| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 445,125 | C→G | 11.9% | intergenic (+95/‑193) | PP_0367 → / → PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 445,125 | 0 | C | G | 11.9% | 609.4 / 63.7 | 203 | intergenic (+95/‑193) | PP_0367/PP_0368 | hypothetical protein/acyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (124/52); new base G (10/14); total (135/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.43e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.71e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
TCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCG > NC_002947/444978‑445272 | tcgtcAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCctc < 1:3284679/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 1:834319/150‑1 (MQ=255) aGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTcgcg < 2:5462658/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 1:1091651/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 2:6329655/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCgg < 1:3210419/150‑1 (MQ=255) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 1:1151683/150‑1 (MQ=18) ggCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:3829470/150‑1 (MQ=18) gCATCCGACGAAATGCTGGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACACTTTTGTCTGGTCGGGCCTCTTCGCggg < 2:4459994/150‑1 (MQ=255) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATGTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑Caa < 2:4590953/150‑1 (MQ=17) tCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACGTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑Caa < 1:1450621/150‑1 (MQ=17) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGCTCCCACAACAATGTTGTGGGGTCGGGCCGCGTCGCGGG‑CAAGc > 2:6108025/1‑150 (MQ=255) cgacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTAGTGCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGc < 2:5508375/150‑1 (MQ=21) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc < 2:1859994/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc < 2:6444062/150‑1 (MQ=255) gacgaAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCCATCCGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGcc > 2:5560259/1‑150 (MQ=255) cTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGCGGGGG‑TTGCCC‑CGGAAGCGTCCCATCACACAACAAAATTGTATGGTGGGGGCGCGTAGCGGGCCAAGccccaccaac > 2:1309937/1‑143 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa > 2:3578260/1‑133 (MQ=255) ccGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑Caa < 1:3578260/133‑1 (MQ=255) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg < 2:4764120/128‑1 (MQ=14) cGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCgg > 1:4764120/1‑128 (MQ=14) tcatcGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGCGTTGCCC‑CGCAAGCCTCCCAAAACACAAAAAATTTTTGTGGTGGGGGCGCATCGCCGG‑CCAACCCCCGACCACAACGGttttt > 2:2781714/1‑148 (MQ=255) cGCCTCAATACTCGCGTCAGCCCCGATTCCCGCGCCTGCCTTGTCGGCGG‑GGGC‑GGGCCCGCGAATGCGACCGATCAGACAACAATTTGGCCGGGTCGGCCCTCTTCGCGGG‑AAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAc < 2:1142345/150‑1 (MQ=255) ctcaaTACTTGCTTCAACCCCAATTTCACCCCCTGCCTTGTAGCACC‑GGGC‑TTGCCCGCGAATGCGACCTATAACAAAACAATTTTGTCTGGTCGGCCATCTCCGCGGC‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGa < 2:3050527/147‑1 (MQ=255) aaTAGTTGCGTCATCCCATATTACAGCGCCTGCCTTTTAGGTGC‑GGGC‑TTGCCCGCGAATGCGTCCGATAACACAAAAATTTTGTCTGGTCGGCCATCTTCGCGGC‑CAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGAttt < 2:6571125/150‑1 (MQ=255) tCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑GTGCCCGCGCATGCGTCCGGTCAGACAACAAATTTGTCTGGTCGGGCCACTTCGCGGG‑CAAGCCCCCGCCTACAAGGGTTTGTGGCATGGCAGGGC‑GGATTTTCCaaatttg > 2:6146892/1‑144 (MQ=255) tCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑GTGCCCGCGAAAGCGTCCCATCAGAGAACAAATTTTTGTGGGCGGGCCGCGTAGCGGG‑CCAGCCCCCGCCGACAAGGGTTTTTGGCCAGGCCAGACGTGTTTTCCCAttttagtg > 2:472796/1‑146 (MQ=255) cccTCTTCCCGCGCGTGCCTTGTGGGCGG‑GGGG‑TGGCCGGCGACTGGGTCCGACCAGACAACATTTTGGGGTGGGGGGGCCTCGTGGGGGG‑CCCGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGc < 2:2725063/150‑1 (MQ=255) tgcctTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 2:6045311/150‑1 (MQ=255) tGTAGGAGC‑GGGC‑TCGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTGTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCa > 2:6809694/1‑150 (MQ=255) gcgggggC‑TGGCCCGCTACTGCGTCCTAACACACAACATTTTGGTGTGGTCGGGCCGCCCCGCGGC‑CACCCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCtt < 1:7385648/146‑1 (MQ=255) gggC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACa > 2:3319172/1‑150 (MQ=255) gggC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTAGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCAATCCTTGACa > 2:1015402/1‑150 (MQ=255) c‑TTGCCCGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaa > 2:4069210/1‑150 (MQ=17) ttGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGaag > 1:4489502/1‑149 (MQ=255) cccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:6575726/1‑150 (MQ=255) cccGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:2674551/1‑150 (MQ=18) cccGCGAAGAGGCCCGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCt > 1:7279635/1‑150 (MQ=18) cggctaaTGCGTCCGATCAGACAACAATTTGGTCTGGCCGGCCCTCTCCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg < 2:4838312/145‑1 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:2393592/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:576494/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4012181/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:3331389/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060922/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 2:7060779/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:4314570/1‑150 (MQ=255) ccGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTg > 1:1055666/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACCATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:6181411/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 1:346914/1‑150 (MQ=255) cgcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCACGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa > 2:36385/1‑150 (MQ=255) cgcgAATGCGTCCGAACAGACAACAATTTGGTCTGGTCGGGCCTCTTCGCGGG‑CACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGa < 2:4964016/150‑1 (MQ=255) gcgAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAg > 1:6533124/1‑150 (MQ=255) aagaggcccGACCAGACAAAATTGTTGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTa > 2:6702489/8‑150 (MQ=21) aaTGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTa > 2:905094/1‑150 (MQ=255) gTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGt > 2:6952186/1‑150 (MQ=255) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:7334347/1‑150 (MQ=255) tCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTa > 2:1467553/1‑150 (MQ=255) ccGATCAGACAACAATTTTGTCTGGTCGGGACTCTTCGCGGG‑CAATCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTTATCTAAACGTaa > 1:1587928/1‑150 (MQ=255) ccGACCAGACAAAATTGTTGTCTGATCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTCGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTaa > 1:3746877/1‑150 (MQ=38) gATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 2:2571667/1‑150 (MQ=255) gATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGt > 1:2877807/1‑150 (MQ=255) aTCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGtt > 1:7173221/1‑150 (MQ=255) aGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACGGAAAGCTGAGCTAAACGTAAGTTTCa > 2:5347335/1‑150 (MQ=255) gACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:1404579/1‑150 (MQ=255) gACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa < 2:1404579/150‑1 (MQ=255) gACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaa > 1:3145237/1‑150 (MQ=255) acaacaATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa > 1:1720789/1‑150 (MQ=255) acaacaATTTGGTGTGGTCGGGCCTCTTCGGGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa < 2:6551341/150‑1 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCAc > 1:939381/1‑102 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa > 1:4870054/1‑148 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCaaa < 2:4870054/148‑1 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 1:1167857/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:5930103/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGATAAACGTAAGTTTCAaaca > 2:391376/1‑150 (MQ=255) aacaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAACGGTTTGTGGCAAGGCATGAC‑TGATTTGCCAATTTTATTGGCGTAAAAGGCACCATAGTCCATCCGTGACAGAAAGCAGAGCTAAACGTAAGTTTCAaaca > 1:6237276/1‑150 (MQ=255) aaaattgttGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaaca > 2:1876998/8‑150 (MQ=37) acaaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaa > 1:6297545/1‑150 (MQ=255) caaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa < 2:2149232/104‑1 (MQ=255) caaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATa > 1:2149232/1‑104 (MQ=255) caaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:1795399/1‑150 (MQ=255) aattgttGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAaacaac > 2:2616333/6‑150 (MQ=255) attgttGTCTGATCGGACGCATTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt < 1:5565529/146‑1 (MQ=38) aaTTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACt > 1:226269/1‑150 (MQ=255) ttttGTGGGGTGGGGCCTCTTCGGGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt < 2:78387/150‑1 (MQ=255) ttttGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCGATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGt > 2:5088642/1‑150 (MQ=255) tttGTCGGGGGGGGCCTCTGCGCGGG‑CACGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGtt < 1:2434898/150‑1 (MQ=255) ttGTCTGGGGGGGCCTCTTCGCGGG‑CAACCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGttt < 1:7364898/150‑1 (MQ=255) tCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGAt > 1:6917627/1‑150 (MQ=255) cTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATc < 2:7173221/150‑1 (MQ=255) ggTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCgg > 1:5267693/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:7005611/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:2346531/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:3017054/1‑150 (MQ=255) gTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGc > 1:4677201/1‑150 (MQ=255) gggCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTggcatggcat > 1:5087756/1‑50 (MQ=255) gggCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGTGCTAAACGTAAGTTTCAAACAACTGTTTGATCTGCTTc > 2:5220320/1‑150 (MQ=255) gggCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGc > 1:6000118/1‑114 (MQ=255) gggCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTc > 1:523042/1‑150 (MQ=255) ggCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTcc > 2:6839487/1‑150 (MQ=255) gCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCg > 2:3362461/1‑150 (MQ=255) | TCGTCAAGGCATCCGACGAAATGCTTGGCCGGATCATCGACACCTACGCCTGAATACTTGCGTCATCCCCTATTTCAGCGCCTGCCTTGTAGGAGC‑GGGC‑TTGCCCGCGAATGCGTCCGATCAGACAACAATTTTGTCTGGTCGGGCCTCTTCGCGGG‑CAAGCCCGCTCCTACAAGGGTTTGTGGCATGGCATGAC‑TGATTTGCCATTTTTCGTGGCGTAAATGGCACCATAGTCCATCCTTGACAGAAAGCTGAGCTAAACGTAAGTTTCAAACAACTGTTTGATCGGCTTCCG > NC_002947/444978‑445272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |