| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 546,010 | G→T | 6.3% | intergenic (+47/‑26) | rpoC → / → PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 546,010 | 0 | G | T | 6.3% | 906.6 / 35.5 | 286 | intergenic (+47/‑26) | rpoC/PP_mr08 | DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA |
| Reads supporting (aligned to +/- strand): ref base G (103/164); new base T (6/13); total (109/177) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
Only 100 of 287 total aligned reads displayed.
GCGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAAT > NC_002947/545863‑546159 | gcgagcgCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGaa < 1:1115261/150‑1 (MQ=255) gagcgCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAAt > 2:4382073/1‑150 (MQ=255) gcgcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGt < 1:4183881/150‑1 (MQ=255) cgcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGtt < 1:3546679/150‑1 (MQ=255) cgcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGtt < 1:1936816/150‑1 (MQ=255) gcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTg > 2:2221430/1‑150 (MQ=255) gcAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTg < 1:2398791/150‑1 (MQ=255) cAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGc < 2:1823544/150‑1 (MQ=255) cAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGc < 1:3230768/150‑1 (MQ=255) cAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGc > 1:2572860/1‑150 (MQ=255) cAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGc < 1:1338777/150‑1 (MQ=255) cAAGCGTCGCCGTGATGCCCACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCCGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCAGCGGCGACAGGAAATGTTGc > 2:195636/1‑150 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACCTGAAATGTTGcc > 1:3273821/1‑150 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGcc < 2:4003558/150‑1 (MQ=255) aaGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGcc < 2:311286/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACTGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGTCGCCga < 2:4259699/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCTATCATCGGCGACATGAAATGTTGCCga < 2:5904006/150‑1 (MQ=255) gCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCAACATTTCATGTCGCCga < 2:2108771/150‑1 (MQ=255) cGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat < 1:2287409/150‑1 (MQ=255) cGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgat < 2:2270270/150‑1 (MQ=255) gTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCgatg > 1:4915391/1‑150 (MQ=255) gCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATc < 1:1610820/150‑1 (MQ=255) cGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcgg < 1:5706866/150‑1 (MQ=255) aTGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGCCCGATCATCGGCAACATTTCATGTCGCCTATGATcgcccga < 1:710211/150‑6 (MQ=37) ccGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGa < 1:4808446/150‑1 (MQ=255) cGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAg > 2:7219607/1‑150 (MQ=255) gACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATcgggc > 1:445915/1‑143 (MQ=255) aCCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCgg < 2:831783/150‑1 (MQ=255) aCCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCgg > 2:539580/1‑150 (MQ=255) ccGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCggg < 2:2540660/150‑1 (MQ=255) gCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGc > 2:4821965/1‑150 (MQ=255) gCGTGAACGCGCCAGTGAAGTGGAAGCTGCACTGACCGACGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAACTGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTc < 1:3863436/150‑1 (MQ=255) aGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGa < 1:2845548/150‑1 (MQ=255) gcCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGTTAATTAAGTACAGGGCATGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGTTGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTg < 2:6318873/150‑1 (MQ=255) cAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTggg > 2:7278385/1‑150 (MQ=255) aaGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCaa < 2:4625831/150‑1 (MQ=255) aaGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCaa < 2:674591/150‑1 (MQ=255) ggggAAGCTGCCCTGACCGAAGCGCTGAATTCCCGCGGTAATTAAGTACAGGGCAAGGCCCCGGCACGCCGCGGGCGATCATCGGCGACATGAACTGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGa < 1:3729104/148‑1 (MQ=255) gTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGa > 2:339261/1‑150 (MQ=255) ggAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGTTATTTAAGTACCGGGCACGGCCCGGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 1:4363424/150‑1 (MQ=255) ggAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc < 2:5555943/150‑1 (MQ=255) ggAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATc > 2:6977703/1‑150 (MQ=255) gAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATcc > 2:3215442/1‑150 (MQ=255) aGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCctc < 2:5805190/150‑1 (MQ=255) gCACTGACCGAAGCGCTTAATTCCCGCGGTAATTAAGTCCAGGGCAAGGCCCCGGCAAGCCTCGGGCTATAATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTa < 1:5023266/150‑1 (MQ=255) gCACTGACCGAAGCGCTTAATACCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGAAATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTa < 1:6292849/150‑1 (MQ=255) tGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACt > 2:1460395/1‑150 (MQ=255) ccGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt > 2:3623589/1‑150 (MQ=255) ccGAAGCGATGAATTCCAGCGGTAATTAAGTACTGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtttt < 1:4709490/150‑1 (MQ=255) aaGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTa < 2:4220888/150‑1 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACtt < 2:2880800/139‑1 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTa > 2:115359/1‑150 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTa > 2:2418706/1‑150 (MQ=255) tGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCATa > 1:1247953/1‑150 (MQ=255) aaTTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTaaa > 1:6531571/1‑150 (MQ=255) ccAGCGGTAATTAAGTACCGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTg < 2:2622843/150‑1 (MQ=255) ccAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTg < 2:6559641/150‑1 (MQ=255) ctgCGGTAATTCAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg < 2:7152807/148‑1 (MQ=255) cAGCGTTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg < 1:3441772/150‑1 (MQ=255) cAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTgg < 2:858919/150‑1 (MQ=255) gCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTg > 1:6952696/1‑150 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 1:6709582/150‑1 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 2:4299065/150‑1 (MQ=255) cGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGa < 2:1221340/150‑1 (MQ=255) gTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTTCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAgg > 1:5786444/1‑150 (MQ=255) gTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAgg < 2:6171262/150‑1 (MQ=255) tACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGCCATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACATTTGTACCCTTAAATTTGGTGAGGCTCCGtctc > 1:3095588/1‑150 (MQ=255) aCAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCg < 2:5852740/150‑1 (MQ=255) cAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGc > 1:5585145/1‑150 (MQ=255) gCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGt > 2:6016682/1‑131 (MQ=255) gCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGt < 1:6016682/131‑1 (MQ=255) ggCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt < 1:7185773/150‑1 (MQ=255) ggCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATACTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt > 1:2181644/1‑150 (MQ=255) ggCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTGGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAAttttt < 2:2819359/150‑1 (MQ=255) ccccGGCACGCCTCGGGCGATCTTCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTgg < 1:806722/150‑1 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACCGGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGGGCAAGATCCGCGTGAGACTTTTGTACCCTTAAATTTGGTGAGGCGCCGTCTCGCCAAGTGTTgg > 1:6257477/1‑150 (MQ=255) ccccGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTgt < 1:6456668/150‑2 (MQ=255) ggCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCttt > 1:3882026/1‑150 (MQ=255) acgCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTGTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCtt < 2:3795909/148‑1 (MQ=255) aGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTg < 2:4986222/150‑1 (MQ=255) gCCTCGGGCGATCATCGGCGACATTAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAGTTTTTGGCTTTCTTGc > 2:1312962/1‑150 (MQ=255) cTCGGGCGATCATCGGCGACATGACCTGGTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCaa < 2:1730012/150‑1 (MQ=255) cTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCaa < 1:164319/150‑1 (MQ=255) cTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTATTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCaa < 2:3075150/150‑1 (MQ=255) gggCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGAc < 2:3703969/150‑1 (MQ=255) ggCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACa > 2:2695838/1‑150 (MQ=255) cGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAAt < 1:5644719/150‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 1:539580/150‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa > 1:4637369/1‑150 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 2:3875600/150‑1 (MQ=255) gATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATa < 2:5247182/150‑1 (MQ=255) atcatgGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTCTAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATag < 1:1835986/150‑1 (MQ=255) tcatcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCtt > 2:1602297/1‑137 (MQ=255) tcatcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATaga > 2:6693811/1‑150 (MQ=255) tcatcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATaga < 2:1349199/150‑1 (MQ=255) tcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc < 2:7108081/150‑1 (MQ=255) tcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc < 2:117851/150‑1 (MQ=255) tcGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTc < 1:3646309/150‑1 (MQ=255) ggCGACATTAACTGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGc < 2:1855461/150‑1 (MQ=255) aCATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGTTGAAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGATCAGTCTCGCCAATTTTTGTCTTTCTTGAAAGACAATATATTCTCAAGa > 1:5878918/1‑150 (MQ=255) | GCGAGCGCAAGCGTCGCCGTGATGCCGACAAACCGCTGCGTGTAAGCGCCAGTGAAGTGGAAGCTGCACTGACCGAAGCGCTGAATTCCAGCGGTAATTAAGTACAGGGCAAGGCCCCGGCAAGCCTCGGGCGATCATCGGCGACATGAAATGTTGCCGATGATCGGGCGGGGAGGGCCGGGGCCTCGTCTTGACTGGGTGCAAGATCCTCTTTAGACTTTTGTACCCTTAAATTTGGTGAGGCTCCGTCTCGCCAATTTTTGGCTTTCTTGCAAGACAATAGAGTCGCAAGACAAT > NC_002947/545863‑546159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |