| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 747,421 | C→T | 5.4% | intergenic (‑545/‑249) | PP_0638 ← / → PP_5448 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 747,421 | 0 | C | T | 5.4% | 959.1 / 28.0 | 296 | intergenic (‑545/‑249) | PP_0638/PP_5448 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (144/136); new base T (5/11); total (149/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 319 total aligned reads displayed.
CCCAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTC > NC_002947/747272‑747570 | cccAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAcc > 2:4308920/1‑150 (MQ=255)cccAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAcc > 2:3064067/1‑150 (MQ=255) cAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAcccc > 2:5137107/1‑150 (MQ=255) cAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAcccc > 1:4406574/1‑150 (MQ=255) aaCGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAccccc > 1:1956814/1‑150 (MQ=255) aaCGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAAccccc > 2:466336/1‑150 (MQ=255) gCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTgg < 1:1424087/150‑1 (MQ=255) gCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTgg < 2:5600997/150‑1 (MQ=255) gCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTgg < 1:2754062/150‑1 (MQ=255) gTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGa > 1:2050178/1‑150 (MQ=255) gTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGa < 2:6698713/150‑1 (MQ=255) gCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGtt < 2:7209241/150‑1 (MQ=255) cTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTg > 1:6811589/1‑150 (MQ=255) tCGCACCTGAGCTTGATCTACGCGGTCTCTGGGAATCTTCAAATAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGCCGCCACTGACTGTCTCTCAAATCCCAGCAGCGTCCTGTGGCCAACCCCCATCCTGGGGGTTgg > 2:5518171/1‑150 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCg > 2:6975583/1‑150 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCg < 2:5462145/150‑1 (MQ=255) tGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAtttt > 1:710263/1‑150 (MQ=255) gAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAttttt > 1:5890088/1‑150 (MQ=255) cTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgtt < 1:5269958/150‑1 (MQ=255) cTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgtt < 2:6166453/150‑1 (MQ=255) tGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTgg < 1:4177841/150‑1 (MQ=255) gATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGa < 1:4317277/150‑1 (MQ=255) gATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGa < 2:7410264/150‑1 (MQ=255) aTCTCCGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAg < 2:215141/150‑1 (MQ=255) aTCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAg < 1:7186858/150‑1 (MQ=255) tCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAgg < 2:2287837/150‑1 (MQ=255) tACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGa > 2:6838781/1‑150 (MQ=255) tACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGa > 1:1491905/1‑150 (MQ=255) aCGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACTCCCAGGATGGGGGTTgg < 2:786751/131‑1 (MQ=255) aCGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACTCCCAGGATGGGGGTTgg > 1:786724/1‑131 (MQ=255) gTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATg > 2:2068311/1‑150 (MQ=255) ttCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGa < 1:4081702/150‑1 (MQ=255) tGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCCTACTGTGGCCACCCCCCATCCTGGGAGGTGGCGAGGGTGGTTGGAGGGACGCTGacaccc > 2:4927879/1‑148 (MQ=255) tGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGacacac > 1:1770429/1‑150 (MQ=255) gggACTCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGGATAGTGTGGCCTACCCCCTTGCTGGGAGTTGGCGATTGTTGTTGGAGGGACGATGTCACACg > 2:6606542/1‑150 (MQ=255) gggAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACg > 1:1279186/1‑150 (MQ=255) ttCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAatcat > 2:1695423/1‑150 (MQ=255) tCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACCCGAAatcatc < 2:4544247/150‑1 (MQ=255) tCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAatcatc < 1:2945708/150‑1 (MQ=255) cAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCg < 2:73339/150‑1 (MQ=255) aaaaaaCCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCgg < 2:3960447/150‑1 (MQ=255) cACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGt < 2:5285783/150‑1 (MQ=255) cTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGtag < 2:1071409/150‑3 (MQ=255) cTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTgg > 1:4784182/1‑150 (MQ=255) aTTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACt > 1:6031123/1‑150 (MQ=255) ccGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCAt > 2:4895697/1‑150 (MQ=255) gTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTagga < 1:5477800/150‑1 (MQ=255) gTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTagga < 2:5906370/150‑1 (MQ=255) gTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTagga < 1:61970/150‑1 (MQ=255) gTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTagga < 1:2792573/150‑1 (MQ=255) gTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGACCACTCACCATGTagga < 1:5567406/150‑1 (MQ=255) aTTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAggagga > 1:869655/1‑150 (MQ=255) ggAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTcc > 2:3455465/1‑150 (MQ=255) ggTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTa < 2:3722221/150‑1 (MQ=255) gtgtAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTAt > 2:4714150/1‑150 (MQ=255) tAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATgag > 1:6322873/1‑150 (MQ=255) tAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATga > 2:5727473/1‑149 (MQ=255) tAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATga < 1:5727473/149‑1 (MQ=255) tAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGGTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATgag > 2:5854303/1‑150 (MQ=255) acgacgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGaa > 1:6554580/1‑150 (MQ=255) acgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACgg < 2:6253615/150‑1 (MQ=255) gCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGtt < 2:2894875/150‑1 (MQ=255) actgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttg > 2:1868817/1‑150 (MQ=255) actgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttg < 1:5973937/150‑1 (MQ=255) actgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTtgttgt < 1:5784477/150‑1 (MQ=255) tgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTgtgt < 1:466336/150‑1 (MQ=255) tgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTgtgt > 1:39577/1‑150 (MQ=255) tgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGGTTTGTTgtgt > 1:3779991/1‑150 (MQ=255) tgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCAGGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTgtgt > 2:5332741/1‑150 (MQ=255) tCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCt < 2:6443430/150‑1 (MQ=255) aCTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTg < 2:6775499/150‑1 (MQ=255) aCTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTg < 2:1484968/150‑1 (MQ=255) cTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTgg > 2:4427643/1‑150 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg < 1:3613502/150‑1 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg > 1:3384217/1‑150 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg > 1:5058925/1‑150 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg > 2:3154443/1‑150 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg > 1:957831/1‑150 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTggg < 2:2492596/150‑1 (MQ=255) aaaTCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCt > 1:2215196/1‑150 (MQ=255) cATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTT‑GGCTTGCAAGt > 1:1867340/1‑150 (MQ=255) aTCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGacac > 1:3068935/1‑65 (MQ=255) aTCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGt > 1:2678438/1‑150 (MQ=255) aTCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGt > 1:1005382/1‑150 (MQ=255) gCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAg > 1:453044/1‑150 (MQ=255) cATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAgg > 2:4283230/1‑150 (MQ=255) cATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAgg > 1:5315122/1‑150 (MQ=255) aCTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCtt < 2:1289812/150‑1 (MQ=255) tgtgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCt < 1:4989213/150‑1 (MQ=255) tgtgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCt > 1:3674024/1‑150 (MQ=255) tgtgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCt < 1:1989521/150‑1 (MQ=255) tgtgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGAAAGTGCAGGCTTCt > 1:4597934/1‑150 (MQ=255) tgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgt < 2:2109865/150‑1 (MQ=255) gCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgtgt < 1:326256/150‑1 (MQ=255) ccAACTCCCAGGATGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCtt > 2:6078157/1‑123 (MQ=255) ccAACTCCCAGGATGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgtgtg > 1:486210/1‑150 (MQ=255) ccAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgtgtg < 1:2444627/150‑1 (MQ=255) cAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTagga > 1:6707272/1‑88 (MQ=255) cAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTgg > 2:2606011/1‑150 (MQ=255) ccccATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGctc > 1:2560388/1‑150 (MQ=255) | CCCAACGGGGGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTC > NC_002947/747272‑747570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |