| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 668,105 | G→C | 8.3% | intergenic (+66/+86) | yfhM → / ← PP_0571 | lipoprotein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 668,105 | 0 | G | C | 8.3% | 628.2 / 2.5 | 213 | intergenic (+66/+86) | yfhM/PP_0571 | lipoprotein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (89/98); new base C (21/2); total (110/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 214 total aligned reads displayed.
GCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATC > NC_002947/667958‑668254 | tCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAg < 2:919628/150‑1 (MQ=255) gAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcg > 1:6880236/1‑150 (MQ=255) aTCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAgcggc < 2:6880236/150‑1 (MQ=255) tCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAAgcggcg > 2:1217523/1‑150 (MQ=255) tGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGc < 1:2436817/150‑1 (MQ=255) aCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAATTAAAGCGGCGAAGCTGa > 2:5846280/1‑150 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGACGCTGaa > 2:6160602/1‑150 (MQ=255) ccGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaa < 1:7295200/150‑1 (MQ=255) cGGCCGAACCTGCTGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAACGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGaaa < 1:3549456/150‑1 (MQ=38) gCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGGGGGCGGGGGGGTGGGGCCGCCAAGCGGGCCCGCCAAATCAAGAGGCGAAGCAGAAAGc > 1:998758/1‑150 (MQ=255) ccGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGTGGGGGGCGCCAAGCGGGCCCGACAAATAAAGCGGCGGAGCGGAGAGcc > 1:1058815/1‑150 (MQ=255) gAACCTGCTGGCCGTGGGCTATTGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAATGTTTGGGAGCGGCCTTGCGTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 1:4056887/150‑1 (MQ=38) gAACCTGCTGGCCGTGGGCGATGGGCATGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGGGGGAGCGGCCTTGCGTCGCTATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTg < 1:4593004/150‑1 (MQ=38) gAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGGTAGGGCCGCCAAGCGGCCCCGGCCAATCAAACCGCGAAGCTGAAAGccag > 1:6096397/1‑148 (MQ=38) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:3675110/150‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:2346043/150‑1 (MQ=255) aaCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:2855357/150‑1 (MQ=255) aCCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCCAGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAATCAAGCGGCGCAGCGGAAAGCCAggg > 2:1268585/1‑150 (MQ=38) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGGGGCGCTAGGGGCGCCAAGCGGCCCCGCCCAATCAAGCGGCGAAGCTGAAAGCCGGGGgc > 1:2378000/1‑150 (MQ=255) cTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGGGGGGTTGGGCCGCAGAGGGGCCCCGGCCAGTCAAGCGGCGGAGCGGAAAGCCAGGGgc > 1:1217106/1‑150 (MQ=255) tGCAGGCCGTGGGCGTTGGGAATGGGTTGATGACGGTTAAAGCCCGCTAGAGACCCGCTCTACGCGGAACGTGTGGGAGCGGCCTTGCGTCGCTATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgct < 1:2702067/150‑1 (MQ=37) tGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGGGGGGCGCGGTAGGGCCGCAAAGCGGCCCCCCCACATCAAGCGGCGCCGCGGCAAGCCAGGGgcg > 1:6000246/1‑149 (MQ=255) tGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgct < 2:2415863/150‑1 (MQ=255) tGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGCAGCTGAAAGCCTGGGgcg > 2:2513572/1‑149 (MQ=255) cAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGgctgc < 2:1764724/150‑1 (MQ=255) aGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTAAAGCGGCGGAGCTGAAAGCCTGGGgctgct > 2:2610370/1‑150 (MQ=255) ggCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGctgctg < 2:4461537/150‑1 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCtag > 1:2962254/1‑139 (MQ=255) gCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCGACGCGGCCCCGACAAATCAAGCGGCGACGCTGAAAGCCTGGGGCTGCtgt > 2:6384791/1‑150 (MQ=39) ccGTGGGCGATGGGCATGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCGATCGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCtgtg < 1:4017241/150‑1 (MQ=255) cGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGGCGTGCGTGGCGATAGGGCCGCGAAGCGGCCCCCCCAATTCAACCGGCGGAGCTGAAAGGCGGGGGCGGCGGTGc > 1:517452/1‑150 (MQ=255) gTGGGCTTTGGTCATGGGGTTATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAAAGTGTGGGAGCGGCCTTGCTTCGCGATAGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:5371890/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTATAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATTGGGCCGAAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:1647751/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:7061674/150‑1 (MQ=255) gTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCa < 1:4147998/150‑1 (MQ=255) ggggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAg < 2:1336673/149‑1 (MQ=255) ggCGTTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGGGGAAAGGGTGGGAGCGGCCTTGCGCCGCGATCGGGCCGCAACGCGCCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGcc < 1:2029240/150‑1 (MQ=255) ggCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGAGGGAGCGGCCTAGCGACCCGAGAGGGCCCCAAACCCGCCCCGACAATTCAACCCCCCAACCTGAAAGCCAGGGCCTGCAGTGCAccc > 2:1078349/1‑150 (MQ=255) aTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGCGACCCGCTCTACGCGGAATGTGTGGGAGCGGCCTTGCGTCGCTATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTAGGGCTGCACAGCAGccccag < 2:3828080/150‑4 (MQ=37) aTGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTAGGGCTGCACAGCAGccccag < 2:7333706/150‑4 (MQ=38) tGGGCAAGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGCTAGGGCCGCAAAGCGGCCCCGACAATTCACGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTc < 2:4797630/150‑1 (MQ=255) gggCACGGGGAGATGACGGTGAACGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTGGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcg < 2:658675/150‑1 (MQ=255) gggCACGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcg < 2:2658352/150‑1 (MQ=255) gggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcg < 2:6682567/150‑1 (MQ=255) ggCAAGGGTATATGACGGTGAAAGCCCGATAGAGACCCGCTCTACGCGTAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcgc < 2:3136378/150‑1 (MQ=255) ggCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcgc < 2:4435336/150‑1 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTgg < 2:1730327/127‑1 (MQ=255) gCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCAGGGGCTGCGGTGCAGCCCTGTggcg > 2:226722/1‑150 (MQ=39) cacggggAGATGACGGTGAACGCCCGCTAGCGACCCGCTCTCCGCGTACAGTGTGGGCGCGGCCTGGCGTCGCGATAGGGCCGCAACGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 1:1492342/147‑1 (MQ=38) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 2:1118470/150‑1 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGa < 1:6774562/150‑1 (MQ=255) cAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCGCAAAGCGGCCCCCACAAATAAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTcgcgc > 2:130898/1‑149 (MQ=255) aaGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCCACAAATCAAGCGGCGACGCGGGAAGCCGGGGGCTGCTGTGCAGCCCTGTCGCGAc > 2:6880696/1‑150 (MQ=38) agaTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAgg < 2:618323/150‑1 (MQ=255) aTGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATATGGCCGCAAAGCGGCCCCCACAAATCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCAGTGGCGACGCAAGGcc > 2:4651876/1‑150 (MQ=38) tGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTg > 2:7279094/1‑107 (MQ=255) tGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCg < 1:1791847/150‑1 (MQ=255) gACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAAAAAAGCGGCGAACCTGAAAGCCAGGGGCTGCTGTGCAGCCCAGTAGCGACGCAAGGcccc > 2:2001908/1‑148 (MQ=38) aaGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATCAATCGGCGAAGCTTAAATCCTGGGGCTGCTGTGCAGCCCTGTCGCCACGCAAGGCCGCACCCACaa > 2:6999096/1‑150 (MQ=37) aGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAATACAAACGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCAGTCGCGTCCCAAGGCCGCTCCCACaaa > 2:876296/1‑150 (MQ=37) gCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCCACAAATCAAGCGGCGAAGCTGAAAGCCGGGGGCTGCTGTGCAGCCCGGTCGCGACGCAAGGCCGCTCCCACAAAg > 2:3669786/1‑150 (MQ=255) ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTAGCGAAGCAAGGCCGCTCCCACAAAGAc > 2:1917802/1‑150 (MQ=255) ccGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGGCGCGATAGGGCCCCAAAGCGGCCCCGACAAGTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGAc > 2:4255470/1‑150 (MQ=255) aCCCGCTCTACGGGTAATGTGTGGGAGGGGCGTTGCGTCGCGATCGGGCCGCAACGCGGCCCCGACAATTCAAGCGGGGAAGCTGAATGCCTGGGGCTGCTGTGCAGCCCTGTGGCGACGAATGGCCGCTCCCACTAAGACCGCGCAGAt < 2:7370599/150‑1 (MQ=255) cccGCTCTACGCGGAAAGTGTGGGAGCGGCCGTGCGGCGCGATAGGGCCCCCAAGCGGCCCCGACAAATCCAACGGCCAACCTGAAAGCCAGGGGCTGCTGTGCAGCCATGAAGCCAAGCACTGCCCCTCCCAACAAGACcgcccccaaa > 2:4138496/1‑143 (MQ=255) cGCTCTACGCGGAAAGTGTGGGAGCGGCCTTTCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAAATAAAGCGGCGAAGCTGTAAGCCTGGGGCTGCTGTGCCGCCCGGGCGCGAAGCAAGGCCGCGCCCACAAAGAACGCCCCGAGCAg > 2:1457216/1‑150 (MQ=25) cGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGGAAGCCGGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAATACCGCGCAGATCAg > 2:6058366/1‑150 (MQ=255) ctACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGGAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTggt > 2:4313295/1‑149 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCTTGCCTCGCGATAGGGCCGCAAAGCCGCCCCGACAAATCAAGCGGCGAAGCTGAAAGCCAGGGGCGGCGGTGCAGCCCGGTCGCGACGCAACGCCGCTCCCACAAAGACCGCGCACAACAGTgggt > 2:3393066/1‑148 (MQ=255) tACGCGGAAAGTGTGGGAGCGGCCGTGCCGCGCCGTAGGGGCGCCAACCCGCCCCCAAAAATAAAGCGGCCGAGCTGAAAGCCGGGGGCTGCGGTGGCGCCCCGTGGCGCCCCCAGGCCCCGCCCCCAAACACCCCGCCGATCCGTgggg > 2:1840124/1‑148 (MQ=255) gAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAATCGGCGAAGCTGAAATCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCATTGGATCACCCAGCTCATCAcc > 1:5515666/1‑150 (MQ=255) ggCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCcaca > 1:5794158/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:2564907/1‑150 (MQ=255) gCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAg > 2:114014/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 2:4785919/1‑150 (MQ=255) ttGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCAGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGccc > 1:2204640/1‑150 (MQ=255) gggTCGCGTTTGGGCCGCACCGCGGCCCCGACAATTCACGGGGCGAATCTGAAAGCGTGGGGCTGGTGTGCAGCCCTGTCGCGACGCATGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa < 2:4605938/148‑1 (MQ=255) gCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCa > 2:3620203/1‑150 (MQ=255) tCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCa > 1:4512097/1‑150 (MQ=255) cgtttgggCCGCAATGCGGCCCCGACAATTCACGCGGCGATGCTGAACGCCGGGGGCTGGTGTGCAGCCCTGTCGCGACGCATGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAcca < 2:5175976/145‑1 (MQ=255) aTAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagc > 2:2741383/1‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca > 1:6341718/2‑150 (MQ=255) cggcccGCAACGCGGCCCCGACAATTCACGCGGCGAAGCTGAACGCCTGGGGCTGTTGTGCAGCCCTGTCGCGACGAAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagcca < 2:7122563/146‑1 (MQ=255) gggCCGCTTTGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCAccagccag > 2:5805860/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAga > 1:7242805/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGACGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACAAGCCAga > 1:6457966/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 2:2365238/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 1:5070682/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 2:6770743/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgat > 1:2122623/1‑150 (MQ=255) ccGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatg > 2:3144783/1‑150 (MQ=255) cGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAgatga > 2:2481666/1‑150 (MQ=255) cAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGAtt > 1:3464156/1‑150 (MQ=255) aaaGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTc > 2:6871482/1‑150 (MQ=255) gcgcCCCCCACAATCCCCGCGGCGACGCTGACCGCCGGGGGGGGCGGCGCCGCCGTGCCGCCACGCACGCCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGa < 1:4177512/150‑1 (MQ=255) cGGCCCCGAAAATTCCGGCGGCGAAGCTTAAAGCCTGGGGGTGGTGTGCAGCCCTGGGGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAg < 2:6277393/150‑1 (MQ=255) gCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGga > 2:332925/1‑150 (MQ=255) ccccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgat < 1:2741383/150‑1 (MQ=255) ccGACAATTCACGGGGCGCAGCTCAAAGCGTGGGGCGGCTGTGCAGCCCTGTCGCGCCGAAAGCCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga < 1:6160602/150‑1 (MQ=255) ccGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGgatga > 2:2952750/1‑150 (MQ=255) | GCCGCAGGTCGAATCGATGTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCAAAGCGGCCCCGACAATTCAAGCGGCGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATC > NC_002947/667958‑668254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |