGACCAGTCAAAATTGTTGTCTGATc < 2:4986473/150‑1 (MQ=38) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGGGTTCCCGCGAAGGCGTCCCATCCCAAAACAAATTTGTCTGGTggg > 2:2266153/1‑150 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 1:2553878/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 2:529268/150‑1 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 1:366722/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCggg < 1:3872606/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATCgga < 1:7396498/150‑2 (MQ=38) aGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 1:1835506/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:5462658/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:676530/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 1:834319/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:6329655/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:1151683/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTGGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:3829566/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCGACGCCTGACTACGTGCGTCATCCCCTATGTCCGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:6138653/150‑1 (MQ=255) gCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCggg < 2:3375278/150‑1 (MQ=18) cATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑c < 1:3283279/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa < 1:491128/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATGTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑Caa < 2:4590953/150‑1 (MQ=17) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑Caa < 1:1450621/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGCTCCCACAACAATGTTGTGGGGTCGGGCCGCGTCGCGGG‑CAAGc > 2:6108025/1‑150 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc < 2:1859994/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCCATCCGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc > 2:5560259/1‑150 (MQ=255) aaTGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCATGCCCGCGAAAGCCTCCCAACAGACAACAAATTTTTGTGGTCGGGCCGCGTCGCGGG‑CAAGCCCGcac > 2:3712836/1‑148 (MQ=255) cTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGGTTGCCC‑CGGAAGCGTCCCATCACACAACAAAATTGTATGGTGGGGGCGCGTAGCGGGCCAAGccccaccaac > 2:1309937/1‑143 (MQ=255) ttGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc < 2:635124/123‑1 (MQ=255) gCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTGCCCCCCCAGGCGGCCGGACAGACAAAAAAATTTTCTGGGCGGGCCGCGTAGCCGG‑CCAACCCCCACcaacaaag > 2:2243333/1‑148 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa > 2:3578260/1‑133 (MQ=255) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4764120/128‑1 (MQ=14) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg > 1:4764120/1‑128 (MQ=14) gACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTTCCCGCGAATGCGTCCGATAAGACAACAAATTTTTCTGGTCGGGGCTCATCGCGGG‑CAAGCCCGCGCCTACAAGGGTTTGtggcat > 2:5495386/1‑150 (MQ=255) cGCCTCAATACTCGCGTCAGCCCCGATTCCCGCGCCTGCCTTGTCGGCGG‑GGGCGGGCCCGCGAATGCGACCGATCAGACAACAATTTGGCCGGGTCGGCCCTCTTCGCGGG‑AAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAc < 2:1142345/150‑1 (MQ=255) ctcaaTACTTGCTTCAACCCCAATTTCACCCCCTGCCTTGTAGCACC‑GGGCTTGCCCGCGAATGCGACCTATAACAAAACAATTTTGTCTGGTCGGCCATCTCCGCGGC‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGa < 2:3050527/147‑1 (MQ=255) aaTAGTTGCGTCATCCCATATTACAGCGCCTGCCTTTTAGGTGC‑GGGCTTGCCCGCGAATGCGTCCGATAACACAAAAATTTTGTCTGGTCGGCCATCTTCGCGGC‑CAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGAttt < 2:6571125/150‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTGCCCGCGAAAGCGTCCCATCAGAGAACAAATTTTTGTGGGCGGGCCGCGTAGCGGG‑CCAGCCCCCGCCGACAAGGGTTTTTGGCCAGGCCAGACGTGTTTTCCCAttttagtg > 2:472796/1‑146 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGAt > 2:5011788/1‑54 (MQ=255) cccTATGCCCGCCCCTGCCTGGTCGGTGC‑GGGCTCCCCCGCGACGGCGTCCCACCCCACAACAATTTGGGGGGGGGGGCCCTCTCCGGGGG‑CACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGc < 2:5839519/150‑1 (MQ=255) cTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTGCCCCCGCATGCGTCCGATCACACAACAAGTTTGTATGGTCGGGGCTCATCCCGGG‑CAAGCCCCCTCCAACAAGGGTTTTGGGCATGGCATGAA‑AGGTTTGCCAATTTTCGTGGCGt > 2:6649409/1‑150 (MQ=255) gcgcCTGCCTTGTAGGAGG‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTGCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCa < 2:3589263/150‑1 (MQ=255) tgcctTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 2:6045311/150‑1 (MQ=255) gtgggggCTTGCCCGCGACGGCGGCCGATCTGACAACATTTTTGTCGGGGCGGGCCTGTTCGCGGG‑CACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:5560259/146‑1 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 2:3319172/1‑150 (MQ=255) gggCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTAGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCAATCCTTGACa > 2:1015402/1‑150 (MQ=255) ggacTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 2:7117287/4‑150 (MQ=255) cTTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaa > 2:4069210/1‑150 (MQ=17) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaag > 1:4489502/1‑149 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 2:1288618/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAAt < 1:1409642/120‑1 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAAt > 2:1409642/1‑120 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:6299926/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:6575726/1‑150 (MQ=255) cccGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:2674551/1‑150 (MQ=18) cccGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:7279635/1‑150 (MQ=18) cggctaaTGCGTCCGATCAGACAACAATTTGGTCTGGCCGGCCCTCTCCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 2:4838312/145‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTTACAGAAAGCTg > 1:2385463/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:761548/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060904/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060779/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1055672/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:292077/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3330314/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2765453/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2583834/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2393592/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1055666/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4012181/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACCATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:6181411/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:346914/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:6833130/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:353836/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCACGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 1:36385/150‑1 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 1:6533124/1‑150 (MQ=255) | CGGTGGGCAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCTTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTA > NC_002947/444942‑445236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |