| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,098 | T→C | 18.6% | intergenic (+68/‑220) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,098 | 0 | T | C | 18.6% | 409.8 / 70.0 | 177 | intergenic (+68/‑220) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (65/73); new base C (9/22); total (78/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTT > NC_002947/444949‑445246 | cAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑GTTCCCGCGAAATCGTCCGAt > 2:1958299/1‑150 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:5059866/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:6965211/150‑1 (MQ=255) aGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCa < 1:279328/150‑1 (MQ=255) gACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAg < 1:4873944/150‑1 (MQ=255) tccGAAGTCGAGCTCGGCGCAATGGTCGTCAAGGCATCCGACGATATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 1:6048929/149‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 2:489887/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 1:1344302/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 2:6706975/150‑1 (MQ=255) aCCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGa < 2:185383/150‑1 (MQ=255) ccGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGac > 1:3058587/1‑150 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGaca > 1:2247928/1‑150 (MQ=255) cGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGAGAAGaca > 2:526972/1‑150 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGacaa < 1:2968271/150‑1 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGacaa < 1:2968666/150‑1 (MQ=255) gAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGacaa < 1:2969090/150‑1 (MQ=255) aaGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGacaac < 2:5707975/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 1:3653367/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:886339/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:3119699/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:3178896/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:3360722/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 2:7099497/150‑1 (MQ=255) aGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAAtttt < 1:193683/150‑1 (MQ=255) tCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTc < 1:7291499/150‑1 (MQ=37) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTc < 1:7099225/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTCTGATc < 2:7421650/150‑1 (MQ=255) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATc < 2:2511836/150‑1 (MQ=38) gcAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGCCCGACCAGTCAAAATTGTTGTCTGATc < 2:4986473/150‑1 (MQ=38) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGG‑GTTCCCGCGAAGGCGTCCCATCCCAAAACAAATTTGTCTGGTggg > 2:2266153/1‑150 (MQ=255) aaaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCgg < 1:2553878/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCggg < 1:3872606/150‑1 (MQ=255) aaGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGACCAGACAAAATTGTTGTCTGATCgga < 1:7396498/150‑2 (MQ=38) tcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCctc < 1:3284679/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:5462658/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:6329655/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:4210712/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 1:3210419/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:1151683/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:6929687/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:3829470/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:633716/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCGACGCCTGACTACGTGCGTCATCCCCTATGTCCGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:6138653/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATGTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑Caa < 2:4590953/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGCTCCCACAACAATGTTGTGGGGTCGGGCCGCGTCGCGGG‑CAAGc > 2:6108025/1‑150 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTAGTGCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGc < 2:5508375/150‑1 (MQ=21) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc < 2:6444062/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCCATCCGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc > 2:5560259/1‑150 (MQ=255) cTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGG‑TTGCCC‑CGGAAGCGTCCCATCACACAACAAAATTGTATGGTGGGGGCGCGTAGCGGGCCAAGccccaccaac > 2:1309937/1‑143 (MQ=255) ttGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGc > 1:635124/1‑123 (MQ=255) gCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑GTGCCCCCCCAGGCGGCCGGACAGACAAAAAAATTTTCTGGGCGGGCCGCGTAGCCGG‑CCAACCCCCACcaacaaag > 2:2243333/1‑148 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa > 2:3578260/1‑133 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa < 1:3578260/133‑1 (MQ=255) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg > 1:4764120/1‑128 (MQ=14) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4764120/128‑1 (MQ=14) tcatcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTTGCCC‑CGCAAGCCTCCCAAAACACAAAAAATTTTTGTGGTGGGGGCGCATCGCCGG‑CCAACCCCCGACCACAACGGttttt > 2:2781714/1‑148 (MQ=255) tACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGG‑TTGCCCGCGAAAGCGTCCGGTCAGAGAACAATTTTTTGTGGTCGGGGCTCGTGGCGGG‑CAAGCCCCCTCCTAAAAGGGTTTGTGggatggcatg > 2:1082000/1‑150 (MQ=255) ccGCCTGAATACTTGCGTCATCCCCATTTGCCGCGCCTGCCTTGTAGGTGG‑GGGC‑TGGCCGGCTAATGCGTCGCATCACAAAACATTTTTGTCTGGGGGGGCCTCTCCGCGGG‑AACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGa < 2:6474100/149‑1 (MQ=255) cGCCTCAATACTCGCGTCAGCCCCGATTCCCGCGCCTGCCTTGTCGGCGG‑GGGC‑GGGCCCGCGAATGCGACCGATCAGACAACAATTTGGCCGGGTCGGCCCTCTTCGCGGG‑AAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAc < 2:1142345/150‑1 (MQ=255) aaTAGTTGCGTCATCCCATATTACAGCGCCTGCCTTTTAGGTGC‑GGGC‑TTGCCCGCGAATGCGTCCGATAACACAAAAATTTTGTCTGGTCGGCCATCTTCGCGGC‑CAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGAttt < 2:6571125/150‑1 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑GTGCCCGCGAAAGCGTCCCATCAGAGAACAAATTTTTGTGGGCGGGCCGCGTAGCGGG‑CCAGCCCCCGCCGACAAGGGTTTTTGGCCAGGCCAGACGTGTTTTCCCAttttagtg > 2:472796/1‑146 (MQ=255) cccTCTTCCCGCGCGTGCCTTGTGGGCGG‑GGGG‑TGGCCGGCGACTGGGTCCGACCAGACAACATTTTGGGGTGGGGGGGCCTCGTGGGGGG‑CCCGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGc < 2:2725063/150‑1 (MQ=255) cccTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGAt < 1:5011788/54‑1 (MQ=255) cccTATGCCCGCCCCTGCCTGGTCGGTGC‑GGGC‑TCCCCCGCGACGGCGTCCCACCCCACAACAATTTGGGGGGGGGGGCCCTCTCCGGGGG‑CACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGc < 2:5839519/150‑1 (MQ=255) ttCCGCCCCTGCATTTTAGGAGC‑GGGC‑TTCCCCGCGAATCCCTCCCAACACAAAAAAATTTTGTCTGCTCGGCCCACTTCGCGGG‑CAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAAt < 2:4011687/150‑1 (MQ=255) tgcctTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 2:6045311/150‑1 (MQ=255) tGTAGGAGC‑GGGC‑TCGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTGTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCa > 2:6809694/1‑150 (MQ=255) gtgggggC‑TTGCCCGCGACGGCGGCCGATCTGACAACATTTTTGTCGGGGCGGGCCTGTTCGCGGG‑CACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:5560259/146‑1 (MQ=255) gggC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 2:3319172/1‑150 (MQ=255) c‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaa > 2:4069210/1‑150 (MQ=17) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaag > 1:4489502/1‑149 (MQ=255) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaaa > 1:893790/1‑150 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAAt < 1:1409642/120‑1 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAAt > 2:1409642/1‑120 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:6575726/1‑150 (MQ=255) cccGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:7279635/1‑150 (MQ=18) cggctaaTGCGTCCGATCAGACAACAATTTGGTCTGGCCGGCCCTCTCCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 2:4838312/145‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTTACAGAAAGCTg > 1:2385463/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060779/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060922/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1055672/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1055666/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1799119/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2583834/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2393592/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:258968/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4012181/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3331389/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCATTGACAGAAAGCTg > 2:5312306/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:346914/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCACGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:36385/1‑150 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 1:6533124/1‑150 (MQ=255) aagaggcccGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTa > 2:6702489/8‑150 (MQ=21) gaggcccGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGGCAGAAAGCTGAGCTaaa > 1:7361797/6‑150 (MQ=21) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:7334347/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTCTGGTCGGGACTCTTCGCGGG‑CAATCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTTATCTAAACGTaa > 1:1587928/1‑150 (MQ=255) ccGACCAGACAAAATTGTTGTCTGATCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTCGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:3746877/1‑150 (MQ=38) gATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 1:2877807/1‑150 (MQ=255) aTCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:7173802/1‑150 (MQ=255) aTCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 2:616546/1‑150 (MQ=255) | CAAGACCGAAGTCGAGCTCGGCGCAAAGGTCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTT > NC_002947/444949‑445246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |